apoc4


Basic Information

Item Value
gene id apoc4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 25495718 ~ 25496646 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806411.1
TGACCATATGATTTGGACCAATGTACAAGCTGTTACTCTCActcaatacaaataaaatagatTGATAACACTTGTTTTATTCAACTTCTGTTGACCAGAGCCAGAGGAAAAGATGCATATgaaagaacttgtttttggtCTCATCTTACTGATGCAAGCATGTGAACCACTTTTGGCCCAGTCACCGGCCCCGATACAACCCAACTCTCCAGGAATACTGCAGAGGCTGGCAGAGAAAACCAGGGAAGCCACAGCTACAGTCAAACATCTGAGGGGCTTTATTGGTACCTACTATGAAGACCACATCCAACCAGTGACTGACAGCTACTTTGAATGGGCCACTAATGTCAAAAGCTCTGTGTGGGAGAAGATCCAGACAACCATTGACAAACTCATACCAATGAAAGCAACTAATCAAACGGCTCAACCCAgtcaaatatgaagaaaagcTGACAATAAATGAATACTCTTACCATTCTTA

Function

NR:

description
uncharacterized protein LOC110537931

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806411.1 True 481 mRNA 0.42 4 25495718 25496646

Neighbor

gene id symbol gene type direction distance location
apoeb NA coding upstream 7826 25485559 ~ 25487892 (+)
LOC120562741 NA coding upstream 15011 25479261 ~ 25480707 (+)
tomm40 tomm40,LOC106917673,LOC103139243,LOC107083531 coding upstream 51889 25436838 ~ 25443829 (+)
ddx61 LOC104962676,LOC102800138,LOC100698984,LOC101488107,LOC104927343 coding upstream 59447 25422850 ~ 25436271 (+)
bcl3 bcl3 coding upstream 73146 25400240 ~ 25422572 (+)
apoa2 NA coding downstream 1044 25497690 ~ 25499464 (+)
LOC120562605 LOC104951102 coding downstream 9805 25506451 ~ 25510293 (+)
cited4b LOC104958901,LOC106523762 coding downstream 378031 25874677 ~ 25877640 (+)
LOC120563139 LOC106907557,LOC103141567,LOC106948827,LOC107084787,LOC103477829,LOC102227399,LOC102310127,LOC102211983 coding downstream 534117 26030763 ~ 26044380 (+)
themis2 NA coding downstream 554007 26050653 ~ 26058431 (+)
G75977 NA non-coding upstream 148502 25346263 ~ 25347216 (+)
LOC120561670 NA non-coding upstream 159760 25335016 ~ 25335958 (+)
G75943 NA non-coding upstream 350914 25144579 ~ 25144804 (+)
G75942 NA non-coding upstream 351444 25144058 ~ 25144274 (+)
G75941 NA non-coding upstream 379961 25115556 ~ 25115757 (+)
G76055 NA non-coding downstream 45753 25542399 ~ 25596454 (+)
G76083 rps19,LOC106942871,LOC103477840,LOC102304814,LOC102192408 non-coding downstream 109504 25606150 ~ 25617478 (+)
G76089 NA non-coding downstream 127784 25624430 ~ 25701085 (+)
G76109 NA non-coding downstream 305866 25802512 ~ 25804190 (+)
G76113 LOC101165095,LOC108235336 non-coding downstream 324967 25821613 ~ 25822239 (+)
apoc1 NA other upstream 2456 25491784 ~ 25493262 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other upstream 114920 25374207 ~ 25380798 (+)
LOC120561858 NA other upstream 499409 24915254 ~ 24996309 (+)
grik5 grik5 other upstream 610345 24806289 ~ 24885373 (+)
dedd1 dedd2 other upstream 961442 24520735 ~ 24534276 (+)
apoc2 NA other downstream 5954 25502600 ~ 25504052 (+)
taf12 taf12 other downstream 296172 25792818 ~ 25795519 (+)
G76192 NA other downstream 643255 26139901 ~ 26142627 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other downstream 1148738 26645384 ~ 26647615 (+)
G76315 NA other downstream 1311472 26808118 ~ 26815391 (+)

Expression


Co-expression Network