c7h1orf43 (LOC104934460,LOC104959162,LOC103388199)


Basic Information

Item Value
gene id c7h1orf43
gene name LOC104934460,LOC104959162,LOC103388199
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21764475 ~ 21767853 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806487.1
TGACCACCCCGGAAATCAACAAACCGGGCGGTTAGCGAAATGTAACAACGGAGAGTACTTTACCTTCTTTTACTTCCCTGTTGTAGGTCTTTcgtttaacgttagcttcatGTGTTTTAAAAACGAGCAATTAAATGAAACAGTATGCCTTTCAAATGCCAAGTGTTGGACGTACTTTCCGTCATTTAGCTTTGTTTAGCTAACGTTTGGTTAAGTTTAACCATTTCAAAATGCGGAGTGATTCTCTTCTCTCGAGCGTTAACGTGGTGCTTGTAATGGCCTTCGGTAGTCTGGTGTTTGTTTTGCTGTTTATCTTCGTCAAAAGACAAATTATGCGATTTGCCATGAAGTCTCGGAGAGGACCACATGTTCCCCTTGGCCACAATGCTCCTAAGgaGCTGAGACAAGAAATTGAAGCCAAACTGTGCCAGGTCCAGAAAATCCACTTTGAGCCTCGTCTGCTCTCCCCAGATGATGACCGGCTAAAACACAAAGAACAGTCTGGTTCACATGACTACCTGTACAGGATGAGAGCACTGGATGCCATCAGAGACACTGATCTTCCTTTCCGTGAACTGGGTGGCACATCCACCGCTGTGACGGGTAAAAGACTTCGGACCTGGCTTCTACATCTACGAAACTCCCACTGTGTGTTCCGAGACAGTCTGAGCTCGATCATCGACAAAGTGCTGGATGGGTACAACAAAGCACGTCACGGGGCTGagGCTTTTGGGGAAGCAGAATTTTTGAAATACCAGGAAGCTCTAACTGAACTGGCATCTGTCGTCAAgtcccacagcagcagcagcagcagcactccgAGCCAGTACCACCAGTCTGCAGCCAAAGACCTGACCAGCACCACGGAGCTTGcaagctcctcctcctcccccacccAAACCACCTACCTCACATCTTCAATGCAGCAGCGTAGCAAGCGGCCCGGACACTTCCTGGAGTTGAAGAACTTCAAAGACAACTACAACACTCTGGACAGCTCCTTCTGAAAACTTGTGATGCCCATCCAAAAGAAAGTTCAAAGACAAGTAGTGCTGCCAGTAATTAAAGTGCCTATGGACAACGGGTCACTGTCGCCAGATAGTTACGAGTGAAATGAAAAACTGCCTTCATGTATTAACACATATTGCCTGGTTTACAGTATAATGCATATCAGACTCAGTGCTCTTTACCTAAGTGTAGCTTATGCATATATCCTGTATAAATGCATGTTTGAGTGCTATAATTAGGTAGAAAAGTGACTATAATAAGTAGGGTTGATTTGACCAAAACAAAACCAGAGTCACATGGCTATGCAATGACATAAGACAATCATATTTATTGCAGTGTAAAGTCCTATGCAAACTTGTTAGAATTAACAGACTGTATTTAAACACGCTAATAGTTAAAGTTTGTAGAGAAAACAAGTATTAATGGTGGAAAAACACACTGGTTATGTCACTTAtgtttacatgtatgtatgtctttttttaagcCTTAAATGTTTGTCTTACAGAAGCCATACTTGATTTAATGAATTTTGATGATTAAGTGCTTTTTTGATTTAATCGTTCTCTCAGTGCAATGTAACAGTAACAGTATTCCAGTGCATTAATGCATTCTGAATGTTGCATCAGGGGAAGTCTCTTTCTGGACTTTAGTAGTCAGGGTTCCCAGTGAAGCATGTGATGTCCATGCttgaatcattttattttctttggtgCTTATTGTACAAGTATCCATCCAAATAAAACTGTGACGTACTGTCAAAATGTT
>XM_039806488.1
acacacacacacgcacgcacgcacacacgcagcaCAAGTCTAAATTGGCTACAACAGTGTTTGTTTTGCTGTTTATCTTCGTCAAAAGACAAATTATGCGATTTGCCATGAAGTCTCGGAGAGGACCACATGTTCCCCTTGGCCACAATGCTCCTAAGgaGCTGAGACAAGAAATTGAAGCCAAACTGTGCCAGGTCCAGAAAATCCACTTTGAGCCTCGTCTGCTCTCCCCAGATGATGACCGGCTAAAACACAAAGAACAGTCTGGTTCACATGACTACCTGTACAGGATGAGAGCACTGGATGCCATCAGAGACACTGATCTTCCTTTCCGTGAACTGGGTGGCACATCCACCGCTGTGACGGGTAAAAGACTTCGGACCTGGCTTCTACATCTACGAAACTCCCACTGTGTGTTCCGAGACAGTCTGAGCTCGATCATCGACAAAGTGCTGGATGGGTACAACAAAGCACGTCACGGGGCTGagGCTTTTGGGGAAGCAGAATTTTTGAAATACCAGGAAGCTCTAACTGAACTGGCATCTGTCGTCAAgtcccacagcagcagcagcagcagcactccgAGCCAGTACCACCAGTCTGCAGCCAAAGACCTGACCAGCACCACGGAGCTTGcaagctcctcctcctcccccacccAAACCACCTACCTCACATCTTCAATGCAGCAGCGTAGCAAGCGGCCCGGACACTTCCTGGAGTTGAAGAACTTCAAAGACAACTACAACACTCTGGACAGCTCCTTCTGAAAACTTGTGATGCCCATCCAAAAGAAAGTTCAAAGACAAGTAGTGCTGCCAGTAATTAAAGTGCCTATGGACAACGGGTCACTGTCGCCAGATAGTTACGAGTGAAATGAAAAACTGCCTTCATGTATTAACACATATTGCCTGGTTTACAGTATAATGCATATCAGACTCAGTGCTCTTTACCTAAGTGTAGCTTATGCATATATCCTGTATAAATGCATGTTTGAGTGCTATAATTAGGTAGAAAAGTGACTATAATAAGTAGGGTTGATTTGACCAAAACAAAACCAGAGTCACATGGCTATGCAATGACATAAGACAATCATATTTATTGCAGTGTAAAGTCCTATGCAAACTTGTTAGAATTAACAGACTGTATTTAAACACGCTAATAGTTAAAGTTTGTAGAGAAAACAAGTATTAATGGTGGAAAAACACACTGGTTATGTCACTTAtgtttacatgtatgtatgtctttttttaagcCTTAAATGTTTGTCTTACAGAAGCCATACTTGATTTAATGAATTTTGATGATTAAGTGCTTTTTTGATTTAATCGTTCTCTCAGTGCAATGTAACAGTAACAGTATTCCAGTGCATTAATGCATTCTGAATGTTGCATCAGGGGAAGTCTCTTTCTGGACTTTAGTAGTCAGGGTTCCCAGTGAAGCATGTGATGTCCATGCttgaatcattttattttctttggtgCTTATTGTACAAGTATCCATCCAAATAAAACTGTGACGTACTGTCAAAATGTT

Function

NR:

description
PREDICTED: uncharacterized protein C1orf43 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806487.1 True 1773 mRNA 0.42 7 21764475 21767853
XM_039806488.1 False 1536 mRNA 0.43 7 21765233 21767853

Neighbor

gene id symbol gene type direction distance location
znf687a NA coding upstream 85617 21668490 ~ 21678858 (+)
LOC120563136 LOC103361607,LOC104959159 coding upstream 96644 21661202 ~ 21667831 (+)
LOC120561789 LOC103361609,LOC102785646,LOC102208248,LOC101464829,LOC100701476,LOC103478143,LOC106937891,LOC106916277 coding upstream 105945 21639092 ~ 21658530 (+)
LOC120561791 NA coding upstream 125735 21628731 ~ 21638740 (+)
rorc rorc,LOC102786611 coding upstream 137167 21608459 ~ 21627308 (+)
she LOC101483326,LOC102307252,LOC102202678 coding downstream 37221 21805074 ~ 21818222 (+)
chrnb2 chrnb2,LOC102780733,LOC104959165 coding downstream 50200 21818053 ~ 21835351 (+)
flad1 flad1,LOC102778463 coding downstream 122676 21890529 ~ 21900652 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding downstream 207339 21975192 ~ 22033267 (+)
efna1b efna1,LOC104918192 coding downstream 301153 22069006 ~ 22080302 (+)
LOC120562851 NA non-coding upstream 38770 21724948 ~ 21725705 (+)
G74288 NA non-coding upstream 472095 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 474161 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 475100 21289171 ~ 21289375 (+)
G74274 kiaa1429,LOC104941925 non-coding upstream 520908 21243229 ~ 21243567 (+)
G74673 NA non-coding downstream 268425 22036278 ~ 22036659 (+)
G74729 NA non-coding downstream 347763 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 351885 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 361799 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 415930 22183783 ~ 22184037 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 161017 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 348581 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 427810 21331412 ~ 21336665 (+)
sec61b sec61b,LOC102796100 other upstream 753061 21008013 ~ 21011414 (+)
glipr2l glipr2 other upstream 1159310 20600323 ~ 20605165 (+)
G74633 tuft1,LOC102781808 other downstream 1695 21769548 ~ 21770286 (+)
slc50a1 slc50a1 other downstream 315816 22083669 ~ 22091963 (+)
LOC120561539 NA other downstream 364725 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 369694 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 371927 22139780 ~ 22154684 (+)

Expression


Co-expression Network