LOC120562644


Basic Information

Item Value
gene id LOC120562644
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33916999 ~ 33919175 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806468.1
TGTGGATTTTACTCTTTAATATATTTGTACGTATTAAACAAACGATATAAAGATATACCATGAAAGGACAACCAATCATTACTGATCCTATGTTCCTGCTGCACTCCCCAGCAGAGTTTTATTTGCCAACTTTGGACCGAGTTAAACATTGTCTTCCAAAGGGAATCTGGTTTCTTTTAACATTCACATACAAACAAGGCTCCGTTGTAAACCACGGAGTAAACAAGGACTTGAAACCGCTCCTCTTACTGGAATGTAGCAAAACCTGACCAGCACTCCCTCTTCCCTCCTCAGAGAGTCTTTTTAATATCCACGTTTATTGGGAAGTGAAATGGCGCTGCAGCTAGACAAGGAGAAACTCtgctgttctgtctgtctggatctactgaaggatccggtgactatTCCCTGCGGGCACAGCTGCTGCATGAGCTGTGTTAAAAGCCGCTGGGATGAAGAGGATCCGAAGAAAATCTACAGCTGCCCTCAGTGCAAACAGACcttcacaccgaggcctgtccTGGTGATAAGTTCCCTGTTGGCTGATTTAGTGAAAGTGGCGAAGAAGACGAGACTTCACGTTGCTCCAGCTGATCACTACTATGCCGCTCCTGGAGACGTCCCTTGTGATTTCTGCGCCGGGAGAAAGCTGAAAGCACACAAGTCCTGCCTGATGTGTCGAGTCTCTTACTGTGAGCTCCACCTTCAGCCTCACTATGAATCCCCTGCCTTTGAAAAACACAAGCTGGTTGGACCCTCCAAATATCTCCAGGAGAAGTATTGCTCTCGCCACGACGAGGTGATGAAGATTTTCTGCCGCAACGATCAGCAGACCATATGCGTTTTGTGCTCCATGGATGAACACAAAGACCACgacacagtctcagctgcagTGGAAAGGAATGAGAAGAGGAGGGAGCTCGGGGTGAGTCGGCACAAAATCCAGCAcagaatccaggacagagagaaagatgtcaAAGTGCTTCAGCAAGAGATGGAGGCTATCAATCGCTCCGCTGATGAAGCAGTGAGGGCCAGCGAGAAGATTTTCACCGAGCTCGTCGGTCTCGTCGAGAAAAGAAGCTCCGCGGTGACGGAAGAAATCCGATCCCAGCAGAAAACCGAAGTTAGCCGGGCcaaagagcttcaggagaagctggaggaGGAGATCGCTGAGCTGAGGAAGAAGGACGCCGAGCTGGAGCAACTCACACACACCGACAACCACATCCAATTTCTACATAATTACCTTTCGCTGTCACATCTAAGTGAATCTACAGACTCCCCCAGATTACATATTCACCCTCTGCAATACTTTGAAGATGTGATAGCGGCTGTGTCAGAGGCCCGAGATGAACTACAAGACATTCTCTTCGGGAAATGTCTGAAGATCTCGCAAAAAGTGAGTGAGGTAGATGTTTTACTGCCACAACCAGAGCCCGAGACCAGAGATGAGTTCCTACAATATTACCGTCAAATCACACTGGATGCCAACACAGTTAACGCAGGGCTGTCGCTATCTGAAGAGAACCGAAAAGCAACAGTAATGAGAGAAAAGGAATTGTATTGCAGCCACGCAGACAGATTCACTGACTGGCTTCAGGTCCTCGGTAGcgagagtctgactggacgttgttactgggaggtggagaggagcaGTGGAGGCATTTCAGTAGCCGTTGCATACAAGGATATAAGCAGAACAGGGAGTGAAAGCGGATTTGGTAACAATGACAAGTCTTGGGCATTAGGATGTTTCGACATCGGTTATAATTTCAGACATAATAATATCAGAAGTTCACTCTCAGGCCCACAATCCTCCAGAGttggagtgtacctggatcacaagGCAGGgactctgtccttctacagcgtctctgaaaccatgactctccttCACAAAGTCCAGACCACGTTCACTCAGCCGCTCTATGCTGGATTTTGGGTTTATTGGGTCGGAGACACTGCTGAGTTGTGTGAGCTGAAGTAGAatggagctaaaaaaaaaataggtgatattcttattctttttgtttttaaataagttTGCCTCATGTTGCACTGTGTTCTTTGTGTCAATCTAACAAGATGGGCAGGTTGACTGTGATGTCTTCTTCCTTGAGTTTGTTTTTTAGCACAAACTGTAAAATTGTGCATCACTTTATGTGCTGCAGAga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806468.1 True 2177 mRNA 0.47 1 33916999 33919175

Neighbor

gene id symbol gene type direction distance location
mettl6 mettl6 coding upstream 5785 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 94170 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 285286 33631642 ~ 33631713 (+)
trnap-agg_4 NA coding upstream 285889 33631039 ~ 33631110 (+)
nt5c3a nt5c3a coding upstream 288054 33605846 ~ 33628945 (+)
LOC120562646 NA coding downstream 3403 33922578 ~ 33935943 (+)
LOC120562692 NA coding downstream 164920 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 500732 34419907 ~ 34441093 (+)
nes NA coding downstream 690735 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 1032877 34952052 ~ 34964798 (+)
G78000 NA non-coding upstream 328743 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 328907 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 398484 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 423339 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 456764 33460022 ~ 33460235 (+)
G78052 NA non-coding downstream 3818 33922993 ~ 33923230 (+)
G78054 NA non-coding downstream 19084 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 31598 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 43619 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 65674 33984849 ~ 33987987 (+)
LOC120562157 NA other upstream 12714 33894360 ~ 33904285 (+)
bmper bmper other upstream 37867 33826087 ~ 33879132 (+)
G77888 NA other upstream 815465 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1495527 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1937090 31976318 ~ 31979909 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 71367 33990542 ~ 34042648 (+)
G78200 NA other downstream 610180 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 919982 34839157 ~ 34856532 (+)
G78594 NA other downstream 1486200 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1824120 35743295 ~ 35773988 (+)

Expression


Co-expression Network