etfb (etfb)


Basic Information

Item Value
gene id etfb
gene name etfb
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 28262867 ~ 28272836 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806634.1
CACCCTAAAATAAGTCCGACCTCTCCTCCTTGGGTGAAGGTTCATTGCGGTCGTTAGCTGTCTACTACTGCATAGTTAAACATTTCAGCAAAAATGTCTGGCCGTGTCCTCGTCGGAGTTAAGCGTGTCATTGACTACGCTGTTAAGATCCGGGTAAAGCCGGACAACAGTAGCGTGGTGACAGATGGTGTTAAGCACTCAATGAACCCCTTCTGTGAGATCGCTGTGGAGGAGGCGGTCAAGATGAAGGAGAAGAAGCTCATTAAGGAGGTGGTGGCTGTCAGCTGCGGTCCACAGCAAGCACAGGAGACCATCCGTACTGCCCTTGCCATGGGAGCAGACCGTGGCATTCATGTGGAAGTGACTGGGAAAGACTATGAAACCTTGGGACCCCTGCAGATCTCCAAGATCATGGCTGCTTTGGCCAAGAAGGAGGAAGCTCAACTCATCATCCTTGGcaaacagGCAATCGATGATGACTGCAATCAGACTGGCCAGATGACAGCAGCCTTACTGGACTGGCCTCAGGGTACATTTGCATCAGAGGTGTCGTTGGAAGGAGACAAGATTAAAGTGGTGAGAGAAGTTGATGGGGGCCTGGAAACTATTAAGATCAACGTACCAGCAGTGATTACCGCTGACCTTCGACTCAACACCCCCAGATATGCCACCCTGCCTAACATCATGAAagccaagaagaagaagatagcCAACATGAAGCCAGCAGACTTGGGGGTGGACATCACATCCCGGTTGGAGGTGTTGAGAGTGGATGAGCCGCCACAGAGACAGGCGGGAGTGAAGGTGGAGACGGTGGAAGACCTGGTTAGCAAACTGAAGGAGGCAGGCTTGGTATAGAGGCTTTAGGAGCATGAGCACGGAGCACGGAACTTGGCAGAAGGGACTCTCTAATGAATAACTGGACTGTGTTGCATAAGCATACCCGGAGGACTGTCTTATGTATCGGTCTAATCCCTCTGTTTGAGGCCGGGACTCCTGAGGATATGCAGAGTACTGACAGGAGGGGAGGAGTACTGAGAAACACTGTCCTGCAGCAGCCCCAGACAACCCCAAAAGGATCATCTTGTCTTTTATGTGAATTTTAAACTTGCATTCATCTGTATCATAAGCTACTTATCTGACTTTAGACAAGAAGTCTTTATGCAATAATTGAAACCCAGAAACATCTATCACTATCATTCATGCTGCTGTTTGTATTACACTGTACACTACCAGTACGATGCATTTCACCAACAGGTACTTGGCTGTTTAATCTTGTGTATCTGTAGTCACACATGTTGAGAGGTGCCCTTTTTGTAAATGATATATGTAAATATGGACCCAAACATTGGTGAGATGATAACGTCCTTCAagattagtgtcgtgtctactGGTAATTTGTGTAGTTTGTGTAATTGTAACTGGGTTTCAGGACTGCGTCGACGGTGTCTCTCAGTATGAGCAGGGGAAGATGATCATGAATCCGACTTTCACCGTAAGCGCCTCAATTCTCCGTTGATTGTGCCGAACATTAACATGACAATAAAGCAGCCAGTCTTTTTCATATCAAAATA

Function

symbol description
etfb Predicted to enable electron transfer activity. Predicted to be located in mitochondrial matrix. Human ortholog(s) of this gene implicated in multiple acyl-CoA dehydrogenase deficiency. Orthologous to human ETFB (electron transfer flavoprotein subunit beta).

NR:

description
electron transfer flavoprotein subunit beta-like isoform X1

GO:

id name namespace
GO:0009055 electron transfer activity molecular_function

KEGG:

id description
K03521 fixA, etfB; electron transfer flavoprotein beta subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806634.1 True 1574 mRNA 0.47 7 28262867 28272836

Neighbor

gene id symbol gene type direction distance location
LOC120562747 LOC103369304,LOC107379318,LOC104956022,LOC100707205,LOC107082966 coding upstream 185604 28074190 ~ 28077263 (+)
si:dkeyp-97a10.3 NA coding upstream 203707 28047643 ~ 28059160 (+)
pnrc2 pnrc2,LOC100697533,LOC104941893,LOC101487357 coding upstream 907034 27351851 ~ 27355833 (+)
LOC120561567 mycbp coding upstream 957861 27303310 ~ 27305006 (+)
utp11 utp11 coding upstream 1247765 27013093 ~ 27015102 (+)
vsig10l NA coding downstream 1237 28274073 ~ 28279197 (+)
LOC120562954 LOC103375369 coding downstream 74774 28347610 ~ 28354162 (+)
xrcc1 xrcc1,LOC102793167 coding downstream 81588 28354424 ~ 28379143 (+)
LOC120561728 LOC104950326 coding downstream 147005 28419841 ~ 28431428 (+)
ethe1 ethe1,LOC102793944 coding downstream 159486 28432322 ~ 28436934 (+)
G76579 NA non-coding upstream 26528 28233612 ~ 28236339 (+)
G76510 NA non-coding upstream 324205 27934795 ~ 27938662 (+)
G76503 NA non-coding upstream 399132 27863449 ~ 27863735 (+)
G76470 LOC104924712,LOC103367060 non-coding upstream 452825 27809798 ~ 27810042 (+)
G76468 LOC103367060,LOC103388013 non-coding upstream 457032 27805618 ~ 27805835 (+)
G76608 NA non-coding downstream 19164 28292000 ~ 28292560 (+)
LOC120562953 NA non-coding downstream 59083 28331919 ~ 28346792 (+)
LOC120563095 NA non-coding downstream 164379 28437215 ~ 28438360 (+)
G76705 NA non-coding downstream 261207 28534043 ~ 28534766 (+)
G76709 NA non-coding downstream 269762 28542598 ~ 28542841 (+)
G76581 LOC101157563,LOC103369309 other upstream 17706 28241783 ~ 28245161 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other upstream 235341 27984053 ~ 28027526 (+)
ago1 ago1,LOC102230823,LOC103367053,LOC107379324,LOC103388087,LOC107082980,LOC101466039,LOC104959479 other upstream 279153 27962690 ~ 27983714 (+)
G76511 NA other upstream 310287 27948883 ~ 27952580 (+)
fam110d LOC104924711,LOC103367059 other upstream 377403 27867444 ~ 27885464 (+)
lim2.5 lim2,LOC106582670,LOC106605161,LOC107379310,LOC100699404,LOC102215845,LOC103139272 other downstream 10440 28283276 ~ 28287777 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other downstream 115261 28388097 ~ 28415653 (+)
LOC120562434 NA other downstream 141682 28414518 ~ 28416755 (+)
G76707 NA other downstream 247863 28520699 ~ 28521622 (+)
G76714 NA other downstream 280736 28553572 ~ 28569866 (+)

Expression


Co-expression Network