LOC120562646


Basic Information

Item Value
gene id LOC120562646
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33922578 ~ 33935943 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806470.1
GGTGACACAACTGTCATTGTGAAATTAGTTGCCATAGATGGCCACTGATGGATCAATCTACAGGGTGTGTGTAATCAGATTGATTAATCAGTGCCCATCTATGGAAAGGCAGATGGTGGTTATAAGTAAGTAGATTTTGTAGCCATCTCTAACAGATGGTTCAACTGTCAAAAGAATAGACATGGCAGACTACATCAATTCACAAGTAACTGGAGAGAGGAGTATTTtggagaagagagaaaatgtCCATTCAGGAGGGTCAAAAGTCTACAGGGTTGTCGGTGTCAGCTTCGGTCTGCTCTGCATCATTCAGTCTGCTCTCAATATTTCTCTTTGGCTCCATCGAATTGGATGTAACGACCAGATCGGAGATTTTGAGATGTTGAAGGACCAGCTCGTCCAACAACAAGATCAGATAATGAAGCTTCAAACTGAAAGAGAGAGCCTGAAAATGAGGCTTTGTGAAATGGCAGAACAAAAACCCCAAGGCTGTCCGCAGGGATGGAGGCTATACATGTCCAGCTGTTACTATGTTTCTACTGTGACAAAGACCTGGCAGAATGCCCAGTTCGACTGTGAGGCGAGAGGAGCTCACCTCGTGGTTTTAAATGATACAAAGGAAGAGGATGCTGTCCGTGGTTTTGGAAGTCAAGTCGCGTGGATCGGCTTGAGGGCTCAACGAAATGTTCGGTTGGATTCGTGGACGTGGGTGGACGGAAGCAAAGTGACTAATACTGACAGGATTCGGCAGCCAGTTGATCAGCGTTTGAACTGCACCTATACCGGCACTATGAAGTGGGTCCTTTCCGACTGCAATGAACAACACTACTGGGATGGTCAAAAGTCTACATGGCTGTCGGAGTCAGTGTGGGCCTGCTGTGCATCATGCAGTTcactctcaatgttttatttcgaCTTCAAGCCGTTGGGTGTTCTGTCGGGTCCTACAACGTCTCCACTGGCAACGCCACCATGATGTCAGATAGTGACATCAGAGTCCTGATTTTAGAGAGAGACCAACTGGTTCGAGAGAGAGACCAACTGGTTCGAGAGAGAGACCAACTGCTTCGAAAGACAGACCAACTGGATCGAGAGAAAGACAAACTGGTTCGAGAGAGAGATCAATGTGATCAAGAGAGACAACGATGTGTTCCAAAGGCGGACTTtggct
>XM_039806471.1
CACAACTGTCATTGTGAAATTAGTTGCCATAGATGGCCACTGATGGATCAATCTACAGGGTGTGTGTAATCAGATTGATTAATCAGTGCCCATCTATGGAAAGGCAGATGGTGGTTATAAGTAAGTAGATTTTGTAGCCATCTCTAACAGATGGTTCAACTGTCAAAAGAATAGACATGGCAGACTACATCAATTCACAAGTAACTGGAGAGAGGAGTATTTtggagaagagagaaaatgtCCATTCAGGAGGGTCAAAAGTCTACAGGGTTGTCGGTGTCAGCTTCGGTCTGCTCTGCATCATTCAGTCTGCTCTCAATATTTCTCTTTGGCTCCATCGAATTGGATGTAACGACCAGATCGGAGATTTTGAGATGTTGAAGGACCAGCTCGTCCAACAACAAGATCAGATAATGAAGCTTCAAACTGAAAGAGAGAGCCTGAAAATGAGGCTTTGTGAAATGGAACAAAAACCCCAAGGCTGTCCGCAGGGATGGAGGCTATACATGTCCAGCTGTTACTATGTTTCTACTGTGACAAAGACCTGGCAGAATGCCCAGTTCGACTGTGAGGCGAGAGGAGCTCACCTCGTGGTTTTAAATGATACAAAGGAAGAGGATGCTGTCCGTGGTTTTGGAAGTCAAGTCGCGTGGATCGGCTTGAGGGCTCAACGAAATGTTCGGTTGGATTCGTGGACGTGGGTGGACGGAAGCAAAGTGACTAATACTGACAGGATTCGGCAGCCAGTTGATCAGCGTTTGAACTGCACCTATACCGGCACTATGAAGTGGGTCCTTTCCGACTGCAATGAACAACACTACTGGGATGGTCAAAAGTCTACATGGCTGTCGGAGTCAGTGTGGGCCTGCTGTGCATCATGCAGTTcactctcaatgttttatttcgaCTTCAAGCCGTTGGGTGTTCTGTCGGGTCCTACAACGTCTCCACTGGCAACGCCACCATGATGTCAGATAGTGACATCAGAGTCCTGATTTTAGAGAGAGACCAACTGGTTCGAGAGAGAGACCAACTGGTTCGAGAGAGAGACCAACTGCTTCGAAAGACAGACCAACTGGATCGAGAGAAAGACAAACTGGTTCGAGAGAGAGATCAATGTGATCAAGAGAGACAACGATGTGTTCCAAAGGCGGACTTtggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806470.1 True 1171 mRNA 0.47 8 33922578 33935943
XM_039806471.1 False 1163 mRNA 0.47 8 33922583 33935943

Neighbor

gene id symbol gene type direction distance location
LOC120562644 NA coding upstream 3403 33916999 ~ 33919175 (+)
mettl6 mettl6 coding upstream 11364 33906390 ~ 33911214 (+)
bbs9 bbs9,LOC102784155 coding upstream 99749 33632641 ~ 33822829 (+)
trnap-agg_5 NA coding upstream 290865 33631642 ~ 33631713 (+)
trnap-agg_4 NA coding upstream 291468 33631039 ~ 33631110 (+)
LOC120562692 NA coding downstream 148152 34084095 ~ 34088746 (+)
LOC120561733 NA coding downstream 483964 34419907 ~ 34441093 (+)
nes NA coding downstream 673967 34609910 ~ 34622583 (+)
hapln2 hapln2,LOC102779935 coding downstream 1016109 34952052 ~ 34964798 (+)
rrnad1 rrnad1 coding downstream 1107278 35043221 ~ 35058363 (+)
G78000 NA non-coding upstream 334322 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 334486 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 404063 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 428918 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 462343 33460022 ~ 33460235 (+)
G78054 NA non-coding downstream 2316 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 14830 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 26851 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 48906 33984849 ~ 33987987 (+)
G78134 NA non-coding downstream 112497 34048440 ~ 34053736 (+)
LOC120562157 NA other upstream 18293 33894360 ~ 33904285 (+)
bmper bmper other upstream 43446 33826087 ~ 33879132 (+)
G77888 NA other upstream 821044 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1501106 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1942669 31976318 ~ 31979909 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 54599 33990542 ~ 34042648 (+)
G78200 NA other downstream 593412 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 903214 34839157 ~ 34856532 (+)
G78594 NA other downstream 1469432 35405375 ~ 35408682 (+)
LOC120562275 NA other downstream 1807352 35743295 ~ 35773988 (+)

Expression


Co-expression Network