si:ch211-120k19.1 (LOC103388283,LOC101483136)


Basic Information

Item Value
gene id si:ch211-120k19.1
gene name LOC103388283,LOC101483136
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22827807 ~ 22830355 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806580.1
GTCAGAGGAGCTACGCTGAAAGATTTTTCACCATGAACCGGGCCTGGGCTGTTTTCAAGGCTCATCCGTACATCAGTAACGTCCTGGGATACACAACGCTATTTGCCTCTGCTGACCTCATACAACAGAGTGTGCTGGGTGGTAAACAAACTGCAGGATCCACATCAGAGGATTCGGCTGGCATCGACTGGTGTCAGACAGCTCGAGTGGCGACTGTCGGCTTCTGTTTCCATGCCAACTTCAACTACCAGTGGCTCCGAGGGCTGGAGAGGATGCTGCCAGGAGGCGGAGTGAAGGCAGTGACAGGGAAAGTTGTTGTGGATCAGCTGATCGCAGCTCCTCTCACCATCAGTGCCTTTTATATTGGTTTAAGTTTACTAGAAAACAAAGACGACCCTCTTGAAGACTGGAGACACAAATTCTGGACATCTTACAAGACTGGAGTGGTATTTTGGTCAACAATGCAGGCAGTGAACTTTGCCCTGGTGCCCCCTGTGGCACGGACAGTGTTTCTGGGAGGCATCGCACTGACTTTCACTATCTACCTGTGTCACCTCAGACAGCAGAGTGGCCACAAACTCGAATAAACTTGAGTCCTGAGTTTTTGTACTGACATTAAAAGGCTTATTTAACGGCAGAATACAGTTTCAAAGTCATTAGATTTACcgagaaaacaaggaaatacACATTTATGTGAATCAGCTGATTAGCCCACATGGGTTATTCTTCAGCTGTGATTTGTTTCCTCATTTAACAGTTTCAGTGCATCATGGAATAACTTTGTTGATGTTGCAATAGATTTTTAACCaataatacttttttaaaagctatttgtttaaaagaaaagtcatttgtggttttgtttttgaaccTTTTATCAACAAGCAAATTGTAGGCTCTAATCATGTGAATTGCTGCTTGTGTCATATACATTCCTGAAACTGAACTTCATATTTGTGGCACCTCTTACTGCAATAAGGgttttgaaaaaagtattatatataaatagtcCAAAAATGATTGATGTGgactaacaaaacaaacaaacatgtagGCTATGGCAAACCAAACAAAAATGCAGCCACTCTCTCATTTCAATGAAGAGCTTCTAAATAAACATATAGCCTAAAGATTAGATCGGATGACGTTGTAGCCAGTAGCCTGACGATGTGTATGAGAACTGACTGTCCGTCAAGATCAAAGTAGGCTATCAAGATGCCAAGTCGCGTGGCCATGATGGTGCAGCTCCTCCAAAGAGGAGAAGGGTCCAAAGAGCGCACCATTAGCTTAAACCACGTAAATGCCATAGGTAGCCTAAATTAGTGATCGCTGGTGTGAAGAAGTACGGAGCCGCGCAAAATATTGCAGGGATCGCCAAACTTATTACTTGGGAATGCAAAACATATTGCGAGGGAACGCAAAAAATCTCCTAGAGTGCAGCTCTCACTCCATTGTTTTGTGTCATATTTTCAATTGTATTTTAGTGTTTATTTTCTAGACTAGGCCTATTTATGGAAGATGCATGGTTTTCTTtcaatggactgtttttatatagcacttttctagttTTAACAAC

Function

NR:

description
mpv17-like protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806580.1 True 1576 mRNA 0.42 5 22827807 22830355

Neighbor

gene id symbol gene type direction distance location
kcnj14 kcnj14,LOC104949235,LOC102784483 coding upstream 43388 22767127 ~ 22784419 (+)
LOC120562542 LOC100712213,LOC102785254,LOC101485676,LOC102294439 coding upstream 87097 22733327 ~ 22740710 (+)
zbtb7b LOC104949237,LOC102209066,LOC102295659,LOC100711944 coding upstream 95366 22710139 ~ 22732441 (+)
pklr LOC100711399,LOC101487503,LOC102296262,LOC108235536 coding upstream 139847 22674277 ~ 22687960 (+)
LOC120562535 LOC103478110,LOC102236274,LOC103136813,LOC106922010,LOC106957061,LOC107088793 coding upstream 153673 22667916 ~ 22674134 (+)
rpl18 rpl18 coding downstream 2001 22832356 ~ 22837799 (+)
sphk2 LOC104960464,LOC103388269,LOC106096428 coding downstream 8050 22838405 ~ 22849527 (+)
cyth2 cyth2,LOC103136639,LOC106520542,LOC107088802 coding downstream 22003 22852358 ~ 22864843 (+)
zgc:158689 LOC104960461,LOC101078804 coding downstream 47676 22878031 ~ 22887878 (+)
tfpt tfpt,LOC102781997 coding downstream 62744 22893099 ~ 22898869 (+)
G74769 NA non-coding upstream 572329 22255271 ~ 22255478 (+)
G74765 NA non-coding upstream 582044 22245489 ~ 22245763 (+)
G74764 NA non-coding upstream 584774 22242817 ~ 22243033 (+)
G74760 NA non-coding upstream 643770 22183783 ~ 22184037 (+)
G74737 NA non-coding upstream 697893 22129652 ~ 22129914 (+)
G75042 NA non-coding downstream 88397 22918752 ~ 22920103 (+)
G75045 NA non-coding downstream 94237 22924592 ~ 22925155 (+)
G75065 NA non-coding downstream 152537 22982892 ~ 22987322 (+)
G75069 NA non-coding downstream 164065 22994420 ~ 22994706 (+)
G75077 LOC104960445 non-coding downstream 186452 23016807 ~ 23018595 (+)
myh14 NA other upstream 7754 22785578 ~ 22820053 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other upstream 122391 22689070 ~ 22705416 (+)
LOC120562537 NA other upstream 159922 22660479 ~ 22667885 (+)
arnt NA other upstream 201854 22610018 ~ 22625953 (+)
celf3b LOC104944900,LOC100708447,LOC107088821,LOC107379582 other upstream 242235 22559944 ~ 22585572 (+)
cnot3a cnot3 other downstream 69734 22900089 ~ 22911520 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other downstream 240232 23070587 ~ 23083147 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other downstream 660770 23491125 ~ 23494034 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other downstream 730493 23560848 ~ 23571243 (+)
casp2 casp2,LOC102795506,LOC103369458 other downstream 811200 23641555 ~ 23651496 (+)

Expression


Co-expression Network