LOC120562667 (LOC103369917,LOC102193495,LOC101464842,LOC108232169,LOC101465138,LOC102300261)


Basic Information

Item Value
gene id LOC120562667
gene name LOC103369917,LOC102193495,LOC101464842,LOC108232169,LOC101465138,LOC102300261
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 12808081 ~ 12819134 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806504.1
CCTGATATATCGGTGCTACTTTGCTTTAATCCTCGCAACATAATGTCTTCTGAAGAACTGTATCTGCTGTATCATGGACTTATGCTTCCTAAAGACATTCATTCCTTCGAGAGTTTGAAGTTTGCGCATGAATTCACGTTTAAAGACGAGGACGTCACGGTTGTCGTGTACCCGAAGTCAGGTACAATCTGGATGCAGGAGATCCTCCCACTGGTGCTGAATGGAGGGGATCTGACGCCGATCCAAACCATTCCTAACTGGGACAGGGTCCCCTGGCTGGAGGAGAAAAGATTAGCAATGGTTGTGGATCAGTTGGCATCTCCCCGGGCGCTGGTCACACATTTTCCTTACCGCCTCATGCCCCCTTCCTTCCACACCTCCAAAGCCAAGGTGATCTATGTCATGAGGAACCCTAAGGACATCATGGTGTCTTCATATTTCTTCCATCAGATGGCCGAATTCCTCGAGGATCCAGGAACCTTTGATGAATTCATGGATAAATTCCTTGAGGGCAGAGTATTGTTTGGAAAATGGACAGACCATGTGAAGGGCTGGAGAGACACACAGCTGGGAGACAGAATAATGTACATCACTTATGAAGAAATGGCTAAGGACCTCCCTGCAGCTGTCAGGTCTATCTCAGATTTTCTGGGCCGTAATCTGAGTGAAGAAGTCATTCAGAAGATAGCAGAACATTGCTCCTTCAAGACCATGAAGACCAACAAAATGTCCAACTTCAGCCTGGTCCCTAAGGAGTACATGAACCCCGACAAATCTCCCTTCTTCAGGAAAGgTGTTGCCGGAGACTGGGAAAACCATTTTAGCTCAGAGCAACTGGCCAGATTCACATCGGCCATTCGCAAAGAGCTGGAGGGTGAGAGCTTCTCTCTGCCATGGAGCATGGATTGACCATCAACCAAagcaaagagagagggaaagatttgtagaaataaaatcaagTGGGAAATCGGTTATAACGAGGCCAAAATTTACTTTTGGTTTTAATACTAGGCATATGACTAAAagcattttattgattttaaaaactCTAAACATGGTTAAAACAACCATGACTTGCATTATAGCAAAACATAAAtgttattaaacagaaaatatttttttgtgctaA
>XM_039806505.1
TCAGGCaaaccatttctttaaacccagCCCTCATCTTATGTGGAGGTTACACCCCTGAAATAGAAAACAGATGATGATTCGCAGGACAGATTTGTACAAAAAAATGtacaaggaaaaaaaagtgatacagcCCTGCCAGCTGGCCAACAAAGAGGAGCTCAGAGAAAAGGGACTATAGGTAACCAGAGAAACTCCAAGAATACctcagagagagagtgaaaaagGAAGGAGCAACGTTTAGGCTACCAGACTGCGAGACGGCAAGCATACCAGACCTCAAACAGGCCACAACTCGCTTGCAGCGCTTTAAACCCCTGAGCCAGGCACAATCATGACGTCCTCAACTGAATATATTCAGTACCACGGAATTCTGCTGCCCCTTCAAGCTCACAGCAAGGAGAGCTTGGAGTACGCCGAAAATTTCTCTGTGAAAGACACCGATGTATTTGCTGTGACTTACCCCAAGTCAGGTACAATCTGGATGCAGGAGATCCTCCCACTGGTGCTGAATGGAGGGGATCTGACGCCGATCCAAACCATTCCTAACTGGGACAGGGTCCCCTGGCTGGAGGAGAAAAGATTAGCAATGGTTGTGGATCAGTTGGCATCTCCCCGGGCGCTGGTCACACATTTTCCTTACCGCCTCATGCCCCCTTCCTTCCACACCTCCAAAGCCAAGGTGATCTATGTCATGAGGAACCCTAAGGACATCATGGTGTCTTCATATTTCTTCCATCAGATGGCCGAATTCCTCGAGGATCCAGGAACCTTTGATGAATTCATGGATAAATTCCTTGAGGGCAGAGTATTGTTTGGAAAATGGACAGACCATGTGAAGGGCTGGAGAGACACACAGCTGGGAGACAGAATAATGTACATCACTTATGAAGAAATGGCTAAGGACCTCCCTGCAGCTGTCAGGTCTATCTCAGATTTTCTGGGCCGTAATCTGAGTGAAGAAGTCATTCAGAAGATAGCAGAACATTGCTCCTTCAAGACCATGAAGACCAACAAAATGTCCAACTTCAGCCTGGTCCCTAAGGAGTACATGAACCCCGACAAATCTCCCTTCTTCAGGAAAGgTGTTGCCGGAGACTGGGAAAACCATTTTAGCTCAGAGCAACTGGCCAGATTCACATCGGCCATTCGCAAAGAGCTGGAGGGTGAGAGCTTCTCTCTGCCATGGAGCATGGATTGACCATCAACCAAagcaaagagagagggaaagatttgtagaaataaaatcaagTGGGAAATCGGTTATAACGAGGCCAAAATTTACTTTTGGTTTTAATACTAGGCATATGACTAAAagcattttattgattttaaaaactCTAAACATGGTTAAAACAACCATGACTTGCATTATAGCAAAACATAAAtgttattaaacagaaaatatttttttgtgctaA
>XM_039806506.1
cataaCGTGTTCgccacagaagtaaaggctgtaGAGCCGTTTGGAGCAgcttgtgaacagtgttttctggtggagatgGTACAATCTGGATGCAGGAGATCCTCCCACTGGTGCTGAATGGAGGGGATCTGACGCCGATCCAAACCATTCCTAACTGGGACAGGGTCCCCTGGCTGGAGGAGAAAAGATTAGCAATGGTTGTGGATCAGTTGGCATCTCCCCGGGCGCTGGTCACACATTTTCCTTACCGCCTCATGCCCCCTTCCTTCCACACCTCCAAAGCCAAGGTGATCTATGTCATGAGGAACCCTAAGGACATCATGGTGTCTTCATATTTCTTCCATCAGATGGCCGAATTCCTCGAGGATCCAGGAACCTTTGATGAATTCATGGATAAATTCCTTGAGGGCAGAGTATTGTTTGGAAAATGGACAGACCATGTGAAGGGCTGGAGAGACACACAGCTGGGAGACAGAATAATGTACATCACTTATGAAGAAATGGCTAAGGACCTCCCTGCAGCTGTCAGGTCTATCTCAGATTTTCTGGGCCGTAATCTGAGTGAAGAAGTCATTCAGAAGATAGCAGAACATTGCTCCTTCAAGACCATGAAGACCAACAAAATGTCCAACTTCAGCCTGGTCCCTAAGGAGTACATGAACCCCGACAAATCTCCCTTCTTCAGGAAAGgTGTTGCCGGAGACTGGGAAAACCATTTTAGCTCAGAGCAACTGGCCAGATTCACATCGGCCATTCGCAAAGAGCTGGAGGGTGAGAGCTTCTCTCTGCCATGGAGCATGGATTGACCATCAACCAAagcaaagagagagggaaagatttgtagaaataaaatcaagTGGGAAATCGGTTATAACGAGGCCAAAATTTACTTTTGGTTTTAATACTAGGCATATGACTAAAagcattttattgattttaaaaactCTAAACATGGTTAAAACAACCATGACTTGCATTATAGCAAAACATAAAtgttattaaacagaaaatatttttttgtgctaA

Function

NR:

description
PREDICTED: sulfotransferase family cytosolic 2B member 1-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG:

id description
K01015 SULT2B; alcohol sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806504.1 False 1129 mRNA 0.44 6 12813399 12819134
XM_039806505.1 True 1418 mRNA 0.45 6 12811913 12819134
XM_039806506.1 False 1026 mRNA 0.45 6 12808081 12819134

Neighbor

gene id symbol gene type direction distance location
LOC120562668 LOC103369917 coding upstream 465 12802476 ~ 12807616 (+)
tmem147 tmem147,LOC106605633 coding upstream 19531 12783819 ~ 12788550 (+)
LOC120561926 NA coding upstream 25851 12780215 ~ 12782230 (+)
gapdhs gapdhs,LOC106526031,LOC103369915 coding upstream 30355 12773881 ~ 12777726 (+)
hpn hpn coding upstream 131091 12659516 ~ 12676990 (+)
ncam3 LOC104959682 coding downstream 23627 12842761 ~ 12848460 (+)
mroh1 NA coding downstream 32624 12851758 ~ 12881403 (+)
ulk4 ulk4,LOC104943585 coding downstream 179016 12998150 ~ 13100469 (+)
cmtm8b cmtm8 coding downstream 392445 13211579 ~ 13215355 (+)
LOC120561555 ncoa7,LOC104938018 coding downstream 419980 13239114 ~ 13243225 (+)
G72117 NA non-coding upstream 29639 12778230 ~ 12778442 (+)
G72036 NA non-coding upstream 168292 12639314 ~ 12639789 (+)
G72028 NA non-coding upstream 211422 12594584 ~ 12596659 (+)
G72018 NA non-coding upstream 267530 12537310 ~ 12540551 (+)
G72006 NA non-coding upstream 288076 12518663 ~ 12520005 (+)
G72134 NA non-coding downstream 7517 12826651 ~ 12883769 (+)
LOC120563130 NA non-coding downstream 29341 12848475 ~ 12851077 (+)
LOC120562936 NA non-coding downstream 77176 12896310 ~ 12945988 (+)
G72198 NA non-coding downstream 293081 13112215 ~ 13120101 (+)
G72199 NA non-coding downstream 300503 13119637 ~ 13124527 (+)
LOC120562335 NA other upstream 34642 12760817 ~ 12773439 (+)
LOC120563165 scx other upstream 78855 12711602 ~ 12729226 (+)
LOC120561922 NA other upstream 1097823 11708381 ~ 11710258 (+)
G71896 LOC103388795 other upstream 1191839 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 1208855 11537184 ~ 11599226 (+)
G72204 ctnnb1,LOC103388302 other downstream 305800 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 426534 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 649077 13468211 ~ 13471516 (+)
LOC120562530 ext1,LOC103135121 other downstream 740626 13559760 ~ 13606245 (+)
LOC120562711 eif3h other downstream 805314 13624448 ~ 13688514 (+)

Expression


Co-expression Network