zgc:172323 (LOC104953825,LOC100700401,LOC102293068,LOC102783698,LOC101479285,LOC103354301)


Basic Information

Item Value
gene id zgc:172323
gene name LOC104953825,LOC100700401,LOC102293068,LOC102783698,LOC101479285,LOC103354301
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 2828827 ~ 2834341 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806662.1
CTCAGCATTCAATTAAAGTCCCTCATCCCATCAGAGCAGATCGCATCAGTGCTGCACCTTCTAGATGCTACCGGACTAGGCCTGCTTGCCTGTCTGCTGCCAAGTGCCGTATTGGACACTTGGACATTGAGAGGACCAGAGGAAACACCGTCGCTGCCGCCACCATGAGTCGCAGCCCAGAGAGGATCTCGTCCTACCGCCGTCACTTTGAGGACAGCAGCAGCTCGTCCTACCAGGTCAGGGTGTCCAGTCCATCCCCCACCAGGAGAGACGCCCGTCATGCCTCCGCCGGCTACTCCTGCAGAGCCGGGGCCAGCGGCATGCGTGTGGAGTCAGTGGGACGAAGGAACGTCTCAGCTGCACGCAGGACTCGCATGGTTGGAGCAGGCGTGAGTGCAGGAGCCTTGGTCTGTGTTGGGCCAAGTGGAGAACCTCCTATAGATCTGGATGTGGCTGCAGCTGAAAACCATGAATTTCTCAACACCCGCAcaacagagagacaggagaTGATCGTCCTCAATGACAGACTGGCTGTATACATTGACAAGGTTCGATCACTTGAGCAGCAGAACAAGCTATTGGAAACAGAGATCGAGGCCTACCAGAACCGCTTTGAGAATCCATCCGGTCTGCGTCTCCTGTATGAGGAACAGCTGAGGGAGCTGAAAAAGATCGCTGACCAGATGAGAGTTCAGCGGGACATTTCCTTGGCGGCTAAGGAGTCCACAGCTGCCCAACTGGAGGCAATCAAAATCAAATATGAGGAGGCAGTGGAGCTGAGGAGGAAAGCTGAGTTAGACATTGAAACCTTCCGTCCAGATGTTGACAAAGCCACCTCCTCGCGCATTGCCTTGGAGAAGAAGCTGGAGCAGCTGGAAGTTGAAATTGAATTCCTAAAACGGGTCCATCAGCAGgaAATTGACGAGCTCATGAAACAGATCTACTCGGCTCATGCGTCAGCTCAGAGTGCGTTCACCCTCCCTGACCTGGCAGCTGCTTTGAAACAAATCCAAACCCAGTATGACGACATCGCAGCCAAAAATCTCCAGGAGATGGATTCGTGGTATAAAAACAAGTTTGAAGGGTTGACCAGTAAGACGTCAAGGCATGTGGATAAGGTTCGAAGCATTAGAAATGAAATAGCCGGTGCCAAAAAGGATATCCAAGGCAAAGACCGTGAATTGGATGCCATGAGGAGCAAGAATGAAGCTCTTGAGGCCCGGATCCGAGAGACACAAGAAAATCACAAGAAGGAACTGGAAGACCTTCAGGCTCGGATTGAGGCCCTGCAGTTTGAGCTGAAATCCTACAAGGAGAAAATTGCACTGCACCTGCGTGAGTACCAGGACCTCCTGAATGTCAAGATGGCTCTGGAGATTGAAATTACAACATACAGaaaACTCATCGAAGGAGAGGACCTGCGGCTCTCTGGCATGATGCAAACCCTGTCTCTCACCAGCTGTAGTGTGAGCGCCATTGGTGCTGGGATGAGCTTCAGTGGAGGCAGCATGGGTGGTGGTGGCATGGGTGGCGGGATGATGGGAGGTAGTGGTGGAGGTGTTGGAGGCACGGGGAGTGGAGTGGGAATGGGTGGGGGCATGGGTGCAGGAGGCATAGGCACAGGTCCAGGCAGTGGTGCTGGGGGAATGGGTGGAAGAATGGGTGGAGGTCCTGCTGGTAGGGCAGGTGGGGCAGACATGGGCGGTGGTCATGGATTGGGAGCTGGGGGTGTAGGAGCTGGCGCAGTGGGTGTGGGTACTGGTGGAGGCAGTGGAGGAGTGGGTGCCGGAGGAATGAGTGGTGTTGGCACTGGTGCTGGCGGATTGGGAGCTGGAAGCATTGGTGCTAGTGCTGGTAATGGTCTTGGGGGATTGGGCTCTGGAGCTGGAGGTGTGGGCACTGGGGCTGGAGGTGTGGGTGTTGGGGGGAATTTGGGGTTCGGCACCGGAGGCAAAGTTGACAGCAGCATGGGTGGTGTTGGATTGGGTCCAGGTGGTGGTACTGCAGGTTCAGGTGGCATGGGCACCGCTGGCAATGGTTTCAGTAGAGGAAATAGCGGTGTTGGTGGAGGCACAGGGGAAGGAATTGGTGGAGGCATAAATGGGGATGGACGTAAAGATCGTGGTATGGGTCCTGCTGGAATGGGTGGTGGAATCGGAGGGGGTAGAGGAACTGAGGGTGTGGGTGGAGGTGATGTAGGTGTTGCACTGTCAGGCATTGGTGGAATGGGTGACAGCAGTGTTGCCGGGATGCGATATGGATCCGATGGATATGACGGCAACAATGACCCCTACGCAGAGCAGGCTGTGGAGCTGACGGAGAGGAGGACGGTGCTCATTAGAACTGTTAAAAATGAGGATGACGTGCTGGAGATGGACCACCAAGAACAAACCTACACCATCACCGGTGCAGCCGACGACTCTGACGAGGAATGAGCAGCATGAATTCCCAAGTGACCTCCCCTTGGCCTTAAAGCTCCACACCCCCCTGAGCTTTGCACTGACCAAAGCCCATGTCTGGGCACTGACCTTTGCCCTTTGCCCTGGACAAGAAGACCATGAATGACCCTTTGCCACACAGGGTTTAAATATAACACTCAACATGGTCTCTAAACGTTTGTTTGCCTTACActccctccctttttttctACTTGCTGCAAATAAAGCTATAAGCATTCAA
>XM_039806663.1
TCTGACATGATCCCATTCTGTGATTTTCAGAAAGACTAATTGGTTGACGCCCTCAGCCACCATCCCAGCCAAGCTCTGCTCCTTACGATCTGCTGACAGATATCTGAGCAGCAGGTCAGGCCTGAGTTGGTGCAGAGGTTCGAGATTCCACAGGTGTTGGCTCATGAACTGGGCTGTCTTTGACAGAGCTGGGGTATGGCCGGCAATGGGCCGTATAAAACCTGAGACAATCGGGGAGTGCAAACAAGGTGGAACAGCCCTGAAGTGCAGTTAACCACAGACAAGCCCTGCTTGAGTATTTCTGTCATCTCCCTTCAGAGGACCAGAGGAAACACCGTCGCTGCCGCCACCATGAGTCGCAGCCCAGAGAGGATCTCGTCCTACCGCCGTCACTTTGAGGACAGCAGCAGCTCGTCCTACCAGGTCAGGGTGTCCAGTCCATCCCCCACCAGGAGAGACGCCCGTCATGCCTCCGCCGGCTACTCCTGCAGAGCCGGGGCCAGCGGCATGCGTGTGGAGTCAGTGGGACGAAGGAACGTCTCAGCTGCACGCAGGACTCGCATGGTTGGAGCAGGCGTGAGTGCAGGAGCCTTGGTCTGTGTTGGGCCAAGTGGAGAACCTCCTATAGATCTGGATGTGGCTGCAGCTGAAAACCATGAATTTCTCAACACCCGCAcaacagagagacaggagaTGATCGTCCTCAATGACAGACTGGCTGTATACATTGACAAGGTTCGATCACTTGAGCAGCAGAACAAGCTATTGGAAACAGAGATCGAGGCCTACCAGAACCGCTTTGAGAATCCATCCGGTCTGCGTCTCCTGTATGAGGAACAGCTGAGGGAGCTGAAAAAGATCGCTGACCAGATGAGAGTTCAGCGGGACATTTCCTTGGCGGCTAAGGAGTCCACAGCTGCCCAACTGGAGGCAATCAAAATCAAATATGAGGAGGCAGTGGAGCTGAGGAGGAAAGCTGAGTTAGACATTGAAACCTTCCGTCCAGATGTTGACAAAGCCACCTCCTCGCGCATTGCCTTGGAGAAGAAGCTGGAGCAGCTGGAAGTTGAAATTGAATTCCTAAAACGGGTCCATCAGCAGgaAATTGACGAGCTCATGAAACAGATCTACTCGGCTCATGCGTCAGCTCAGAGTGCGTTCACCCTCCCTGACCTGGCAGCTGCTTTGAAACAAATCCAAACCCAGTATGACGACATCGCAGCCAAAAATCTCCAGGAGATGGATTCGTGGTATAAAAACAAGTTTGAAGGGTTGACCAGTAAGACGTCAAGGCATGTGGATAAGGTTCGAAGCATTAGAAATGAAATAGCCGGTGCCAAAAAGGATATCCAAGGCAAAGACCGTGAATTGGATGCCATGAGGAGCAAGAATGAAGCTCTTGAGGCCCGGATCCGAGAGACACAAGAAAATCACAAGAAGGAACTGGAAGACCTTCAGGCTCGGATTGAGGCCCTGCAGTTTGAGCTGAAATCCTACAAGGAGAAAATTGCACTGCACCTGCGTGAGTACCAGGACCTCCTGAATGTCAAGATGGCTCTGGAGATTGAAATTACAACATACAGaaaACTCATCGAAGGAGAGGACCTGCGGCTCTCTGGCATGATGCAAACCCTGTCTCTCACCAGCTGTAGTGTGAGCGCCATTGGTGCTGGGATGAGCTTCAGTGGAGGCAGCATGGGTGGTGGTGGCATGGGTGGCGGGATGATGGGAGGTAGTGGTGGAGGTGTTGGAGGCACGGGGAGTGGAGTGGGAATGGGTGGGGGCATGGGTGCAGGAGGCATAGGCACAGGTCCAGGCAGTGGTGCTGGGGGAATGGGTGGAAGAATGGGTGGAGGTCCTGCTGGTAGGGCAGGTGGGGCAGACATGGGCGGTGGTCATGGATTGGGAGCTGGGGGTGTAGGAGCTGGCGCAGTGGGTGTGGGTACTGGTGGAGGCAGTGGAGGAGTGGGTGCCGGAGGAATGAGTGGTGTTGGCACTGGTGCTGGCGGATTGGGAGCTGGAAGCATTGGTGCTAGTGCTGGTAATGGTCTTGGGGGATTGGGCTCTGGAGCTGGAGGTGTGGGCACTGGGGCTGGAGGTGTGGGTGTTGGGGGGAATTTGGGGTTCGGCACCGGAGGCAAAGTTGACAGCAGCATGGGTGGTGTTGGATTGGGTCCAGGTGGTGGTACTGCAGGTTCAGGTGGCATGGGCACCGCTGGCAATGGTTTCAGTAGAGGAAATAGCGGTGTTGGTGGAGGCACAGGGGAAGGAATTGGTGGAGGCATAAATGGGGATGGACGTAAAGATCGTGGTATGGGTCCTGCTGGAATGGGTGGTGGAATCGGAGGGGGTAGAGGAACTGAGGGTGTGGGTGGAGGTGATGTAGGTGTTGCACTGTCAGGCATTGGTGGAATGGGTGACAGCAGTGTTGCCGGGATGCGATATGGATCCGATGGATATGACGGCAACAATGACCCCTACGCAGAGCAGGCTGTGGAGCTGACGGAGAGGAGGACGGTGCTCATTAGGTAAAGGTACCATCAGAACTGTTAAAAATGAGGATGACGTGCTGGAGATGGACCACCAAGAACAAACCTACACCATCACCGGTGCAGCCGACGACTCTGACGAGGAATGAGCAGCATGAATTCCCAAGTGACCTCCCCTTGGCCTTAAAGCTCCACACCCCCCTGAGCTTTGCACTGACCAAAGCCCATGTCTGGGCACTGACCTTTGCCCTTTGCCCTGGACAAGAAGACCATGAATGACCCTTTGCCACACAGGGTTTAAATATAACACTCAACATGGTCTCTAAACGTTTGTTTGCCTTACActccctccctttttttctACTTGCTGCAAATAAAGCTATAAGCATTCAA
>XM_039806664.1
TCTGACATGATCCCATTCTGTGATTTTCAGAAAGACTAATTGGTTGACGCCCTCAGCCACCATCCCAGCCAAGCTCTGCTCCTTACGATCTGCTGACAGATATCTGAGCAGCAGGTCAGGCCTGAGTTGGTGCAGAGGTTCGAGATTCCACAGGTGTTGGCTCATGAACTGGGCTGTCTTTGACAGAGCTGGGGTATGGCCGGCAATGGGCCGTATAAAACCTGAGACAATCGGGGAGTGCAAACAAGGTGGAACAGCCCTGAAGTGCAGTTAACCACAGACAAGCCCTGCTTGAGTATTTCTGTCATCTCCCTTCAGAGGACCAGAGGAAACACCGTCGCTGCCGCCACCATGAGTCGCAGCCCAGAGAGGATCTCGTCCTACCGCCGTCACTTTGAGGACAGCAGCAGCTCGTCCTACCAGGTCAGGGTGTCCAGTCCATCCCCCACCAGGAGAGACGCCCGTCATGCCTCCGCCGGCTACTCCTGCAGAGCCGGGGCCAGCGGCATGCGTGTGGAGTCAGTGGGACGAAGGAACGTCTCAGCTGCACGCAGGACTCGCATGGTTGGAGCAGGCGTGAGTGCAGGAGCCTTGGTCTGTGTTGGGCCAAGTGGAGAACCTCCTATAGATCTGGATGTGGCTGCAGCTGAAAACCATGAATTTCTCAACACCCGCAcaacagagagacaggagaTGATCGTCCTCAATGACAGACTGGCTGTATACATTGACAAGGTTCGATCACTTGAGCAGCAGAACAAGCTATTGGAAACAGAGATCGAGGCCTACCAGAACCGCTTTGAGAATCCATCCGGTCTGCGTCTCCTGTATGAGGAACAGCTGAGGGAGCTGAAAAAGATCGCTGACCAGATGAGAGTTCAGCGGGACATTTCCTTGGCGGCTAAGGAGTCCACAGCTGCCCAACTGGAGGCAATCAAAATCAAATATGAGGAGGCAGTGGAGCTGAGGAGGAAAGCTGAGTTAGACATTGAAACCTTCCGTCCAGATGTTGACAAAGCCACCTCCTCGCGCATTGCCTTGGAGAAGAAGCTGGAGCAGCTGGAAGTTGAAATTGAATTCCTAAAACGGGTCCATCAGCAGgaAATTGACGAGCTCATGAAACAGATCTACTCGGCTCATGCGTCAGCTCAGAGTGCGTTCACCCTCCCTGACCTGGCAGCTGCTTTGAAACAAATCCAAACCCAGTATGACGACATCGCAGCCAAAAATCTCCAGGAGATGGATTCGTGGTATAAAAACAAGTTTGAAGGGTTGACCAGTAAGACGTCAAGGCATGTGGATAAGGTTCGAAGCATTAGAAATGAAATAGCCGGTGCCAAAAAGGATATCCAAGGCAAAGACCGTGAATTGGATGCCATGAGGAGCAAGAATGAAGCTCTTGAGGCCCGGATCCGAGAGACACAAGAAAATCACAAGAAGGAACTGGAAGACCTTCAGGCTCGGATTGAGGCCCTGCAGTTTGAGCTGAAATCCTACAAGGAGAAAATTGCACTGCACCTGCGTGAGTACCAGGACCTCCTGAATGTCAAGATGGCTCTGGAGATTGAAATTACAACATACAGaaaACTCATCGAAGGAGAGGACCTGCGGCTCTCTGGCATGATGCAAACCCTGTCTCTCACCAGCTGTAGTGTGAGCGCCATTGGTGCTGGGATGAGCTTCAGTGGAGGCAGCATGGGTGGTGGTGGCATGGGTGGCGGGATGATGGGAGGTAGTGGTGGAGGTGTTGGAGGCACGGGGAGTGGAGTGGGAATGGGTGGGGGCATGGGTGCAGGAGGCATAGGCACAGGTCCAGGCAGTGGTGCTGGGGGAATGGGTGGAAGAATGGGTGGAGGTCCTGCTGGTAGGGCAGGTGGGGCAGACATGGGCGGTGGTCATGGATTGGGAGCTGGGGGTGTAGGAGCTGGCGCAGTGGGTGTGGGTACTGGTGGAGGCAGTGGAGGAGTGGGTGCCGGAGGAATGAGTGGTGTTGGCACTGGTGCTGGCGGATTGGGAGCTGGAAGCATTGGTGCTAGTGCTGGTAATGGTCTTGGGGGATTGGGCTCTGGAGCTGGAGGTGTGGGCACTGGGGCTGGAGGTGTGGGTGTTGGGGGGAATTTGGGGTTCGGCACCGGAGGCAAAGTTGACAGCAGCATGGGTGGTGTTGGATTGGGTCCAGGTGGTGGTACTGCAGGTTCAGGTGGCATGGGCACCGCTGGCAATGGTTTCAGTAGAGGAAATAGCGGTGTTGGTGGAGGCACAGGGGAAGGAATTGGTGGAGGCATAAATGGGGATGGACGTAAAGATCGTGGTATGGGTCCTGCTGGAATGGGTGGTGGAATCGGAGGGGGTAGAGGAACTGAGGGTGTGGGTGGAGGTGATGTAGGTGTTGCACTGTCAGGCATTGGTGGAATGGGTGACAGCAGTGTTGCCGGGATGCGATATGGATCCGATGGATATGACGGCAACAATGACCCCTACGCAGAGCAGGCTGTGGAGCTGACGGAGAGGAGGACGGTGCTCATTAGGTAAAGAACTGTTAAAAATGAGGATGACGTGCTGGAGATGGACCACCAAGAACAAACCTACACCATCACCGGTGCAGCCGACGACTCTGACGAGGAATGAGCAGCATGAATTCCCAAGTGACCTCCCCTTGGCCTTAAAGCTCCACACCCCCCTGAGCTTTGCACTGACCAAAGCCCATGTCTGGGCACTGACCTTTGCCCTTTGCCCTGGACAAGAAGACCATGAATGACCCTTTGCCACACAGGGTTTAAATATAACACTCAACATGGTCTCTAAACGTTTGTTTGCCTTACActccctccctttttttctACTTGCTGCAAATAAAGCTATAAGCATTCAA

Function

NR:

description
PREDICTED: glial fibrillary acidic protein-like isoform X1

GO:

id name namespace
GO:0005882 intermediate filament cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806662.1 False 2679 mRNA 0.54 12 2828827 2834341
XM_039806663.1 True 2882 mRNA 0.54 11 2829003 2834341
XM_039806664.1 False 2872 mRNA 0.54 11 2829003 2834341

Neighbor

gene id symbol gene type direction distance location
tstd3 NA coding upstream 502 2823361 ~ 2828325 (+)
pou3f2b pou3f2,LOC102224898,LOC107378829 coding upstream 234705 2592145 ~ 2594122 (+)
LOC120561851 LOC103355401,LOC106950884 coding upstream 239133 2318631 ~ 2589694 (+)
klhl32 klhl32,LOC102778901 coding upstream 534786 2227547 ~ 2294041 (+)
LOC120562914 slc25a32 coding upstream 627064 2193767 ~ 2201763 (+)
prdm13 prdm13,LOC102783984 coding downstream 5864 2840205 ~ 2846946 (+)
prss35 prss35,LOC104949834 coding downstream 328675 3163016 ~ 3169174 (+)
tent5aa LOC104929946,LOC103354291,LOC100698511,LOC103388593 coding downstream 664846 3499187 ~ 3503888 (+)
ebag9 ebag9 coding downstream 1019805 3854146 ~ 3872900 (+)
LOC120561648 LOC106523394 coding downstream 1054674 3889015 ~ 3890058 (+)
G70133 NA non-coding upstream 73883 2750377 ~ 2754944 (+)
G70127 NA non-coding upstream 85381 2740969 ~ 2743446 (+)
G70125 NA non-coding upstream 88349 2736504 ~ 2740478 (+)
G70117 pnisr non-coding upstream 109070 2718332 ~ 2719757 (+)
G70109 NA non-coding upstream 134381 2693110 ~ 2694446 (+)
G70178 NA non-coding downstream 82528 2916869 ~ 2917163 (+)
LOC120562089 NA non-coding downstream 118543 2952884 ~ 2953821 (+)
LOC120562087 NA non-coding downstream 246864 3081205 ~ 3082916 (+)
G70202 NA non-coding downstream 246881 3081222 ~ 3092372 (+)
LOC120562088 NA non-coding downstream 254638 3088979 ~ 3090692 (+)
G70115 NA other upstream 113426 2713437 ~ 2715401 (+)
iqcg NA other upstream 1520026 1298452 ~ 1308801 (+)
G69701 NA other upstream 1763540 1057234 ~ 1065287 (+)
LOC120561945 znf706,LOC107103982,LOC102223041,LOC103478835 other upstream 2637130 184854 ~ 191697 (+)
ube3d ube3d,LOC102787972 other downstream 498627 3332968 ~ 3367934 (+)
ibtk ibtk,LOC102788528 other downstream 607165 3441506 ~ 3475311 (+)
G70338 NA other downstream 699543 3533884 ~ 3535062 (+)
LOC120561848 NA other downstream 791597 3625938 ~ 3627681 (+)
LOC120561654 NA other downstream 800632 3634973 ~ 3635830 (+)

Expression


Co-expression Network