LOC120562768



Basic Information


Item Value
gene id LOC120562768
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42663518 ~ 42666003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039806659.1
AGTTCTCAGacttttctatttctctctctctcctgtcattcagATATACCTCCTGCTGCTGACTCTAGAcctcatctctctcctgtcattcagATCAACATGAAGATCTCTATCTTTGCCGGtgttctgctgctctctctgtgcCAACTGTGCAGTTGTGTTGCCCCTGCTTACCATCTTAGGGGGATTGATGATAACAAGTTTGAACGAGAGCATATCGTGGCTAACCTATGCACCCAGGTGATGATTGACAGAGGATTTGATGTCCTCGACAAAACCACCTGTAAACCGGAGAAAACCTTCATCAAAGCTCCAGTGGACGAGGTCCGAGCCGTCTGTGGGGGGAAAGGAAGTGGAGTCAGCAAAGAGAACTTTAAACTGGTTGAGTGTAAAGTTGATCCTGCTCATAACAAGCCTCCCAACTGTCAGTACacggtggaggaggtggagaagaaAATCCTGGTCACCTGTGTCAAAAACCAACCTACTGAGTTTAAAATAcaagagtaatctgttactacaactgatgaatcagagtaatctgttactacctgatgaatcagagtagtctgttactacctgatgagtAACTTGTGTCTCCTGTTGAATAAAACACGTGACAGTGTAACTCTGggtctgtttttaatgttgtcAAGTTCACTCATTCATGAAGTAGATGTAGGTAAAACTACAGAtcaatataataacaataacaacaacaacttttgTAGTTTTAACTGTAAGAAACCATCTGATTCTCTGAAGACAAGAAGTCTGAAAACTGCAGacattaaacatacaatatgtaactttatgccactaggggtct

Function


GO:

id name namespace
GO:0042742 defense response to bacterium biological_process
GO:0004518 nuclease activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039806659.1 True 829 mRNA 0.42 3 42663518 42666003

Neighbor


gene id symbol gene type direction distance location
LOC120562755 NA coding upstream 134036 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 812816 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 1087015 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 1117924 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 1161859 41500185 ~ 41501659 (+)
LOC120562762 LOC104963449 coding downstream 98400 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 121706 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 159595 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 241013 42907016 ~ 42912785 (+)
G80711 NA non-coding upstream 40913 42617660 ~ 42622605 (+)
LOC120562770 NA non-coding upstream 88033 42574061 ~ 42575485 (+)
G80695 NA non-coding upstream 101896 42561316 ~ 42561622 (+)
G80473 NA non-coding upstream 184454 42362740 ~ 42479064 (+)
G80465 NA non-coding upstream 187264 42338528 ~ 42476254 (+)
G80713 NA non-coding downstream 9934 42675937 ~ 42770719 (+)
G80714 NA non-coding downstream 11373 42677376 ~ 42677864 (+)
G80717 NA non-coding downstream 30622 42696625 ~ 42743653 (+)
LOC120562769 NA non-coding downstream 53413 42719416 ~ 42720854 (+)
G80719 NA non-coding downstream 74823 42740826 ~ 42758626 (+)
LOC120562767 NA other upstream 19528 42632407 ~ 42643990 (+)
LOC120562757 LOC104947480 other upstream 123917 42532924 ~ 42539601 (+)
G80682 NA other upstream 177509 42485335 ~ 42486009 (+)
G80410 NA other upstream 656924 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 970513 41682413 ~ 41693005 (+)
LOC120562772 NA other downstream 117492 42783495 ~ 42786405 (+)

Expression



Co-expression Network