LOC120562792


Basic Information

Item Value
gene id LOC120562792
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29352141 ~ 29355542 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806683.1
AATAACCAGACTGTCACAGGTCCAGCATCAAACCATCAACAGTTGTGTGTGCAGGACTGTGAAGATGACTGTCATCGCTGTGGCGGCTGACAGTAAAAGCATGTTTCCATCATCCTGCCAAATCCTGAAGACTCCTCGCTCCAGTCTATTCTCTGGGTTGGTGTACCAAGGGCTGTTGCAGACTAGTGTCACTACAGCAATTGGGACTATGCAGATCATGGTGGGCCTGTTCAACATCGGACTGGGGCCAGGACGTACCAGCATAAATCCTGGAGATTTGACCAGCTTAGGTGCTGCGTACTGGCTGGGTgctgtgTTCATCGTAACTGGAATCATGTCCATTGTGGCCAGACAGTTCCCTTCTTCCTGCTTGATGGGCTTCACTGTGTTTATGAACATTGTTGGAGCGATCTTTGCAATTACTGGCATTGTGCTGTATGCCTTGGACCTGGGAAATGCCTCTCTACTCTGGATGTGTGAGAGCAGCAGCAACAATGCTGATCAAATTGGTGACAACTGCAGAAAAGTTGCACTATTTGGCCAGACTGTGTTGACATCCATGGACAACACGCTGATCGCCATGGCTGCTCTTCAGCTCTTTGTCAGTATAAGATATGCTATTCTGGGCATCAAGTATCTGAGCAGTGACATGTAAAAGGAAGAGGGGGATGTTGAAGATCAGCATCCACAGTTGAATGAAGTCCTCCTGACCTGTCCTGGTGCTCAAAATCAACTCAACTAATAACATGAAATGACTGATTTTGAATATTTTTACTGCTTGTGCTTTGACACACTCAACTGCTGAAAGTAATCAAAACTGCTTTCACAAGGACATGTTTTTTTAGTCAGCATATGCTTTTTTCTATCTATTTTGTGTGAAGTGAAAATTGCttaaattaaaacatgtaaaatggTGAAAACTGTCTAGTAAAAACACACTTCTGCTGACCACTTCCTTTGTAATGTTTCACTAATGAAATTAGGTCTGTTAATTAGCCTATACCATAGGATTTACTTACATAGtggtgttgcttttttttacctaagtaaaggatctaaaaACTTCTT

Function

GO: NA

KEGG:

id description
ko00511 Other glycan degradation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806683.1 True 1068 mRNA 0.43 7 29352141 29355542

Neighbor

gene id symbol gene type direction distance location
LOC120562836 NA coding upstream 3318 29339254 ~ 29348823 (+)
LOC120562877 LOC103362365,LOC104932167,LOC104967986 coding upstream 13167 29337456 ~ 29338974 (+)
LOC120562725 NA coding upstream 183210 29163561 ~ 29168931 (+)
LOC120561976 NA coding upstream 189851 29157669 ~ 29162290 (+)
bag6 bag6,LOC104960485 coding upstream 205516 29130309 ~ 29146625 (+)
LOC120562990 NA coding downstream 91 29355633 ~ 29361125 (+)
LOC120562942 NA coding downstream 387467 29743009 ~ 29745181 (+)
ntrk1 NA coding downstream 424637 29780179 ~ 29811789 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding downstream 770384 30125926 ~ 30133536 (+)
LOC120561633 NA coding downstream 780739 30136281 ~ 30137569 (+)
G77004 NA non-coding upstream 37516 29314099 ~ 29314625 (+)
G76995 NA non-coding upstream 50006 29296958 ~ 29302135 (+)
G76969 NA non-coding upstream 224929 29126955 ~ 29127212 (+)
G76935 NA non-coding upstream 266654 29015876 ~ 29085487 (+)
LOC120563088 NA non-coding upstream 400617 28943905 ~ 28951524 (+)
G77014 NA non-coding downstream 7691 29363233 ~ 29365430 (+)
LOC120562102 NA non-coding downstream 57717 29413259 ~ 29424203 (+)
G77033 NA non-coding downstream 77618 29433160 ~ 29439174 (+)
G77097 NA non-coding downstream 109070 29464612 ~ 29465552 (+)
G77114 bola1 non-coding downstream 227215 29582757 ~ 29585000 (+)
G77009 ubqln4 other upstream 21883 29328789 ~ 29330258 (+)
mex3a mex3a other upstream 63593 29276147 ~ 29288548 (+)
pear1 LOC104932170 other upstream 108049 29179830 ~ 29244092 (+)
LOC120562342 NA other upstream 516773 28800650 ~ 28835368 (+)
G76714 NA other upstream 782275 28553572 ~ 28569866 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other downstream 28593 29384135 ~ 29390053 (+)
G77028 LOC104942601 other downstream 48466 29404008 ~ 29412413 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other downstream 718395 30073937 ~ 30109545 (+)
G77239 NA other downstream 768160 30123702 ~ 30124638 (+)
LOC120562443 NA other downstream 995953 30351495 ~ 30360588 (+)

Expression


Co-expression Network