si:ch211-269k10.4


Basic Information

Item Value
gene id si:ch211-269k10.4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 20088865 ~ 20093308 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806419.1
GAAGTGAACATCATGCCTGAAGACTGAGGCACATCTTTGAGGCAGAGTGTGAAATAGATACATCTCAAGCCAAGCCTGTTGGAGAAGCACCATGGCCTGTGCCGACATTGACATGGACATCAATGAAGCTGATGTGGCGCCACGCAGAGCCGGGCTGAGAGAGTCGCCATTAGTGCGACATTACCAGGCTACAGAGCTCGTGCCAGACAACAAAGGGCCGCTGCATGACCTGCTGCAGAAACAACCTGCTGTGTTGGGGTCTCTGCAGATAGTGAGCGGTCTCCTCAGTGTTGGAGTGGGAATTCTTTTTGCAGTAACTCAGGAGATGAAACAGTCCCTTTTCACTCTGTTCAGAGTTTCCCAGCTGACTGGAGCACTCTTCATCATTGCTGGAATTGTTTCCAACCTGTTGTTCAAATATCCAGTATTACTACCTGTGTCCCTCATGGTTAACTGTGGCTGTATTATTGTAGCTGTAGTTTCAGCGTGTCTGATAAGTGTTGACCTGGCTCACTGGAGTACAGAAAATGATCAGCATTTGAGGATGGAGTTGCTGGAACTTCTTGTATTGGGGCTCGAGGTTTTTCTCTCTACAATCCTCTGCTTCTGGTTCGCTAAAGAGAAACGTGCCAAATCCCCATGATCAAGCTGATGAAATCATTTGAGAagaactaaattaaaaataactttCTATATAGGAGGGCCAGGGGGCTGTATATTAGTGCTTAAAAGAAGTTAGGCGACTGTATTagtggaccttttttttttttttttgtatatcaaGTGTGGCTTTCTGTTCTGTCTCGATTGACTATCGGAGCTGAAACCCCTGCTCAACAGCCCCGGGCCGTGGTCCGCGTCTGATGTTTGACTCGGACTGATAACACAAGAATTGTGGTAAATAAATGTCAGCTTCCCTCATGTGACAGAAAAACCACTATACGTCTCTGTGTTTAACGGTAGTAGTGGCCTCATAGTGCTGCTCTGTCAGTCTATCTGCAAGGGTCTCTGGGTGTGTGGTTTGACACTTGTGCTTTGGTATCAGTGGAAATATCTGCAGCGCTTTCAGCTGCACTCACACTTCCAGCTGGTTTCACATACAGAAAGCTTTACTGAGCTATGAAGGATTTGTATGAGAAAATACTTAATTTCATTTCAAACTTTACTGTGGCGAAGAAACGAATACAACaacatgttttaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806419.1 True 1203 mRNA 0.45 6 20088865 20093308

Neighbor

gene id symbol gene type direction distance location
gsdmeb NA coding upstream 100118 19978757 ~ 19988747 (+)
osbpl3b osbpl3,LOC102198167 coding upstream 111871 19947456 ~ 19976994 (+)
LOC120561951 NA coding upstream 143690 19942987 ~ 19945175 (+)
skap2 NA coding upstream 196886 19881877 ~ 19891979 (+)
hoxa2b LOC100534423,LOC102306217,LOC102196176,LOC102792302 coding upstream 210197 19876877 ~ 19878668 (+)
brd9 brd9 coding downstream 77308 20170616 ~ 20178125 (+)
zdhhc11 NA coding downstream 85276 20178584 ~ 20184495 (+)
nbeal2 nbeal2 coding downstream 148296 20241604 ~ 20275511 (+)
nradd LOC104940332,LOC103360043 coding downstream 185185 20278493 ~ 20287448 (+)
rbm12bb LOC104957629 coding downstream 220967 20314275 ~ 20321879 (+)
G73871 NA non-coding upstream 36859 20019109 ~ 20052006 (+)
G73881 NA non-coding upstream 42485 20040871 ~ 20046380 (+)
G73836 NA non-coding upstream 268274 19820235 ~ 19820591 (+)
G73776 hdac9 non-coding upstream 449406 19634873 ~ 19639459 (+)
LOC120562701 NA non-coding upstream 463254 19614503 ~ 19625611 (+)
G74067 NA non-coding downstream 221176 20314484 ~ 20318117 (+)
G74081 NA non-coding downstream 247033 20340341 ~ 20340927 (+)
G74091 NA non-coding downstream 309515 20402823 ~ 20423897 (+)
G74116 NA non-coding downstream 382856 20476164 ~ 20476367 (+)
G74119 NA non-coding downstream 391402 20484710 ~ 20484943 (+)
G73779 hdac9 other upstream 439354 19646975 ~ 19649511 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other upstream 635582 19447167 ~ 19453283 (+)
hcst LOC104925504,LOC104961397 other upstream 896763 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 929870 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 1226907 18833245 ~ 18861958 (+)
LOC120561838 tppp other downstream 99382 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 121280 20214588 ~ 20226991 (+)
gra NA other downstream 229022 20322330 ~ 20325961 (+)
glipr2l glipr2 other downstream 507015 20600323 ~ 20605165 (+)
sec61b sec61b,LOC102796100 other downstream 914705 21008013 ~ 21011414 (+)

Expression


Co-expression Network