LOC120562760 (LOC103358480)


Basic Information

Item Value
gene id LOC120562760
gene name LOC103358480
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42907016 ~ 42912785 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806646.1
TTGAAGGCTGGGACAAAGGCAGCAGACGTCAACCCAACTCAGCTCACAGAGAGGAGGGCTATATACACTTACAAGGTGAGGATGACATCCATGGCAGATCGACTGGCCCGTCAGCAGGGCAGGGAACAAGGCATTGGCACAAACGAGAAAACAGTGAAGTTCTCCCAGCAGGATTATGAGACTCTGCGCAAGCAGTGTTTGAAGAGTGGATGCCTGTTTGAGGACAACTGCTTTCCAGCTGAGCCCACATCACTGGGCTACAATGAGCTGGGACCAGACTCATCCAAAACCAAGGGGGTTGTTTGGAAAAGGCCAAAGGAGCTGTGCTCAAACCCAAAGTTCATTGTTGATGGAGCCACAAGGATGGACATTTGCCAAGGAGCTCTGGGTGACTGCTGGCTTCTGGCTGCAATAGCCAGTCTGACTCTAGACCAGCAGATCCTGGCTCGTGTAGTGCCCCAGGAACAGAGTTTTACTGAAGGTTACGCCGGGATATTTCACTTCCAGTTCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCCACAAGAAATGGAAAGCTGCTGTTCGTTCACTCAGAAAAGCGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCCTACGCCAAGTTGTATGGCAGCTATGAGGCCCTGTCAAGTGGAAATGCAATTGAGGGCTTTGAGGATTTCACAGGAGGGATTGCAGAAGTATACACTTTAGACAAAGCTCCACTGACGCTCTTCCAAATCATGCAGAAGGCCCTGAGCCTGGGTTCACTGCTTGGTTGCTCTATTAATAAAACCAGTGCCGAGGCAGAGGCAGTTACAGCTCTCAAACTTGTCATAGGACATGCATACTCAGTCACTGGTGCAGAGGAGGTTCATTTCCAAGGTAAGCTGGTTCAGCTGGTTCGCATCAGGAACCCATGGGGTCAGGTGGAGTGGACTGGGCCTTGGAGTGATGGGTCCAGTGAATGGAACAATATCAGCAAAGATGAGAAATTGAAGTTGAACCATGTGGCTGTTGATGGTGAATTCTGGATGTCCTATTCAGACTTCATCAAGCAGTTCTCCAGGCTGGAGATCTGTAACTTGACCCCAGACACGCTCATGAGTGATAAAGTGGGCCGCTGGAAGCACTACCAGTATGAAGGGATGTGGAGGAAGGGATCTACTGCAGGCGGCTGCCAGAATTTCTCAGACACATTCTCGTCCAACCCTCAGTTTGTGGTGCGCCTGGAGGATTTGGATGATGATCCCCTGGATGGGAAGGATGGATGTACCTTTCTGGTTGGGCTCATGCAAAAGGATGGACGACAGCAGAAGAGGCTCGGTCGCAACCTTGAGAGCATTGGCTTTGCCATTTATAAGGTCCCAGATCAGTACAAAGGCCAACGCAATGTTCACCTAGGTCCAGATGTCCTGCTGCGACAGAGAGCTGTGGCCACGAGCAGCTGCTTCGTCCCCACACGGGAAGTGTGCAACCGCTTTAAACTTCCTCCAGGAGAATATGCCATTGTTCCCTCAACCTTCCAGCCGAACAAGAATGGCAGCTTCCTTCTCAGGGTGTTCTCTGAGAAACATGCTGCAGCCAGtccacTGGAGCCGCACATTGACATTCAAATAGAGGAGCAGGAGCTATCTGAGAGTGATGTGGATCCTCATTTCAAGGAGCTCTTCAAGCTGAGTGCTGGCAATGGCATGGAGGTATCAGCCTTTGAACTGGTTGAAATTTTGAACAAAGTTGTCTCTCACCGGTCTGATATCAAGACAGATGGCTTCAGCATTGAGACAGGTCGCCTTATTGTCAGTCTGCTGGATAAAGATGAAAGTGGCAAATTGGGGCTGATGGAATTCCACTTGCTTTGGAGCAAAATCCAGAAATACCTGGCGATCTTCAAGAAATATGACACAGACAGCTCTGGCACCATGAACTCCCACGAGATGAGAGGCGCCGCCACTGAAGCAGGTTTCCAGGTCAACAATGCTGTGCTGCAGTCCATTGTCAGCCGTTATTCCGATGCTCAGTATGTCATAGATTTTGACAGTTTTGTGGGTTGTCTCATTAAACTGGAAATGCTCTTCAAAATGTTTAAGGCTCTGGAGAGAGCTCACAAAGGGAAGATTGAGCTGGATATGCAACAGTGGCTGTGCCTGGCGATCTACTGACTCTGGAGACAAGACAAGCTAGGGCCCTTTTGTGATACCTGCTGGAGGATTAACAATACATTTATtgaattcacaaagaaaatctattttttataAACTAAGTAAACCCAATGACAGTTAACATGCACTCCATAAGTTCCAAATGCTTGAAAATGGCTAAAACGTGTTTGTTAATTTTAATCATATTTGCTGAACATGTACAGTACGGGCCAagagtttggacacaccttctcattcaatgtgtttcctttttatttt
>XM_039806647.1
TATTGAAGGCTGGGACAAAGGCAGCAGACGTCAACCCAACTCAGCTCACAGAGAGGAGGGCTATATACACTTACAAGGTGAGGATGACATCCATGGCAGATCGACTGGCCCGTCAGCAGGGCAGGGAACAAGGCATTGGCACAAACGAGAAAACAGTGAAGTTCTCCCAGCAGGATTATGAGACTCTGCGCAAGCAGTGTTTGAAGAGTGGATGCCTGTTTGAGGACAACTGCTTTCCAGCTGAGCCCACATCACTGGGCTACAATGAGCTGGGACCAGACTCATCCAAAACCAAGGGGGTTGTTTGGAAAAGGCCAAAGGAGCTGTGCTCAAACCCAAAGTTCATTGTTGATGGAGCCACAAGGATGGACATTTGCCAAGGAGCTCTGGGTGACTGCTGGCTTCTGGCTGCAATAGCCAGTCTGACTCTAGACCAGCAGATCCTGGCTCGTGTAGTGCCCCAGGAACAGAGTTTTACTGAAGGTTACGCCGGGATATTTCACTTCCAGTTCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCCACAAGAAATGGAAAGCTGCTGTTCGTTCACTCAGAAAAGCGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCCTACGCCAAGTTGTATGGCAGCTATGAGGCCCTGTCAAGTGGAAATGCAATTGAGGGCTTTGAGGATTTCACAGGAGGGATTGCAGAAGTATACACTTTAGACAAAGCTCCACTGACGCTCTTCCAAATCATGCAGAAGGCCCTGAGCCTGGGTTCACTGCTTGGTTGCTCTATTAATAAAAAGACCAGTGCCGAGGCAGAGGCAGTTACAGCTCTCAAACTTGTCATAGGACATGCATACTCAGTCACTGGTGCAGAGGAGGTTCATTTCCAAGGTAAGCTGGTTCAGCTGGTTCGCATCAGGAACCCATGGGGTCAGGTGGAGTGGACTGGGCCTTGGAGTGATGGGTCCAGTGAATGGAACAATATCAGCAAAGATGAGAAATTGAAGTTGAACCATGTGGCTGTTGATGGTGAATTCTGGATGTCCTATTCAGACTTCATCAAGCAGTTCTCCAGGCTGGAGATCTGTAACTTGACCCCAGACACGCTCATGAGTGATAAAGTGGGCCGCTGGAAGCACTACCAGTATGAAGGGATGTGGAGGAAGGGATCTACTGCAGGCGGCTGCCAGAATTTCTCAGACACATTCTCGTCCAACCCTCAGTTTGTGGTGCGCCTGGAGGATTTGGATGATGATCCCCTGGATGGGAAGGATGGATGTACCTTTCTGGTTGGGCTCATGCAAAAGGATGGACGACAGCAGAAGAGGCTCGGTCGCAACCTTGAGAGCATTGGCTTTGCCATTTATAAGGTCCCAGATCAGTACAAAGGCCAACGCAATGTTCACCTAGGTCCAGATGTCCTGCTGCGACAGAGAGCTGTGGCCACGAGCAGCTGCTTCGTCCCCACACGGGAAGTGTGCAACCGCTTTAAACTTCCTCCAGGAGAATATGCCATTGTTCCCTCAACCTTCCAGCCGAACAAGAATGGCAGCTTCCTTCTCAGGGTGTTCTCTGAGAAACATGCTGCAGCCAGtccacTGGAGCCGCACATTGACATTCAAATAGAGGAGCAGGAGCTATCTGAGAGTGATGTGGATCCTCATTTCAAGGAGCTCTTCAAGCTGAGTGCTGGCAATGGCATGGAGGTATCAGCCTTTGAACTGGTTGAAATTTTGAACAAAGTTGTCTCTCACCGGTCTGATATCAAGACAGATGGCTTCAGCATTGAGACAGGTCGCCTTATTGTCAGTCTGCTGGATAAAGATGAAAGTGGCAAATTGGGGCTGATGGAATTCCACTTGCTTTGGAGCAAAATCCAGAAATACCTGGCGATCTTCAAGAAATATGACACAGACAGCTCTGGCACCATGAACTCCCACGAGATGAGAGGCGCCGCCACTGAAGCAGGTTTCCAGGTCAACAATGCTGTGCTGCAGTCCATTGTCAGCCGTTATTCCGATGCTCAGTATGTCATAGATTTTGACAGTTTTGTGGGTTGTCTCATTAAACTGGAAATGCTCTTCAAAATGTTTAAGGCTCTGGAGAGAGCTCACAAAGGGAAGATTGAGCTGGATATGCAACAGTGGCTGTGCCTGGCGATCTACTGACTCTGGAGACAAGACAAGCTAGGGCCCTTTTGTGATACCTGCTGGAGGATTAACAATACATTTATtgaattcacaaagaaaatctattttttataAACTAAGTAAACCCAATGACAGTTAACATGCACTCCATAAGTTCCAAATGCTTGAAAATGGCTAAAACGTGTTTGTTAATTTTAATCATATTTGCTGAACATGTACAGTACGGGCCAagagtttggacacaccttctcattcaatgtgtttcctttttatttt

Function

NR:

description
PREDICTED: calpain-2 catalytic subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806646.1 False 2439 mRNA 0.48 21 42907018 42912785
XM_039806647.1 True 2444 mRNA 0.48 21 42907016 42912785

Neighbor

gene id symbol gene type direction distance location
LOC120562763 LOC106675675,LOC106675676 coding upstream 75357 42825598 ~ 42831659 (+)
LOC120562761 LOC104963449 coding upstream 106420 42787709 ~ 42800596 (+)
LOC120562762 LOC104963449 coding upstream 138352 42764403 ~ 42768664 (+)
LOC120562768 NA coding upstream 241013 42663518 ~ 42666003 (+)
LOC120562755 NA coding upstream 377534 42527496 ~ 42529482 (+)
LOC120562779 NA non-coding upstream 18575 42887095 ~ 42888441 (+)
G80737 NA non-coding upstream 30284 42875786 ~ 42876732 (+)
LOC120562773 NA non-coding upstream 43914 42856437 ~ 42863102 (+)
LOC120562781 NA non-coding upstream 61082 42842575 ~ 42845934 (+)
LOC120562780 NA non-coding upstream 126493 42778955 ~ 42780523 (+)
G80741 LOC105920527,LOC107095263,LOC103369598,LOC106535878 non-coding downstream 35073 42947858 ~ 42951947 (+)
G80749 NA non-coding downstream 80697 42993482 ~ 43067664 (+)
LOC120562776 NA non-coding downstream 83363 42996148 ~ 42997128 (+)
G80751 NA non-coding downstream 85244 42998029 ~ 43021744 (+)
LOC120562772 NA other upstream 120611 42783495 ~ 42786405 (+)
LOC120562767 NA other upstream 263026 42632407 ~ 42643990 (+)
LOC120562757 LOC104947480 other upstream 367415 42532924 ~ 42539601 (+)
G80682 NA other upstream 421007 42485335 ~ 42486009 (+)
G80410 NA other upstream 900422 41939498 ~ 42006594 (+)

Expression


Co-expression Network