vsig10l


Basic Information

Item Value
gene id vsig10l
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 28274073 ~ 28279197 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806615.1
CGCCCTGCTGACAGGTCTCGCTCGAGAGCCCACAGGAGGACTGCTGGCCAAGACCCCAGGTTTCTTCGCGTGTGTTTTTATATGCTTggattttaaagaaagaaagaaaaaatgttcTCGGAACGTCCTGTTTTACTAAAAATGACGTGGCCGAGTGATTTTGGGAGATTAAGCCCGGGTTTTCTGACCATTTTACTTAGCTTTACTTTTCAAGGTGCATACTGTGGACTGGTGGTTTCTCCTGTTGGTCCTACGCTGGTGAATGTTATAACTGGCAGCAATGTGACTCTGGCCGTGTCCTTCAGTGGTGCCCCTGACCCTACGGTTACCTGGTTCATTAAGGATTTTAGCCTACCTGTCGTCACATGGGCTATTAACTCCAATACTCTCCCAGACATAGACGAAAACAGAAGAAAGGTGCTGAGGATTGAGCCAAATGGATCCCTTACCTTTGTAAATGTGCCACTTGAGTATACCAGTAACTACACCGTTGAAATGACTAAATCTGGACTGGGAAGATCCTCGACTACTTTCTCTCTGGAAGTATTTAGTAGTCCAGTGCAGTTCCTGCCAGCTGTGGGAACCAGAGTTGACTCTGAAGGCAAAATAGTGGTCGCTATCCAATGTGTCAGTGAGGCCTGGCCTAAGGCTGTGGTGTCATGGTCCAAAGGCAGCGAGGCTCTCACCAACGGGACACCATACCAGATCAGCAGTGACACCACACAGCTGGAGATTCTGGGTTACAATGTCAGCAAATTTCTCCTCCAAAACTACTTTTGTAACTGCAGCAACCCACTGGGCAGCCAGACGAGGGAAATTGTGTTAACAGGACCATCGATCTCAAATTCCAGTTTGTTATCTAGTCACAATGGAACCATCGTCACATTGACCTGGGAGGTCCCGCCTACCTCTGTTGTTACAGGGTTTGACATCCAAATGAAAGGACCAGACCTCCTGGGAAAAAATCACACCCAAACTAGCTTAGACCAATTCTACACCATCCAGCATGAACCTGGCACTAACAGGAGTGCAGACATCTTTATCCTCGATCCCAACTTGACGTACATGTTTCGGATTATCCCCAAAGCTCTTATGACAGAAGGAGACCCATCTGCGGTCCACAGAATTGGTCCAGGTGAAGGGCTGAGTAGATCTGCCATCACTGGCATTGCAGCTGGAATCCCTTGCGGCATTCTCTTCCTACTCCTGCTGGGCGGCTTCATCTACTGTGTCTACTGGAACAAGAACAAAAGTCGGCAAACAAGATATCCGTTGTCCAGAGCAGTTGAGAAGGCAGTAACATCTCAAACAGAAACAACTCCTCATAACCTGCTGACAGGAGGGCTGAAGTCTCCCCCTGATTACAACAGATTGCAGCAGACTCCCTCTGAAAGATCAGTGGCTCTTCCAACATTTGGCAGTCCTCTGCCTGTCAGAGTTGCTACAACTGTCTAAACTCCcaaatttgcttttgtttttgtaaagcaTGCTATATATTTGTTTGATTTTAATGTATGATATTGTTCTATATTTGTATTAATATTTTAACTGAAAGTAAGAATCAGTGTTATACATTTTTCAGCGGAGATTATATTTGTGGTATTTCTTCCACTTTCCTTTAAAATCTACAAGTTAAACTCTatcattctgtttttttgtttatttattcataataaATCAAAGTATAAGCCATGCCtgtagaatttgttttttaGCTACATATCAAGAAAAGTGTCTCCTACCAATCTGTACAAGTTCAAAACATCTCCACAACTGTAACTATACTGTTTTCCTACTGTAGGTCCCTCGCTATATTATTTGAACATAATGCTCacttggattaaaaaaaacattttgttctgCTTTATGATCAACATACTGATATTT

Function

NR:

description
V-set and immunoglobulin domain-containing protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806615.1 True 1887 mRNA 0.43 9 28274073 28279197

Neighbor

gene id symbol gene type direction distance location
etfb etfb coding upstream 1237 28262867 ~ 28272836 (+)
LOC120562747 LOC103369304,LOC107379318,LOC104956022,LOC100707205,LOC107082966 coding upstream 196810 28074190 ~ 28077263 (+)
si:dkeyp-97a10.3 NA coding upstream 214913 28047643 ~ 28059160 (+)
pnrc2 pnrc2,LOC100697533,LOC104941893,LOC101487357 coding upstream 918240 27351851 ~ 27355833 (+)
LOC120561567 mycbp coding upstream 969067 27303310 ~ 27305006 (+)
LOC120562954 LOC103375369 coding downstream 68413 28347610 ~ 28354162 (+)
xrcc1 xrcc1,LOC102793167 coding downstream 75227 28354424 ~ 28379143 (+)
LOC120561728 LOC104950326 coding downstream 140644 28419841 ~ 28431428 (+)
ethe1 ethe1,LOC102793944 coding downstream 153125 28432322 ~ 28436934 (+)
phldb3 phldb3 coding downstream 161954 28441151 ~ 28471080 (+)
G76579 NA non-coding upstream 37734 28233612 ~ 28236339 (+)
G76510 NA non-coding upstream 335411 27934795 ~ 27938662 (+)
G76503 NA non-coding upstream 410338 27863449 ~ 27863735 (+)
G76470 LOC104924712,LOC103367060 non-coding upstream 464031 27809798 ~ 27810042 (+)
G76468 LOC103367060,LOC103388013 non-coding upstream 468238 27805618 ~ 27805835 (+)
G76608 NA non-coding downstream 12803 28292000 ~ 28292560 (+)
LOC120562953 NA non-coding downstream 52722 28331919 ~ 28346792 (+)
LOC120563095 NA non-coding downstream 158018 28437215 ~ 28438360 (+)
G76705 NA non-coding downstream 254846 28534043 ~ 28534766 (+)
G76709 NA non-coding downstream 263401 28542598 ~ 28542841 (+)
G76581 LOC101157563,LOC103369309 other upstream 28912 28241783 ~ 28245161 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other upstream 246547 27984053 ~ 28027526 (+)
ago1 ago1,LOC102230823,LOC103367053,LOC107379324,LOC103388087,LOC107082980,LOC101466039,LOC104959479 other upstream 290359 27962690 ~ 27983714 (+)
G76511 NA other upstream 321493 27948883 ~ 27952580 (+)
fam110d LOC104924711,LOC103367059 other upstream 388609 27867444 ~ 27885464 (+)
lim2.5 lim2,LOC106582670,LOC106605161,LOC107379310,LOC100699404,LOC102215845,LOC103139272 other downstream 4079 28283276 ~ 28287777 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other downstream 108900 28388097 ~ 28415653 (+)
LOC120562434 NA other downstream 135321 28414518 ~ 28416755 (+)
G76707 NA other downstream 241502 28520699 ~ 28521622 (+)
G76714 NA other downstream 274375 28553572 ~ 28569866 (+)

Expression


Co-expression Network