LOC120562714 (grik3,LOC102778608)


Basic Information

Item Value
gene id LOC120562714
gene name grik3,LOC102778608
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 26316867 ~ 26427652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806565.1
ACGCGTGCCTCTAGTGGCACCGTGAAAGGATTCTCGTCAGACGCACGCAGATGCACGGCTTTCTGCACTCCCTTTCCATCCAGCTCAAActagaagatttttttttaatatgaacACTTTGTAACAAGGAGCCTTTTTGAACAGATTTGGACGTTCTTCAATAATCAGCCTTGTGCCATCACCGTGCGCAACTGGAGTGGAGCGGAGCGGCTGCACCTTTCACAAAGTACCTCTGTGTTATATGAACAGTTTCCATGACTGGAATGGGAGACTGGAGTGATTAAACTGCAATACGCATTTTTTGAATGTGCGTTCATATCCCTCAGCAGTCAGCACTCATCGTGTGAcgcttttctctgtttctctttcggGCGACAGAATCGTTCGAGGCGACCCAAAGTTCCGCAGGCGCAGTTCTCCTCCTCCATAGGGGTGCGGGAGTCCGGCTCGGCTGTTGCCGTGGTACTTGCCAGCAGCCAGATAGCATCAGCGGTAAGAGGGGATACAGAGACTCCTGCAGGCTAATTGTAGCAGCCTGCGTTCGCAGGTGTATCACTGATCCGTCTGTAAGGGACTGGGGGGTTCATTCTGATCGAGCCGCTCTCAGACTTGTgaggaacagaaaaaaaaagaagaaaaaaaaacctgagaGAATGTTGCACCAAGTACAATGACCGCAAATTTGTCGCAGACACCAAAATCCATATGTGCTCCGTCGAATTCAGTTTTGATGAGCAATTCTGAGTCGTCTTTGGAATTTTAAAAAGTGGATCACGCGACTTTACAACCATGCGAAATACTTGGCTGTCTCCCCGGAGTGCGATGTGGGAATACTGGACATCGCTGATTGCATGTCTCTTTTGGATTCACTACTCTAACGGGATGCCTCATGTTATTCGAATAGGTGGGATTTTCGAACAAACAGATGGACCTGTTTCACTTGTTAGCGCTGAGGAGCTTGCCTTTAAATTTGCTGTCAATAACATTAACAGAAACAGGACTTTGTTGCCAAACACAACATTAACATATGACATACAGAGGATTAATATCTACGACAGTTTTGAGGCGTCAAGAAAAGCTTGTGACCAGCTATCTTTAGGTGTGGTTGCAATATTTGGGCCCTCACATAGTTCATCGTCAAATGCTGTGCAGTCCATCTGCAATGCGTTGGAAGTGCCACACATCCAGGTGCGGTGGAAACATCACCCCATGGACAACAGGGACAGCTTTTATGCCAATTTATACCCAGATTATTCTTCACTAAGCTATGCTATCCTGGACCTGGTGCAGTTTCTCAAATGGAAAACAGCCACTGTCGTCTACGATGACAGCACAGGTCTTATACGACTACAGGAGCTAATAATGGCCCCATCCAGGTACAACATTAGGCTAAAGATCCGTCAGCTTCCTCTTGACACACAGGATACGAGACCACTTCTCAAAGAAATGAAGAGAAGCCGGGAGTTTCGGATAATCTTTGACTGCAGTCACCACATGGCTGCACAGATTCTCAAACAGGCCCAGACCATGGGGATGATGACAGAGTATTACCACTATATCTTCACCACTCTGGACCTGATGGCCATTGACCTGGAGCCGTATCGCTTCTGTGGTGTCAACATGACCGGCTTCCGCATCCTCAATGTGGATAATCCCCAGGTCGCATCCATTGTGGAGAAATGGTCGATGGAAAGGCAGATGCCCCCTAAACCTGACTCAGGCCTCCTGGAGGGCATCATGACGACAGATGCGGCCCTGACCTATGATGCAGTCCACATTGTATCCGTCTCATACCAGCACGCTCCACAGATGACGGTAAACTCGCTGCAGTGCCACCGCCACAAACCCTGGAGATTCGGAGGGCGCTTCATGAGTTTTATCAAAGAGTCCCACTGGGATGGTTTGACGGGGAGACTGTCATTCAACAAGACAAGTGGTCTACGTACAGACTTCGACCTGGACATCGTCAGTCTAAAGGAGGACGGACTTGAAAAGGTGGGGAAGTGGAGTGTGTCGGGAGGTCTTAATATCACAGAGTTGCCGAAGCGAAAAGGGATGAACATCACTGATTCCCTGGCTAACCGCTCCCTCGTCATCACAACTATTCTGGAGGAGCCATACGTCATGCTTAAGAAGTCTGACAAGGCGCTGGTTGGGAACGACCGTTTTGAAGGATTCTGCATCGACTTGCTCAAAGAGCTGGCCAACGTCCTGGGCTTCACGTATGAGATCCGCCTGGTGCCTGATGGGAGATATGGCTCTCAGGACGACAAGGGCCAGTGGAATGGCATGATCAGGGAACTTATAGAGCATAGAGCAGACTTGGCAGTGGCTCCTCTCACCATTACCTACATGCGTGAAAAGGTCATCGACTTCTCAAAGCCCTTCATGAGCATGGGAATAAGCATTGTGTATCGCAAACCCAATGCCACCAACAACGGCTTCTTCTCCTTCCTGAACCCTATGACTCCTGACATCTGGGTCTACATCCTGTTGGCCTACCTGGGTGTTAGCTGTGTCCTTTTTGTCATTGCCAGGTTCAGCCCGTATGAATGGTACGACGCTCATCCTTGTAACCCCGGATCAGATGTGGTGGAGAACAACTTTACCCTCCTCAACAGCTTCTGGTTTGGAGTCGGTTCCTTAATGCAACAAGGCTCAGAACTGATGCCCAAAGCCCTGTCGACCAGGATCATCGGTGGGATCTGGTGGTTCTTCACactcatcatcatatcatcctATACGGCTAATTTAGCAGCTTTTCTCACTGTGGAGAGAATGGACTCGCCTGTGGACTCAGCCGATGACATCGCTAAGCAGACCAAGATTGAGTATGGTGTGGTCAAAGATGGCGCAACCATGTCTTTCTTCAAGAAATCTAAGGTTTCTACTTTTGAGAAGATGTGGGCCTTTATGAGCAGCAAGCCGAGCACATCACTGGTAAAGTCTATTGAGGATGGGATTCAGAGGGTGCTGAAGTCAGACTATGCCCTCATTATGGAGTCCACAACTATCGATTACATTACTAGGAGGAACTGTAACCTTACACAGGTGGGAGGGATCATCGACAGCAAAGGCTATGGCATCGGCACTCCCCTTGGCTCCCCTTACAGAGACAAAATCACCATAGCAATCCTAAGCATCTTGGAGGATGGGCGCCTACACATGCTGAAGGAGAAGTGGTGGAGTGGGAGCAGCTGCTTGGATGAAGAACGTCACGAGACGGGCCCCATGGGTATTCAAAACCTGGGTGGTATATTCATTGTGCTGGCATCTGGCCTAGTGCTGTCTGTTTTTGTGGCGATTGCTGAATTCATCTACAAGCTAAGGAAGACTGCAGATCGTGAGCAGGTCTTTGTGCAGTGCCATGGTGGACGAGATCAGACTGTCGTTCACCTGCGAGAGGCGGGTGAAACACAAGCCTCAGCCTCCAGCCATGGTGAAGACGGATGCAGTGATCAACATGCACGCTTACAACGACCGACGACTCCCAGGAAAGGACAACTTGAGCTGCAGCACTGGGATGACTCCCGTGTTCCCATGACAATGTGCTCCCCACAGGGCAAGACCCTCCTGAGCAACGTGTCAGGGGCCATGCCAGAGACTAGAGACAATGGCATAGATGGGATCACCAGATTCACCATTAACCACAGTGACATGGGGACACTAACTAAACATGGGCATCTCAAAATGGCAGCATCAGCCACACAGGTATGACAACATTCACCACTGTATTCCAAATCACAAGAGGTTAAAGTAATAATTGGGGGAGGTTCTGGGAAAACAGTATACCCAAATAATCAGTTTCAAGTCTGATGTTTACGTGcgcaacacaaaaacacaagaaaatacACATTGTTCAAGGAGTGCTAAATCAGTGAAAAGGCTGAGAATTGTATTGAAAATATggactgaagaagaagaaagtttgTTAAAAATGGCAATAAATGAAAGATAGAGGACAAGGAAGAGCAGTTTTCATTGGAGATCAGTTTTGCTACACATTAATATTATGATATCAAGTTCTCACCTTTATCCTGCTAATTTACACAAACTCCCAAATGGCCTTTGAAGGCAGAAAATAACGTTACCTCAAACATGTTGTCGAGGCAAAAATGGTTATCTTTGAGTCATAAGCTGAAGGATATGAGACAGGACCTTTTGAAAGCATGGTTCACAGGCACACATGTGATAACCTGTAAGAAAACTCTTTTAGTATCTGCagcattgttgttgttggaaaCCCATAGAGACACAACTGTTCAGCAGTAAATATGTTTGTTAAAGTTGTCATGTGAAATTAACTATATTGTTACACACAAGCAAATACTCATTGATGAAGAGATTGATTTGAGCAAAAGTACATTTTATGTCAAAATTATTTTGTACATGGTTGtattttaatcagtttaataTTGATTGCCAAAGATCTGACCATTCAACAGAACtagatacagtacagtataggcCAGTTccttctatttttttctttttagagaGCACTAATCTTGCGTTCAATGCAAAGTAAATTGAAGTGGTTTAAATGGGACGATTAAGGGATCTTGCTATAACAGTTTTTCCAACCATGCAGGGTAATATTTTTCCAAAGTATATTGCAATTGGCACAGTAGTGGCACTGGATTTGCAAACCAATTTACCTTAAAGTGCAGTATTGCTATTAACACTGTAATGTAAAACAATCATTGCATAagaatcgaaaaaaaaacagcatgtccATTTACCAATAGAACGTCTTTCTTAAAACACAACCTTGGTCCTGTGTAATTTGCAAAATGATAAATCACGAAAATATTGAGCTATTACATGAACCAATTTCAAaagtttgtgctcacctttgATACAAATGGTAGCATGTCTGCACATATATGTACATacaaaaacatatatacacatgtatgtGCAGACTGGGTTGGAAGGCATTGGATCaggtatttctgtatttttgtttaataacTAATTGTAAATCACAGAGACAAAATGTATGAGACTGTGACCTAAAAAGtaaagtgcattttttttttactgcatttAATTGTGACTTAGCCATCAAAGTATGTGCAGGACTTGTGTGGCTACAGGACCTTTGAATGTCCAAAATACttctaaacacatttttgaaCAGTTCATTTTTCAGGTGTGATCTAGAGGCTTTTTGGCAGGAAACCTTTTGTTTTGCATTATGAGCATTCTGAATACTGAGCGTGgttttgattttaaatgttaACAGACTTTTGAAGGTTATCTCAGACTTTAAAGtcttctgtttttctgtttaattGCCTGATGTGGACAGAATAAATTCATAGGTGTAGTGTATGAACATGCGGAAAGATAATgtggtgaaaagaaaaaagacatgatTATTTTGTGTGGTCATGTTGACTTTAATGCctattgagtaaatgtactgtacatcttCAGCAAATGTCATGATGTAGGAAGATTCGAGGAGTCTGTGAGCTGCTGTCACCCGGGAGCCGAACGAACAGCAAACCTCCGTGAGGTTTATGTTGTCGATATGTCAAGACTAAAAAAACTTAACTATATGATTCAAGAAAACTCCAATCTGTAAAACTTAGCCTTGGTTTGGTAGAGATTCACTCTATAATTGTCTATGGATTCCCTTCTGCAAAGTAGAGTATGTAGATAAGATCCgcaggagaaaaaaatgtattttgctaAATTTATACGGTTATAAATGAATTCTGTTCACAGTCAAATATGTTATAGATGCTATTTATTTCATTAGAGAGGTCACTTTAACCTACTTCCTCACTTTACCCCAGTTCCACAGCCCCAAACcttatttatttaatcaaaatGCATTATATTATGGTATATTGGATTACTATCATTCAGATGGGAAACTGTATGTAAATCGTCTTTTATGATGGCTGGCAGATTTCTATAAGGTGAACATGAAATGGAAATGTGGAGCTTCCCCAAGAATTTAGGGGACGTATCTTAGAATAGGGAGAATAGGGTTTATCTTGTGTAACTGGACCTTTACTGTTCCTGAAATCCCAATTAGGACCTGGTCTAAAGTATTGCCGCGGCTGATGCGTGGTTGTACAATATTACTGTTACCCTAATGTGTACTGTAGCTTTCCATGCAGGTGATTCAAAGACTCAAGTTTGTTTGTATTTCACCTCTGTAATATGTGAAAATAATTGAAAATGTCATCACAATCAAAATCAGTTGGAATTACAACAGGCTTTCTGATTTAACTGATTCAGTCAGTTTGGTTACTGAatatacatcttttttttatagattaatGTGAATAATAATGTCATTTTACACAAAAATTGTATGAAACGTGAGagaaaagtaatgcaaaatGTAAGCTACATGACCTGTGTTCCATTAGCAGTGTGTGATATGAGTTCTGATTTTCCAGCAGTCACAAAGGTATGCCTTTTTATGCATACCTTTCTTTTGAGTTGCGCAGCTTCTATTATTTGGCAGAAAACCTCTCAAACAATACGATGAATATGTTGGTGCCAACCAGGGTTTTCTTTGTGGACATGCAGAATTTCTATGAATATAGTTTTTGTaaggttttgtaaaaaaaacaggaaaaaaaagattttgctTTCCTAGTAACTGTATGTGTTAAGAGAACATTAGAATAACCAACATCTGAGTCAAACATGGGAAAATTCAACTAAATATTATAGAAAAGCTATcgaattattttctttttaacacatTGTGAATAATTCAATTGTACAGTTTGCTGTATGGGTTATATGaagatttaaataaaaaatacaaactatATATCCTGATGA

Function

symbol description
grik3 Enables adenylate cyclase inhibiting G protein-coupled glutamate receptor activity and kainate selective glutamate receptor activity. Involved in G protein-coupled glutamate receptor signaling pathway. Acts upstream of or within regulation of membrane potential. Is integral component of plasma membrane.

NR:

description
PREDICTED: glutamate receptor ionotropic, kainate 3-like

GO: NA

KEGG:

id description
K05203 GRIK3; glutamate receptor, ionotropic kainate 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806565.1 True 6816 mRNA 0.42 16 26316867 26427652

Neighbor

gene id symbol gene type direction distance location
LOC120563082 NA coding upstream 144453 26168464 ~ 26172414 (+)
LOC120561982 maneal,LOC102777073 coding upstream 212183 26088953 ~ 26104684 (+)
smpdl3b smpdl3b coding upstream 248513 26065023 ~ 26068354 (+)
themis2 NA coding upstream 258436 26050653 ~ 26058431 (+)
LOC120563139 LOC106907557,LOC103141567,LOC106948827,LOC107084787,LOC103477829,LOC102227399,LOC102310127,LOC102211983 coding upstream 272487 26030763 ~ 26044380 (+)
LOC120562650 NA coding downstream 184334 26611986 ~ 26613382 (+)
csf3r NA coding downstream 194695 26622347 ~ 26634300 (+)
mrps15 mrps15,LOC102779357 coding downstream 208025 26635677 ~ 26644227 (+)
oscp1b oscp1,LOC106583166,LOC102779645 coding downstream 220560 26648212 ~ 26655099 (+)
stk40 stk40,LOC103141542 coding downstream 229301 26656953 ~ 26675492 (+)
G76251 NA non-coding upstream 30367 26286300 ~ 26286500 (+)
G76246 NA non-coding upstream 101502 26215081 ~ 26215365 (+)
LOC120563083 NA non-coding upstream 149180 26155861 ~ 26167687 (+)
G76193 NA non-coding upstream 163564 26151993 ~ 26153303 (+)
G76180 NA non-coding upstream 204362 26110603 ~ 26112505 (+)
LOC120562862 NA non-coding downstream 149060 26576712 ~ 26600111 (+)
G76276 NA non-coding downstream 249343 26676995 ~ 26677217 (+)
G76313 NA non-coding downstream 303654 26731306 ~ 26732902 (+)
G76338 NA non-coding downstream 437068 26864720 ~ 26865555 (+)
G76393 NA non-coding downstream 587488 27015140 ~ 27016107 (+)
G76192 NA other upstream 174240 26139901 ~ 26142627 (+)
taf12 taf12 other upstream 521348 25792818 ~ 25795519 (+)
apoc2 NA other upstream 812815 25502600 ~ 25504052 (+)
apoc1 NA other upstream 823605 25491784 ~ 25493262 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other upstream 936069 25374207 ~ 25380798 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other downstream 217732 26645384 ~ 26647615 (+)
G76315 NA other downstream 380466 26808118 ~ 26815391 (+)
G76355 snip1 other downstream 455798 26883450 ~ 26886546 (+)
G76417 NA other downstream 856886 27284538 ~ 27288457 (+)
fam110d LOC104924711,LOC103367059 other downstream 1439792 27867444 ~ 27885464 (+)

Expression


Co-expression Network