mrps12 (mrps12)


Basic Information

Item Value
gene id mrps12
gene name mrps12
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37725589 ~ 37730066 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806379.1
TCCGGAAGCACTTTTGTGTTGACGGAATTACTTCCGGTACACATGTTTCTCACGTTAGGATGTGAAGTCCTTGGTTGATTTCTTTACTCAAAATGCGATAAATAGCCTcatatacacaaaaaaataccGTTTTTTTGTAACCGGATATTCTCTGATAATCTGACGGTGGCGGCAGTTTGTCCGGGATACTCTGAGCCGGAATGTCGTCATTATGGAGCCTGAGACCGGTGCTGACGTCACTGCTTCAAGCTTCCCAGCATGCCTCTGGCTGGACGGGTCCCATCCTCTCCAGGACGATGGCCACCCTCAACCAGATGCACCGCCAGGGGAAACCCAAACCGCCTCCGAAATCTGTCGGCGCCACGTTCGGCCGCCCCCAGCTGAAGGCGGTGGTCCTGAAGACCATGATCCGGAAGCCCAAGAAGCCCAACTCTGCCAACAGGAAGTGCGCTCGCGTGCGTCTGTCTAACGGGAAGGAGGCCGTGGTGTTCATCCCCGGGGAGGGACACAACCTGCAGGAGCACAACGTGGTGCTGGTGGAGGGGGGCAGGACGCAGGATCTGCCCGGGGTCAAACTCAAAGTGGTCCGAGGGAAATATGACTGTGGCCACGTAGTGAAGAAGAAACAGTAGATGCTGCTGTGATGGAAACGTGTGTTTGATAAAGTTGttgttgaataaataaatacatacatgtgCTAAAAGTCA

Function

symbol description
mrps12 Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be part of small ribosomal subunit. Predicted to be active in ribosome. Orthologous to human MRPS12 (mitochondrial ribosomal protein S12).

NR:

description
PREDICTED: 28S ribosomal protein S12, mitochondrial-like isoform X1

GO:

id name namespace
GO:0006412 translation biological_process
GO:0015935 small ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02950 RP-S12, MRPS12, rpsL; small subunit ribosomal protein S12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806379.1 True 707 mRNA 0.52 3 37725589 37730066

Neighbor

gene id symbol gene type direction distance location
LOC120562468 NA coding downstream 30183 37693717 ~ 37695406 (-)
LOC120562948 NA coding downstream 39976 37682235 ~ 37685613 (-)
LOC120562949 NA coding downstream 50576 37672821 ~ 37675013 (-)
LOC120562467 NA coding downstream 82698 37640039 ~ 37642891 (-)
LOC120561711 NA coding downstream 93510 37629707 ~ 37632079 (-)
si:dkey-11p23.7 NA coding upstream 121095 37851161 ~ 37854822 (-)
LOC120563013 NA coding upstream 481754 38211820 ~ 38230481 (-)
dcst1 NA coding upstream 499492 38229558 ~ 38250551 (-)
LOC120563006 NA coding upstream 595216 38325282 ~ 38327753 (-)
LOC120563000 NA coding upstream 605418 38335484 ~ 38337715 (-)
G79419 NA non-coding downstream 66270 37658532 ~ 37659319 (-)
G79241 NA non-coding downstream 175348 37516756 ~ 37550241 (-)
G79431 NA non-coding upstream 1705 37731771 ~ 37732474 (-)
G79441 NA non-coding upstream 28135 37758201 ~ 37758821 (-)
G79443 NA non-coding upstream 49298 37779364 ~ 37831558 (-)
G79433 NA non-coding upstream 66750 37796816 ~ 37797945 (-)
G79448 NA non-coding upstream 96758 37826824 ~ 37866047 (-)
LOC120561551 NA other downstream 206195 37492800 ~ 37519394 (-)
LOC120562574 NA other downstream 490460 37088824 ~ 37235129 (-)
kiaa0319 LOC103370079 other downstream 830951 36867667 ~ 36894638 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other downstream 977351 36664542 ~ 36748238 (-)
creb3l4 NA other downstream 1366009 36339081 ~ 36359580 (-)
LOC120562472 NA other upstream 14018 37744084 ~ 37796766 (-)
LOC120562474 NA other upstream 228383 37958449 ~ 37971348 (-)
G79484 NA other upstream 333632 38063698 ~ 38221760 (-)
LOC120562477 NA other upstream 410403 38140469 ~ 38205182 (-)
LOC120562482 NA other upstream 588878 38318944 ~ 38324284 (-)

Expression


Co-expression Network