LOC120562651 (tyrobp)


Basic Information

Item Value
gene id LOC120562651
gene name tyrobp
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19193475 ~ 19194806 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806478.1
ATTTCAGCAGAAACAGAAATGAACCTGACCTTATACGGCTCCTTATCTTGGCATTCACTTGGACGCGTTAATTTACAGAATGAATTGTACTCTTACAAAGCCAAAAAGAAGGCCTGAATCCTCATGACCAAATGTGACAGACCAGAagaatttctgtttatatgAGACCTGTAACCCTCACATGAATGTGACATTACAGAGAAGAAACAGACACACCAGCTTCCTCTTCTCTCAGTGGActtcctcctcgtcctcctcctcacaGTCACATACTGACAACCCTCACACCACTGCCAGTATCGTCTGTGGACAGCTCTTCATCTGTGAAGTGTGAACCCTCCTACATCGCTTTCAACATCTTGTTTATGGGTGCGACGACAAAGCCATTTGAAAGAGAACAGAAGGACCAGTGGCCCTCAACCTCTCTCTTATTTCCTCCTTTGCCAAAAACCAACACAAAGAAGATGTCTGACGCTCTTTGTATTGTGGGTTCATTGTTTGGGTCGGCAGAAGGACCGCAAGACTGTGGTTTTTGCTACCTGATAAATATGGCGTCTGTCATGGGCATTATTGCCTCTGATATCCTCCTGACCATCTTCATCACTATTTCTGTGTTCTGCTTTGCAAGTCACCACAAGAGAAGGAGGGAATGGGATTCTCGTGATGGTAAAAGAAATCTGCCATCTTCAGTATCAAAGAAAATGGCAACAGAGGTCACAGAATCTCCCTATCAGGAGTTACATGGAGTCCAATCAGATGTGTACAGTGAGCTTCGGCACTTTAGGAAGTGAAAGAATGGAACTTCAAAAAAATCCAACAAGTCTGAAAGCTATAACTGGTCAACACCACACACTCTTCTACACACTTCTTGTTTTGCCACTTATACTGCTGAAGCATTATAGGTAATAAAATACgttataaacata

Function

symbol description
tyrobp Predicted to enable signaling receptor binding activity. Acts upstream of or within phosphatidylinositol 3-kinase signaling. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface. Is expressed in liver; lymphocyte; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in Nasu-Hakola disease. Orthologous to human TYROBP (transmembrane immune signaling adaptor TYROBP).

NR:

description
PREDICTED: TYRO protein tyrosine kinase-binding protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806478.1 True 926 mRNA 0.43 5 19193475 19194806

Neighbor

gene id symbol gene type direction distance location
LOC120562624 fcgbp coding upstream 45682 19129524 ~ 19147793 (+)
LOC120561940 NA coding upstream 72774 19116593 ~ 19120701 (+)
fxyd5 NA coding upstream 92401 19095468 ~ 19101074 (+)
nphs1 nphs1 coding upstream 103516 19021154 ~ 19089959 (+)
zmp:0000001114 NA coding upstream 237438 18934230 ~ 18956037 (+)
LOC120562955 LOC102233830,LOC107102542,LOC103371668,LOC108241910,LOC101156432,LOC107378666,LOC101063201,LOC103388495,LOC102205547 coding downstream 3714 19198520 ~ 19204699 (+)
LOC120562665 NA coding downstream 10792 19205598 ~ 19211398 (+)
LOC120562666 LOC102206297,LOC106517725,LOC104965579 coding downstream 16689 19211495 ~ 19220952 (+)
LOC120562959 NA coding downstream 50552 19245358 ~ 19269769 (+)
LOC120563155 NA coding downstream 83509 19278315 ~ 19280622 (+)
LOC120562631 fxyd7,LOC103388498 non-coding upstream 30671 19159464 ~ 19162804 (+)
LOC120562629 NA non-coding upstream 34457 19158475 ~ 19159018 (+)
LOC120562630 NA non-coding upstream 35106 19148521 ~ 19158369 (+)
G73568 NA non-coding upstream 67627 19125156 ~ 19125848 (+)
G73501 aplp1 non-coding upstream 261302 18911394 ~ 18932173 (+)
G73586 csnk2b,LOC102207154,LOC106573472,LOC101175345,LOC104925497,LOC102778826 non-coding downstream 77921 19272727 ~ 19276516 (+)
G73606 NA non-coding downstream 124632 19319438 ~ 19320048 (+)
LOC120562732 NA non-coding downstream 258963 19453769 ~ 19456616 (+)
LOC120562701 NA non-coding downstream 419697 19614503 ~ 19625611 (+)
G73776 hdac9 non-coding downstream 440067 19634873 ~ 19639459 (+)
hcst LOC104925504,LOC104961397 other upstream 1373 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 34480 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 331517 18833245 ~ 18861958 (+)
proser3 NA other upstream 364787 18819201 ~ 18828688 (+)
LOC120562824 NA other upstream 446800 18744662 ~ 18746675 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 252361 19447167 ~ 19453283 (+)
G73779 hdac9 other downstream 452169 19646975 ~ 19649511 (+)
LOC120561838 tppp other downstream 997884 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 1019782 20214588 ~ 20226991 (+)
gra NA other downstream 1127524 20322330 ~ 20325961 (+)

Expression


Co-expression Network