mettl6 (mettl6)


Basic Information

Item Value
gene id mettl6
gene name mettl6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33906390 ~ 33911214 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806469.1
TGAATGCTACACGGAGGATTTTAAGTAACGCACAAGATGGACGTCAAATGTAGAAAAATCCAACATCGCgcaagacatttttttaaactacgttgattttaatttttttgaaatAACAGAAGTTGTACACCTTGTTGCATCGGTTGTTTTCCTATAACTTAACGATAAGTAACGGTACTGACAAGAGGAGGCGGCTAATCCCGAGACTTCTTATAACACTATGGCACTGTCAACAAATGAAAGTCTCCCTGGTGATATTAAAACATCACCTCCTGAAGAAAACGTGGCGTTAAAAGACGACATATGTCCATGTGTCCCCGGGCGGACCAAAACCTCCACCGGCAGAGTTTTAACCGCGGAGGAGGCGGACAGACTCGGCGGTGAGCGGGCTCTTGTGTCCGACTTCAAACTGATGAAGTTGGAGAAAGAGGCGCAGAAAAACTGGGACTTGTTTTACAAAAGAAACACGACGAACTTCTTCAAGGACAGACACTGGACCACCAGAGAATTTGAAGAGCTCAAGGCTTGCAGAGAGTTTGAGTcccagaggctggtgctgctggAGGCTGGCTGCGGTGTAGGAAACTGCATCTTCCCTCTGCTGGAGGATGACctcaacatttttgtttatgcCTGTGACTTCTCACCACGAGCTGTTGAATTTGTCAAACAAAATCCTCTGTACTGCCCCGAGCGCTGCTGTGCCTTCCAGTGTGACTTAACTAAAGATGATATGAGGGAAAATGTGCCCGAGGGCAGCGTGGACGTCGTCACTCTCATCTTCGTCCTGTCGGCCATCCACCCTGACAAGATGAAGCTGGCTTTGCAGAACATTAGCAGGGTGCTGAAGCCCGGTGGCATCGTCCTGTTCAGGGACTACGGCCTGCACGACCACGCCATGCTCCGATTTAAAGCCGGCAGCAAGCTGGGCGAGAACTTCTACGTCCGCCAAGACGGAACCAGGTCCTACTTCTTCTCTAAAGAGTTCCTTGCCGAGCTGTTTGCGGACACGGGCCTCCAACCTGTTTCTAACGACTACGTCCTGAGAGAGACGGTCAACAAAAAGGAAGGGCTTTGTGTTCCCAGAGTGTTCCTGCAGAGCAAGTTTACCAAGCCCAGCCAATCGCAGAGCTCCTGATGTCACTTGGTCTATATCTATTACCTCATAAATCATGTGGAACACTGACATGTCCAGTTGAAATTGGatagcaaaagaaaaatgtatattCCTTGGGGGAATCGGTAGCCCTAACGTCACCTGGTTCCCTACACGTTGCTGTTTTTGAATCCTTAAGACCATGAGGGAGATGCTGGTGGTTAAGAGACATTAATACTGCCTGGTCGCACTAATCGACTGATGCATTTTGGCTCCTTCGCCAACAGATAAAGACAGTGTTGCACTGGGACTCTTACAGGTGGAAATATGGGGAACTATGTGGAACATGGAAACGCAAAATGCTACGAGGAGCATGACTATTCTGCAAGGACCAAAGCTGGATAAATAGGGAATCTCAGTGAATGGTATTTGCGGTTTCACATCAGTTTAATTTACAATTCATGGCCTTCAACTAACTTTGATCAGCCTTTAGCATAACCAGGAGAAGTTCTCTGTAAGCCTTCAAATGTTGTTCTACTCTGAACAAACCGGTATTTCGATTGCCTCCAGTATAATTTTCTCCACCCCATATCCCTCCCCACCCCCGATGTTAAGTTAATGGAATAACTTTGAATGAGGTGAgtcctttttcattttgtttgatttcattttaaaacttttGAAAAAGTGTTCAACTGCATTGTGTCATGCCACACTTTGTCTAAAATATGCTCATAGTGTTACATCGTGACTATGGtccattaaagaaaaaaaagaaaagtcagctGTAAACCACAGAGGCAGATAATAGTCATAcatatatatcaatattgtgactttttctaaataaatgtattaaaacTTTA

Function

symbol description
mettl6 Predicted to enable methyltransferase activity. Predicted to act upstream of or within methylation. Orthologous to human METTL6 (methyltransferase 6, methylcytidine).

NR:

description
PREDICTED: methyltransferase-like protein 6

GO: NA

KEGG:

id description
K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806469.1 True 1962 mRNA 0.45 5 33906390 33911214

Neighbor

gene id symbol gene type direction distance location
bbs9 bbs9,LOC102784155 coding upstream 83561 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 274677 33631642 ~ 33631713 (+)
trnap-agg_4 NA coding upstream 275280 33631039 ~ 33631110 (+)
nt5c3a nt5c3a coding upstream 277445 33605846 ~ 33628945 (+)
trnap-agg_3 NA coding upstream 280388 33625931 ~ 33626002 (+)
LOC120562644 NA coding downstream 5785 33916999 ~ 33919175 (+)
LOC120562646 NA coding downstream 11364 33922578 ~ 33935943 (+)
LOC120562692 NA coding downstream 172881 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 508693 34419907 ~ 34441093 (+)
nes NA coding downstream 698696 34609910 ~ 34622583 (+)
G78000 NA non-coding upstream 318134 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 318298 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 387875 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 412730 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 446155 33460022 ~ 33460235 (+)
G78052 NA non-coding downstream 11779 33922993 ~ 33923230 (+)
G78054 NA non-coding downstream 27045 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 39559 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 51580 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 73635 33984849 ~ 33987987 (+)
LOC120562157 NA other upstream 2105 33894360 ~ 33904285 (+)
bmper bmper other upstream 27258 33826087 ~ 33879132 (+)
G77888 NA other upstream 804856 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1484918 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1926481 31976318 ~ 31979909 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 79328 33990542 ~ 34042648 (+)
G78200 NA other downstream 618141 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 927943 34839157 ~ 34856532 (+)
G78594 NA other downstream 1494161 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1832081 35743295 ~ 35773988 (+)

Expression


Co-expression Network