LOC120562762 (LOC104963449)


Basic Information

Item Value
gene id LOC120562762
gene name LOC104963449
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42764403 ~ 42768664 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806651.1
CTGGGACCCCCCCACCTTTGTCAGCTATATAGGAGGCTGGGACAAAGGCAGCAGACGTCAACCTAACTCAGCTCACAGAGAGGAGGGCTATATACACTTCCAAGGTGAGGATGACATCCACGGCAGATCGACTGGCCCGTCAGCAGGACAGGGAAAAAGGCATTGGCACAAACAAGAAAGCAGTGAAGTTCTCCCAGCAGGATTATGAGACTCTGCGCCAGCAGTGTTTGAAGAGTGGACGCCTGTTTGAGGACAACTGCTTTTCAGCTGAGCCCACATCACTGGGCTACAAGGAGCTGGGACCAGATTCATCCAAAACCAAGGGGGTTGTTTGGAAAAGGCCAAAGGAGCTGTGCTCAAACCCAAAGTTCATTGTTGATGGAGCCACAAGGACGGACATTTGCCAAGGATCTCTGGGTGACTGCTGGCTTATGGCTGCAATAGCCAGTCTGACTCTAGACCAGCAGATCCTGGCTCGTGTAGTGCCCCAGGAACAAAGTTTTACTGAAGGTTACGCCGGGATATTTCACTTCCAGATCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCAACAAGAAATGGAAAGCTGCTGTTTGTTCACTCAGCGGTGGGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCctacgccaaGTTGTATGGCAGCTATGAGGCCCTGACAGGAGGATTACCTACTGAGGGTTTTGAGGATTTCACAGGAGGGATTGCAGAAGTATACTACTTAGACAAAGCTCCACCGACGCTCTTCCAAATCATGCAGAAGGCCATGAGCCTGGGTTCACTACTTGGTTGCTTTATTATTCAAAAGACCAGTGCCGAGACAGAGGCAGTTACACCTCTCAAACTTGTCAAGGGACATGCATACTCAGTCACTGGTGCAGAGGAGGTTCATTTCCAAGGTAAGCCGGTTCAGCTGGTTCGCATCAGGAACCCATGGGGTCAGGTGGAGTGGACTGGGCCTTGGAGTGATGGGTCCATTGAATGGAACCATATCAGCAAAGATGAGAAATCAAAGTTGAACCATGTGGCTGTTGATGGTGAATTCTGGATGTCCTATTCAGACTTTATCAAGCAGTTCCTCAGGCTGGAGATCTGTAACTTGACCCCAGACGCGCTCACGTGTGATAAAGTGGGCCACTGGAACCACTACCAGTATGAAGGGATGTGGAGGAAGGGATCTACTGCAGGCGGCTGCCGCAATTTCTCAGCCACATTCTCGTCCAACCCTCAGTTTGTGGTGTGCCTGGAGGATGTGGATGATGATCCCCTGGATGGGAAGGATGGATGTACCTTTCTGGTTGGGCTCATGCAAAAGGATGGGCGACAGCAGAAGAAGCTCGGCCGCAACCTTGAGAGCATTGGCTTTGCCATTTATAAGGTCCCAGATCAGTACAAAGGCCAAAGCAATCTTCACCTGGGTCCAGATGTCCTGCTGCGACAGAGACCTGTGGCCACGAGCTCCTTCGTCCCTACACGGGAAGTGTGCAACCGCTTTAAACTTCCTCCAGGAGAATATGCCATTGTTCCCTCGACCTATGAGCCTGACAAGAATGGCAGCTTCCTGCTCAGGGTGTTCTCTGAGAAACCGGCTGCAGCCAGAAATGTTTAGGGCTCTGGAGAGAGCTGACACAGGGGAGATTGAGCTGGATATGCAACAGTGGCTGTGCCTGGTGGTCCTCTGACTCTGGAGACAAGACAACCGAGATGATACCTGCTGGAGGATTAACAATACATTTATTGAATTCAccaaaaaatcacatttattttttacaaactaAGTATACTCAATGACAGTTCACATGCATTCTATAAGTTCCAAATGCTTGAACATggctaaaatgtgtttgttaaTTTGAATCATATTTGCTGAACATAAACATGGGGACATGTTGTATCAGTCACATGTATTATTccatttttaaatcttttttgtgTGCAGCGGGAACAATTCTGTCTTGTTAGTTGGTGTTTTTGCTCTTTTAGGTGTTGCAAAACTTCTGTGAAAtgcaagaaaataaagaaactaaCAAACTA

Function

NR:

description
PREDICTED: calpain-2 catalytic subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806651.1 True 2071 mRNA 0.48 14 42764403 42768664

Neighbor

gene id symbol gene type direction distance location
LOC120562768 NA coding upstream 98400 42663518 ~ 42666003 (+)
LOC120562755 NA coding upstream 234921 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 913701 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 1187900 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 1218809 41541090 ~ 41545594 (+)
LOC120562761 LOC104963449 coding downstream 19045 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 56934 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 138352 42907016 ~ 42912785 (+)
G80719 NA non-coding upstream 5777 42740826 ~ 42758626 (+)
G80717 NA non-coding upstream 20750 42696625 ~ 42743653 (+)
LOC120562769 NA non-coding upstream 43549 42719416 ~ 42720854 (+)
G80714 NA non-coding upstream 86539 42677376 ~ 42677864 (+)
G80711 NA non-coding upstream 141798 42617660 ~ 42622605 (+)
LOC120562780 NA non-coding downstream 10291 42778955 ~ 42780523 (+)
LOC120562781 NA non-coding downstream 73911 42842575 ~ 42845934 (+)
G80732 NA non-coding downstream 81933 42850597 ~ 42955526 (+)
LOC120562773 NA non-coding downstream 87773 42856437 ~ 42863102 (+)
G80737 NA non-coding downstream 107122 42875786 ~ 42876732 (+)
LOC120562767 NA other upstream 120413 42632407 ~ 42643990 (+)
LOC120562757 LOC104947480 other upstream 224802 42532924 ~ 42539601 (+)
G80682 NA other upstream 278394 42485335 ~ 42486009 (+)
G80410 NA other upstream 757809 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 1071398 41682413 ~ 41693005 (+)
LOC120562772 NA other downstream 14831 42783495 ~ 42786405 (+)

Expression


Co-expression Network