bcl3 (bcl3)


Basic Information

Item Value
gene id bcl3
gene name bcl3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 25400240 ~ 25422572 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806603.1
GAAACAGCTACCTGCAGTTGTAGTCTACTGTATGTGGACTGGGACACACACATGATCTACACCAAACTTCTATCGGCTGTTCTTCGAAAAATAGCCTGTTTGCATGAAGAGTCAATTACTTTGAACGCGTATCTAAAACACACCAGTGACACAAAAGGAAACAGAGTGATGCTTTGATCGCTGCCCATTTGATTTCATGGGGATGGGAGAAGCGCACTTGGCCACTTTGGGTGGACTGATCCCAGCAAACTGTCATTGAACGTTGAGAGGGTTACGCGCATACACCTGAAACTTCTTCCGATCCGGAGCGCCTCGTCCCCGGTTGATGCCGAGGATCATGACCATGAACGGTGACCAACAGTCGGTTGCCGGCGCACCGCTGGATCTGCGCACCACTAACCGAGAGCGTGGGAGCGCCGGGTCGAGGACTGCGGACTGTAAAGGTCGCTCCAAGGACGCTCGGGTGACAGGAGTCTCACCCGCACCCCCCGCGTGCACAGGCACGGACAGTTTGGAAATACACTGCCCCACGGTCCGAAGCTCACCGGGCACAGAAACCGGCGCTGCGAGTCGCAATAAGCGGCCAGCGGACAAATCTTCCTTCAGGCTTCCTTTTAGGAAACGCCCGATTCCTGTCGAGCCGGAGACCCAAAGGCAGTCACCGGCTCCACCAGAAAGTGGAGACCGGTTTTCTCCTGCGGTAGATACGGACTTCACATCACGAGAGAGTTTAGACGGTCGTTTGGGAAGAGCCACGAATGAAAGCAGGGTCGGCACAGCACCAGTGACTCCCAGGCGTGTTGAAGAGGCAGGACAGAGTCCAGATGGGTATCCCATCTGCTTTTTGCCCTCGTTTGACTACGGTCCATACCCAGTGTACCGTTTGCCCCCTGTCGCAGAGCTGAACCACCATCTGGTCCACCAAACCGAAACCCTGCTGACTGGTATCGCTCTGGCTACACATCAAGATGAAGATGGAGACACAGCTCTCCATATAGCTGTGGTGCAGGGGGAGTTGGCCATCGTCTGCAGACTGATTCAACTCCTGCTGTGGGCTCGCAGAGGCCTTGATGTCTACAACAACCTTCGTCAGACCCCTCTTCATCTGGCAGTGATCACCCAGCAGGCAAACATGGTGGAGGCTTTGTTGAGAGACGGGGCCGACCCTGCTGCCTTGGACCGTAACGGCCAAACAGCGCTCCACCTCTGCTGTGAATATTACCAGCGTGACTGTCTGTCTATTGTGCTTTCTCGCTCCTCATCCTCCATATGCCTGGAGATCAGAAACTATGAGGGTTTGAGCCCTCTCCATCTGGCGGTGCTGCGTGGCCATAAAGATTTGGCCAAAATGCTGCTGGATGCAGGCGCTGACATCAATGCTATGGACATTAAAAGTGGCCAGAGTCCACTCATGCACGCTGTGGAGAGCAATAACGCAGACATGGTCCACTTCCTCATTGAGAGTGGCTGTGATGTTAACAGCCAGTCATACAGTGGGAACACAGCCCTGCACAGCGCCTGTGGTCGAGGTCAGGTGGACACGGTGCGGCTGCTGCTAAAGAGCGGAGCTGACAGCAGCCTCAAGAACTACCATAACGATACCCCTGTGATGGTGGCCAAGAACAAGAAAATAGCAGATGTGTTGCGAGGGAGAGGCTCCAACCACATAAGAGTCCAAGATCAacactgtgtgtctctctcaccCCATGGGAGCAACTTAACAGAAAATGGGTCCCCATCTCCCAGCCACAGTCATGGATGTTCACCTTCGACTACACCACACACCCCTCATCGTAGCACCTCTCACTCTCCAAAGACTCCATCTACCCTTGTATTTCCATTTTACTAGCTCTAAATTATTGTCGAGTGCAACTTGCAACTACCTCCACACAGCCAACcaataaagagacttcagtgcCCATAAGGACATCCAGGAGAAGGTTCAGCCAATGGGATGAAGGAACAGTAAAAGACTCCACCTGAATTTAGACTTCCCTACAACCTGGCCTTCTTTTGCTGGACTCCATGACAAAAAACAGTCAAAGTTGGCATCCTTACTTGGGTTTTGATGCCTGGACAGAGTGCCTGCAGCGTCTTTGCTCATCCAGCTACTGTTGTGGTCAACCTCCTAAGGACCAAACTGGCGACTGACAAGCTGCTGCAGTGATCAGCTGGATTTCTTTACATGCATCTATGCAGCAATAGAAATGTGCCACTGCATGCAATCAAGGCTGAATGCAAAAGGACTGTTTGTAGACTGCCTGGAGATGTCAGTAAATTATGGACATAGGCCtgcctcgtttttttttttttttttgatagatAACTAGAGAGAGATGGCAGGAAATGAAGGGCAACAAACATTTTTACACCCTAACTGTTTCCAGTCTGCTTACTGTAAGGCTTGACCTGCTTAATATTGCACAGTTAAATTCCTTCTTTCTGCCATTTTAATAATCTATGTACACAGTATCTttcagatgtttgtgtgtgtgtgcataggcctgtgtgactgtgtgtgtgtgtatgtgtgtgtgtgtgtgcgcgcgcgtgcttgtgtttgtgtgttgttttatcACTGTCCAAagttgtgtatatatttttttatataaaatgtgtTCTACAGATTCACTTTTGTCTTGATTTTGTCAGCTTGTCCCacaacaacacattttaaaagcagtgttgtgattggtcagtgGGAGGTCCTTTGGAACAAAAccagccccccccaaaaaaagatatTAAATATTGTAGGGCCCTTTTGTTTATGTAAAGTGAGGCTGCTTTAAAATTAACC

Function

symbol description
bcl3 Acts upstream of or within response to steroid hormone. Is expressed in ovary. Orthologous to human BCL3 (BCL3 transcription coactivator).

NR:

description
B-cell lymphoma 3 protein homolog

GO: NA

KEGG:

id description
K09258 BCL3; B-cell CLL/lymphoma protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806603.1 True 2800 mRNA 0.50 9 25400240 25422572

Neighbor

gene id symbol gene type direction distance location
LOC120561673 LOC108235490,LOC102233864,LOC107379681 coding upstream 29184 25368329 ~ 25371056 (+)
LOC120561675 trypsase,LOC103389000 coding upstream 37927 25360758 ~ 25362313 (+)
LOC120561668 LOC105939654 coding upstream 42381 25348120 ~ 25357859 (+)
tmem145 tmem145 coding upstream 55548 25294256 ~ 25344692 (+)
lipeb lipe coding upstream 106970 25262018 ~ 25293270 (+)
ddx61 LOC104962676,LOC102800138,LOC100698984,LOC101488107,LOC104927343 coding downstream 278 25422850 ~ 25436271 (+)
tomm40 tomm40,LOC106917673,LOC103139243,LOC107083531 coding downstream 14266 25436838 ~ 25443829 (+)
LOC120562741 NA coding downstream 56689 25479261 ~ 25480707 (+)
apoeb NA coding downstream 62987 25485559 ~ 25487892 (+)
apoc4 NA coding downstream 73146 25495718 ~ 25496646 (+)
G75977 NA non-coding upstream 53024 25346263 ~ 25347216 (+)
LOC120561670 NA non-coding upstream 64282 25335016 ~ 25335958 (+)
G75943 NA non-coding upstream 255436 25144579 ~ 25144804 (+)
G75942 NA non-coding upstream 255966 25144058 ~ 25144274 (+)
G75941 NA non-coding upstream 284483 25115556 ~ 25115757 (+)
G76055 NA non-coding downstream 119827 25542399 ~ 25596454 (+)
G76083 rps19,LOC106942871,LOC103477840,LOC102304814,LOC102192408 non-coding downstream 183578 25606150 ~ 25617478 (+)
G76089 NA non-coding downstream 201858 25624430 ~ 25701085 (+)
G76109 NA non-coding downstream 379940 25802512 ~ 25804190 (+)
G76113 LOC101165095,LOC108235336 non-coding downstream 399041 25821613 ~ 25822239 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other upstream 19442 25374207 ~ 25380798 (+)
LOC120561858 NA other upstream 403931 24915254 ~ 24996309 (+)
grik5 grik5 other upstream 514867 24806289 ~ 24885373 (+)
dedd1 dedd2 other upstream 865964 24520735 ~ 24534276 (+)
G75644 NA other upstream 963421 24435139 ~ 24436819 (+)
apoc1 NA other downstream 69212 25491784 ~ 25493262 (+)
apoc2 NA other downstream 80028 25502600 ~ 25504052 (+)
taf12 taf12 other downstream 370246 25792818 ~ 25795519 (+)
G76192 NA other downstream 717329 26139901 ~ 26142627 (+)
LOC120562432 LOC101064911,LOC106524684,LOC104919574,LOC106098620,LOC102206486,LOC108235477,LOC102229209,LOC108166993 other downstream 1222812 26645384 ~ 26647615 (+)

Expression


Co-expression Network