LOC120562784 (cpq)


Basic Information

Item Value
gene id LOC120562784
gene name cpq
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17109876 ~ 17129613 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806666.1
ACGTAACGTTTCTCTCCATCCTCAGTTCGTCTTATTGTTAACGTTTGGTTGTTGATAAAAGTAAAGCTCGGTGAATTTGACTTTGCTAATAAGGCGCAACTTTAATCTTGGTGGTGTATTTGAATGGATAGCCCAACCACAACGTTGTCAGGCGTCGACTGAAAGTAAAGTTGTACAACTTGTACAGTCGACGCCTGACAACGTTAATATTAACGTAATTAACATTAGCTACTCTGCTCTCAGTGCCACAAACATTTCATTAACGTTATTAGTCAgtggcaaaaataaaaataaataagacttgtctcgctgcagCTCTCCTCGCCCCCTCTCCCAGCCCTACCCCATCAGTCAAGCCCGTTTTGCTGCCCTCCCTGTCTCTCGTCTATGAGTCTCCCTCTCCTTTGCCTTTCTTCTCTCGCCCTGCTCCTTTGACGCCCCTAGaTGGCTCAGGAAGGTGGACCGCccttcctcttctccctctTCATGTTTCTCTTCATGCTATCATCTCTGTGTGACTGTCACCCTCACTCTGCTGGGTTCATGAGGTCAACAACTGCAGCCAGGGCTGTATCTAATCACACTGCAAGGAAAGTCTCAGACATAGCTACAGAGGTAGCAGGCTATGCTGATGTGGCCAAACAGATTATTGACCTGGCTGTGTTTGGAGCTGCCCAGAACCGCTCTCACAGACGGCTGGCTGACTTCACCGACACCATAGGGAACCGTGTCAGTGGCTCACACAACCTGGAGATGGCTATCAAATACATGTACAATGCTATGACACAGGATGGGCTGGACGTACATTTAGAGCCAGTCAAAATCCCACATTGGGTAAGAGGGAAGGAGAGTGCAGAAATGATTGCGCCGAGGGCCAAAAGTCTGGCTATACTGGGACTGGGTAGCAGTGTAGGGACACCACCTGAGGGTATCGAGGCAGAGGTGTTGGTGGTTCAGTCTTTTGAGGAACTGAAGCGTAGAGCCAGTGAGGCCATAGGGAGGATTGTGGTCTTTAACCAACCATTTGTCAGCTACGGGGAGACGGTGGCTTACCGTGCTTATGGCGCCTCTGAGGCAGCCAAAGAAGGAGCTCTGGCCACACTCATTCGATCTATTACTCCTTTTTCTATTAACagTCCCCACACAGGTTGGCAGGACTACCAAGCTGGAGTGAAGCGCATCCCTTCAGCCTGCATTACTGTGGAGGATGCTGAGCTGATGTGGCGTATGGCACAGAGAGGGCAGAAGATCGTGGTCAGACTCACAATGGGAGCCAAGACTCTGCCGGACGCTGACTCCTTCAACACAGTTGTTGAAATAACAGGCTGGCAACACCCTGAGCAGGTTGTCTTACTGAGCGGCCATTTGGACAGTTGGGATGTGGGCCAAGGCGCCATGGATGACGGAGGTGGAGCCATGATTTCCTGGGAAGCCCTGTCACTTATCAAGGACTTAGGTTTGCGTCCGAGGAGAACCCTGCGAACAGTGCTGTGGACAGCTGAAGAGCAGGGTGGAGTCGGAGCGCAGCAGTACTATAATCTACATAAGGTGAACATGTCCAACTTTGATCTGGTCATGGAGTCGGACTTGGGGACATTTACCCCGGTGGCTCTGCAGTTTACTGGCAGTGATGCAGCACGAAAGGTGATGACAGAAGTGGTCAAACTGTTGGTTCCCATTAATACGACCAAACTGGAGGCACATGGAGAAGGGACAGACATCTCACCATGGATGCAGGCAGGAGTACCAGGTGCTAGCCTCCATGTAGCAGACAATCGGTACTTTTGGTTCCACCACAGTGAAGGTGATACCATGACTGTTCAGGACCCTCAAGCCATGAATCTTTGCTCAGCATTGTGGGCCGTGGTGGCCTATGTCGTAGCAGACCTACAGGACATGCTGCCCAGGTAG
>XM_039806667.1
CACGCGCATAGACAGATCACGAGCACGGAAACGGTGTTTATATTCCGGGTATTCTagtattatatactgtctatgagtaTTCTATGAGAGTACTCTCAAAACTCTAAAAAAAGTATTGTAACATAACATCAATGATACCAAAGACTATCTGGGCCTGAAGGacttgtctcgctgcagCTCTCCTCGCCCCCTCTCCCAGCCCTACCCCATCAGTCAAGCCCGTTTTGCTGCCCTCCCTGTCTCTCGTCTATGAGTCTCCCTCTCCTTTGCCTTTCTTCTCTCGCCCTGCTCCTTTGACGCCCCTAGaTGGCTCAGGAAGGTGGACCGCccttcctcttctccctctTCATGTTTCTCTTCATGCTATCATCTCTGTGTGACTGTCACCCTCACTCTGCTGGGTTCATGAGGTCAACAACTGCAGCCAGGGCTGTATCTAATCACACTGCAAGGAAAGTCTCAGACATAGCTACAGAGGTAGCAGGCTATGCTGATGTGGCCAAACAGATTATTGACCTGGCTGTGTTTGGAGCTGCCCAGAACCGCTCTCACAGACGGCTGGCTGACTTCACCGACACCATAGGGAACCGTGTCAGTGGCTCACACAACCTGGAGATGGCTATCAAATACATGTACAATGCTATGACACAGGATGGGCTGGACGTACATTTAGAGCCAGTCAAAATCCCACATTGGGTAAGAGGGAAGGAGAGTGCAGAAATGATTGCGCCGAGGGCCAAAAGTCTGGCTATACTGGGACTGGGTAGCAGTGTAGGGACACCACCTGAGGGTATCGAGGCAGAGGTGTTGGTGGTTCAGTCTTTTGAGGAACTGAAGCGTAGAGCCAGTGAGGCCATAGGGAGGATTGTGGTCTTTAACCAACCATTTGTCAGCTACGGGGAGACGGTGGCTTACCGTGCTTATGGCGCCTCTGAGGCAGCCAAAGAAGGAGCTCTGGCCACACTCATTCGATCTATTACTCCTTTTTCTATTAACagTCCCCACACAGGTTGGCAGGACTACCAAGCTGGAGTGAAGCGCATCCCTTCAGCCTGCATTACTGTGGAGGATGCTGAGCTGATGTGGCGTATGGCACAGAGAGGGCAGAAGATCGTGGTCAGACTCACAATGGGAGCCAAGACTCTGCCGGACGCTGACTCCTTCAACACAGTTGTTGAAATAACAGGCTGGCAACACCCTGAGCAGGTTGTCTTACTGAGCGGCCATTTGGACAGTTGGGATGTGGGCCAAGGCGCCATGGATGACGGAGGTGGAGCCATGATTTCCTGGGAAGCCCTGTCACTTATCAAGGACTTAGGTTTGCGTCCGAGGAGAACCCTGCGAACAGTGCTGTGGACAGCTGAAGAGCAGGGTGGAGTCGGAGCGCAGCAGTACTATAATCTACATAAGGTGAACATGTCCAACTTTGATCTGGTCATGGAGTCGGACTTGGGGACATTTACCCCGGTGGCTCTGCAGTTTACTGGCAGTGATGCAGCACGAAAGGTGATGACAGAAGTGGTCAAACTGTTGGTTCCCATTAATACGACCAAACTGGAGGCACATGGAGAAGGGACAGACATCTCACCATGGATGCAGGCAGGAGTACCAGGTGCTAGCCTCCATGTAGCAGACAATCGGTACTTTTGGTTCCACCACAGTGAAGGTGATACCATGACTGTTCAGGACCCTCAAGCCATGAATCTTTGCTCAGCATTGTGGGCCGTGGTGGCCTATGTCGTAGCAGACCTACAGGACATGCTGCCCAGGTAGCCAGTTAGCACACAGGATGCTGAGCCTCCGCCCCCAGTGAACAGGAAGACCGGATGATGACTATGAACAGCTGGACTGGTTGATTCCAAAACACACTGTCAAAtccaatttcttttcttttttttaaatgtatttagaaaaaaattgaaattcagTTATAAAATCTTTACAAATTGAATGTTAGTTGTCCATTGTTTTTACAGTCAATGGACAAGACCAAGAACATTAGAATAGTGGACTTTCTCAGGTATTGTTTGTCTTTATGCCTTGATATATAATGTGCTGCAAAATCAAATAAGCAACAACAGTGGACTCATAAATGTGTTGAGAAATTAAGGAGCTGTTCAAATTTCCAGTGTTAAAGAGAATAACAACCTTATCTTTAAAAGATGCAGGTTTATGTTTTTTAGAAATTAGAAATATTAGGAAACATTCTTCCTAATGACACATTTACAGTGTTCTTTGAGATTTTACATTGCAGTGTTGCAATatgatcaataaagtattaatCACTGCTTTACCCCTTCAC
>XM_039806669.1
CACGCGCATAGACAGATCACGAGCACGGAAACGGTGTTTATATTCCGGGTATTCTagtattatatactgtctatgagtaTTCTATGAGAGTACTCTCAAAACTCTAAAAAAAGTATTGTAACATAACATCAATGATACCAAAGACTATCTGGGCCTGAAGGaTGGCTCAGGAAGGTGGACCGCccttcctcttctccctctTCATGTTTCTCTTCATGCTATCATCTCTGTGTGACTGTCACCCTCACTCTGCTGGGTTCATGAGGTCAACAACTGCAGCCAGGGCTGTATCTAATCACACTGCAAGGAAAGTCTCAGACATAGCTACAGAGGTAGCAGGCTATGCTGATGTGGCCAAACAGATTATTGACCTGGCTGTGTTTGGAGCTGCCCAGAACCGCTCTCACAGACGGCTGGCTGACTTCACCGACACCATAGGGAACCGTGTCAGTGGCTCACACAACCTGGAGATGGCTATCAAATACATGTACAATGCTATGACACAGGATGGGCTGGACGTACATTTAGAGCCAGTCAAAATCCCACATTGGGTAAGAGGGAAGGAGAGTGCAGAAATGATTGCGCCGAGGGCCAAAAGTCTGGCTATACTGGGACTGGGTAGCAGTGTAGGGACACCACCTGAGGGTATCGAGGCAGAGGTGTTGGTGGTTCAGTCTTTTGAGGAACTGAAGCGTAGAGCCAGTGAGGCCATAGGGAGGATTGTGGTCTTTAACCAACCATTTGTCAGCTACGGGGAGACGGTGGCTTACCGTGCTTATGGCGCCTCTGAGGCAGCCAAAGAAGGAGCTCTGGCCACACTCATTCGATCTATTACTCCTTTTTCTATTAACagTCCCCACACAGGTTGGCAGGACTACCAAGCTGGAGTGAAGCGCATCCCTTCAGCCTGCATTACTGTGGAGGATGCTGAGCTGATGTGGCGTATGGCACAGAGAGGGCAGAAGATCGTGGTCAGACTCACAATGGGAGCCAAGACTCTGCCGGACGCTGACTCCTTCAACACAGTTGTTGAAATAACAGGCTGGCAACACCCTGAGCAGGTTGTCTTACTGAGCGGCCATTTGGACAGTTGGGATGTGGGCCAAGGCGCCATGGATGACGGAGGTGGAGCCATGATTTCCTGGGAAGCCCTGTCACTTATCAAGGACTTAGGTTTGCGTCCGAGGAGAACCCTGCGAACAGTGCTGTGGACAGCTGAAGAGCAGGGTGGAGTCGGAGCGCAGCAGTACTATAATCTACATAAGGTGAACATGTCCAACTTTGATCTGGTCATGGAGTCGGACTTGGGGACATTTACCCCGGTGGCTCTGCAGTTTACTGGCAGTGATGCAGCACGAAAGGTGATGACAGAAGTGGTCAAACTGTTGGTTCCCATTAATACGACCAAACTGGAGGCACATGGAGAAGGGACAGACATCTCACCATGGATGCAGGCAGGAGTACCAGGTGCTAGCCTCCATGTAGCAGACAATCGGTACTTTTGGTTCCACCACAGTGAAGGTGATACCATGACTGTTCAGGACCCTCAAGCCATGAATCTTTGCTCAGCATTGTGGGCCGTGGTGGCCTATGTCGTAGCAGACCTACAGGACATGCTGCCCAGGTAG

Function

symbol description
cpq Enables metallodipeptidase activity and protein homodimerization activity. Involved in peptide catabolic process and proteolysis. Located in Golgi apparatus and extracellular space.

NR:

description
PREDICTED: carboxypeptidase Q isoform X2

GO: NA

KEGG:

id description
K01302 CPQ; carboxypeptidase Q

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806666.1 False 1911 mRNA 0.51 12 17110081 17129084
XM_039806667.1 True 2302 mRNA 0.47 12 17109876 17129613
XM_039806669.1 False 1628 mRNA 0.51 11 17109876 17129084

Neighbor

gene id symbol gene type direction distance location
LOC120562623 NA coding upstream 2199 17095056 ~ 17107677 (+)
mrs2 mrs2,LOC105917271 coding upstream 16000 17079407 ~ 17093876 (+)
LOC120561713 ptk2 coding upstream 44799 16995309 ~ 17065077 (+)
LOC120561714 NA coding upstream 119279 16984611 ~ 16990597 (+)
sntb1 sntb1 coding upstream 211911 16858023 ~ 16897965 (+)
mrpl13 mrpl13 coding downstream 20212 17149825 ~ 17162698 (+)
LOC120561781 tmem158,LOC102794155 coding downstream 305561 17435174 ~ 17436804 (+)
cdcp1a NA coding downstream 309480 17439093 ~ 17445194 (+)
wdtc1 wdtc1,LOC102795681 coding downstream 345955 17475568 ~ 17484853 (+)
LOC120562051 tmem222 coding downstream 356553 17486166 ~ 17489474 (+)
G72862 NA non-coding upstream 43965 17065589 ~ 17065911 (+)
G72879 NA non-coding upstream 117887 16991716 ~ 16991989 (+)
G72859 NA non-coding upstream 147036 16959788 ~ 16962840 (+)
G72852 NA non-coding upstream 378832 16730837 ~ 16731044 (+)
G72801 NA non-coding upstream 615301 16494237 ~ 16494575 (+)
trnar-acg_16 NA non-coding downstream 239090 17368703 ~ 17368775 (+)
G73019 NA non-coding downstream 262655 17392268 ~ 17403627 (+)
G73027 NA non-coding downstream 298215 17427828 ~ 17463027 (+)
LOC120562054 NA non-coding downstream 370976 17500589 ~ 17504921 (+)
G73186 NA non-coding downstream 794337 17923950 ~ 17926628 (+)
G72750 LOC104952694,LOC106925895 other upstream 1037675 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1549584 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2477155 14626478 ~ 14632721 (+)
G72506 NA other upstream 2683696 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 2739785 14175817 ~ 14370091 (+)
G73031 LOC103366415 other downstream 319972 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 327030 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 515900 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 621317 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 1269443 18399056 ~ 18420721 (+)

Expression


Co-expression Network