LOC120562640


Basic Information

Item Value
gene id LOC120562640
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31917746 ~ 31932047 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806455.1
CATCAGCCTTTGAGAAAACCATTCCTGCACAGAACAGGAGTTTCCTGGCAACAGGTGTGAGACTTCAAAGGTGGCAGACAATGGAGGTGGCTGATgacataAAGAAGTCCCTTCAGAAGTCTGGAATACGGAGAGATGTTGATGTTTGCCAACTCAGCCTCGCCACAAAAAAGCTCACCGGCGTCCCTGACTTATCAAGATTTCACTTTCTGAGGAAGCTGTGGCTGAATAACAACAGGATCAGAGAGCTCAGCTGCCGTTCCCTCAACTGCTGCTTGACTGAACTTTAcctccacaacaacaacatcaagtCTATATCTGGGGCCCTAAATCACCTGACCTGCCTCCGACTTCTTTTTCTCCACAACAACCAGATCAGAGGGCTGGAGGACACGATGCACGAGCTCAGGAGGATGCAGCAGCTCCAAACTGCATCTTTTTTCCTCAATCCCATCTCCCATGACCCTGCGTATCGCCTCCATGTGATCCACCGCCTGCCTTCTATCCTGGTTTTGGATAGAAAAGAGGTGAGGTCAGTGGAGAGGGAGAGATCCTTCCAGATGTACAGCCAGGAGCGTCATCGCGTCCTCCAGTCTGTGGCTTTCTGCAGACGGGCAACATAGTCCACAAGCTGAGAGGAAGTTTGTTTCCGGTCATTACACTGTGCAAAGATGTGTTTTCAAGTGTATTAATAACTCTGTGGTTTGcttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806455.1 True 712 mRNA 0.49 8 31917746 31932047

Neighbor

gene id symbol gene type direction distance location
arl4aa arl4a,LOC103374731,LOC104928894 coding upstream 413084 31500830 ~ 31504662 (+)
si:dkey-30e9.6 NA coding upstream 419260 31497043 ~ 31498486 (+)
vwde wif1 coding upstream 468295 31444788 ~ 31449451 (+)
tmem106ba tmem106b,LOC103368608 coding upstream 482689 31426759 ~ 31435057 (+)
LOC120561996 LOC102798925,LOC101475373 coding upstream 716486 31176789 ~ 31201260 (+)
pkdc LOC102076377,LOC101468599,LOC102793757,LOC102209191,LOC102303972 coding downstream 11364 31943411 ~ 31947773 (+)
herpud2 LOC103361314 coding downstream 17575 31949622 ~ 31959398 (+)
dpy19l1l dpy19l1,LOC102792675 coding downstream 158111 32090158 ~ 32124377 (+)
LOC120562212 NA coding downstream 213345 32145392 ~ 32149331 (+)
smarcc1a smarcc1 coding downstream 234272 32166319 ~ 32193048 (+)
G77593 NA non-coding upstream 294580 31622827 ~ 31623166 (+)
G77592 NA non-coding upstream 303431 31612481 ~ 31614315 (+)
G77591 NA non-coding upstream 306435 31611058 ~ 31611311 (+)
G77558 NA non-coding upstream 392163 31525183 ~ 31525583 (+)
G77554 NA non-coding upstream 399128 31517763 ~ 31518618 (+)
G77666 NA non-coding downstream 1038 31933085 ~ 31935062 (+)
G77669 NA non-coding downstream 9988 31942035 ~ 31942794 (+)
G77683 NA non-coding downstream 48004 31980051 ~ 31982392 (+)
G77684 NA non-coding downstream 50421 31982468 ~ 31982716 (+)
G77685 NA non-coding downstream 53419 31985466 ~ 31985740 (+)
G77447 NA other upstream 781600 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 1186137 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 1557158 30351495 ~ 30360588 (+)
G77239 NA other upstream 1793108 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 1808201 30073937 ~ 30109545 (+)
G77682 tbx20 other downstream 44271 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 473086 32405133 ~ 32421472 (+)
G77888 NA other downstream 1168366 33100413 ~ 33101534 (+)
bmper bmper other downstream 1894040 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 1962313 33894360 ~ 33904285 (+)

Expression


Co-expression Network