Item | Value |
---|---|
gene id | clstn3 |
gene name | clstn3,LOC102784285 |
gene type | coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053118.1 |
NCBI id | CM020915.1 |
chromosome length | 43092710 |
location | 24074083 ~ 24098119 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
symbol | description |
---|---|
clstn3 | Predicted to enable calcium ion binding activity. Acts upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in Golgi membrane; cell projection; and synapse. Predicted to be integral component of membrane. Predicted to be active in cell surface and postsynaptic membrane. Is expressed in forebrain; hindbrain; midbrain; spinal cord; and telencephalon. Orthologous to human CLSTN3 (calsyntenin 3). |
description |
---|
PREDICTED: calsyntenin-3 isoform X1 |
id | description |
---|---|
K22661 | CLSTN3; calsyntenin 3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_039806547.1 | True | 5149 | mRNA | 0.50 | 19 | 24074083 | 24098119 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC120563208 | NA | coding | upstream | 19755 | 24054272 ~ 24054328 (+) |
LOC120562699 | eno2 | coding | upstream | 48229 | 24019895 ~ 24025854 (+) |
mlf2 | mlf2 | coding | upstream | 54988 | 24010883 ~ 24019095 (+) |
wnt4b | LOC104932544,LOC103356104,LOC101479331 | coding | upstream | 71539 | 23998435 ~ 24002544 (+) |
LOC120562185 | NA | coding | upstream | 136262 | 23921770 ~ 23937821 (+) |
pex5 | pex5,LOC102783438 | coding | downstream | 1702 | 24099821 ~ 24113212 (+) |
cdca3 | NA | coding | downstream | 17384 | 24115503 ~ 24118065 (+) |
usp5 | usp5,LOC102781302 | coding | downstream | 37570 | 24135689 ~ 24151437 (+) |
cd4-2.2 | NA | coding | downstream | 53617 | 24151736 ~ 24162316 (+) |
cd4-1 | NA | coding | downstream | 65026 | 24163145 ~ 24180552 (+) |
G75523 | tpi1,tpi,LOC102304959 | non-coding | upstream | 21127 | 24048925 ~ 24052956 (+) |
G75517 | NA | non-coding | upstream | 42744 | 24027883 ~ 24031339 (+) |
G75493 | NA | non-coding | upstream | 98349 | 23972327 ~ 23975734 (+) |
G75483 | ptpn6 | non-coding | upstream | 125680 | 23943493 ~ 23948403 (+) |
G75427 | NA | non-coding | upstream | 189452 | 23883177 ~ 23884631 (+) |
G75582 | gnb3,LOC103375278 | non-coding | downstream | 21198 | 24119317 ~ 24122009 (+) |
G75583 | NA | non-coding | downstream | 23908 | 24122027 ~ 24125081 (+) |
G75611 | NA | non-coding | downstream | 118021 | 24216140 ~ 24216569 (+) |
G75622 | flot1,LOC108235422 | non-coding | downstream | 197719 | 24295838 ~ 24296723 (+) |
LOC120562289 | NA | non-coding | downstream | 370715 | 24468834 ~ 24488842 (+) |
lpcat3 | lpcat3 | other | upstream | 385 | 24056437 ~ 24073698 (+) |
atn1 | atn1 | other | upstream | 34656 | 24026915 ~ 24039427 (+) |
LOC120563047 | vamp1,LOC104928996 | other | upstream | 194668 | 23873909 ~ 23879415 (+) |
LOC120563204 | NA | other | upstream | 260675 | 23768233 ~ 23813408 (+) |
casp2 | casp2,LOC102795506,LOC103369458 | other | upstream | 422587 | 23641555 ~ 23651496 (+) |
G75644 | NA | other | downstream | 337020 | 24435139 ~ 24436819 (+) |
dedd1 | dedd2 | other | downstream | 422616 | 24520735 ~ 24534276 (+) |
grik5 | grik5 | other | downstream | 708170 | 24806289 ~ 24885373 (+) |
LOC120561858 | NA | other | downstream | 817135 | 24915254 ~ 24996309 (+) |
LOC120561674 | LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 | other | downstream | 1276088 | 25374207 ~ 25380798 (+) |