LOC120562797 (ctrl)


Basic Information

Item Value
gene id LOC120562797
gene name ctrl
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18806002 ~ 18808414 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806695.1
TATGGAGTGCTACACGTGGAACTCAGGTTCAGGTGTGCGCCAGTGCCAGTATAAGAGCCAGTGTCCCACACAGGTGACACTCAGAAAATAGAATCAAGATCGAGACATGGCCATGTTCTTGCTTGTCAGTTGTTTTGCCCTTGTGGCCTCTGCATTGGGGTGTGGGGTACCTGCTATCAAGCCCCAAGTGAGCGGATACAACAAGATTGTAAATGGGCAGAACGCTGTGTCTGGGTCCTGGCCTTGGCAGGTTTCActtcagGATGGTAGAGGATTCCACTTCTGTGGAGGATCCCTGATCAACCAGTACTGGGTTGTCACTGCTGCTCACTGCCGTGTGTCTGCTCAAACCCACCGTGTGATCCTAGGAGAACATGATCGTCAGTCCAACAGCGAGCAAATTCAGGTCAAGTCCATTTCCAGGGCCATCACTCACCCCTACTACAACACCCAGAACTTCAACAATGACATCACCCTTCTGAAGCTGTCCTCCCCAGTTCAGATGACATCCcgtgtgtctcctgtgtgccTGGCCTCCTCCAGCACCAACATCCCCGCTGGAACCAGATGTGTCACCACTGGGTGGGGCAAGACCGGCCAAACCTCAACCCCCCGCTACCTCCAGCAGACTGCCCTGCCTCTGCTCAGCCCTGCTCAGTGCAAGCAGCACTGGGGTAACAAAATCTCTGATGCCATGATCTGTGCTGGTGCTTCTGGAGTGTCCTCCTGTCAGGGTGACTCTGGTGGCCCTCTGGTCTGTCAGAACAGTGGAGTGTGGTCCCTTGTGGGTATTGTGTCCTGGGGAACACCTAACTGCAACGTGTACAGCCCTGCTGTGTATTCACGTGTGTCCTACCTGCGCAGCTGGGTCGACCAGACTGTTGCTTCCAACTAAAGTGCAAACACAAAAGATCTGCAATTTACATGCATGTTTTCCCATTTCCCATGATTCTATACAGCACCAATATTAGCTGTCAAATAGCAACCACTTACTGTACTGCTATGTTTGGTGCATTTGTGAGAAATcatgcataaaaaaaacaa

Function

symbol description
ctrl Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Is expressed in exocrine pancreas and pancreas. Orthologous to human CTRL (chymotrypsin like).

NR:

description
PREDICTED: chymotrypsin-like protease CTRL-1

GO: NA

KEGG:

id description
K09632 CTRL; chymotrypsin-like protease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806695.1 True 1044 mRNA 0.52 7 18806002 18808414

Neighbor

gene id symbol gene type direction distance location
hsc70 LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696 coding upstream 703 18800355 ~ 18805299 (+)
si:dkey-238d18.4 LOC104961375,LOC103359602 coding upstream 6551 18790625 ~ 18799451 (+)
LOC120562035 NA coding upstream 32180 18749085 ~ 18773822 (+)
LOC120562799 NA coding upstream 62202 18725052 ~ 18743800 (+)
LOC120562045 NA coding upstream 69417 18731402 ~ 18736585 (+)
LOC120562037 NA coding downstream 942 18809356 ~ 18812372 (+)
zmp:0000001114 NA coding downstream 125816 18934230 ~ 18956037 (+)
nphs1 nphs1 coding downstream 212740 19021154 ~ 19089959 (+)
fxyd5 NA coding downstream 287054 19095468 ~ 19101074 (+)
LOC120561940 NA coding downstream 308179 19116593 ~ 19120701 (+)
G73377 NA non-coding upstream 55203 18750345 ~ 18750799 (+)
G73361 NA non-coding upstream 113032 18687042 ~ 18692970 (+)
G73338 NA non-coding upstream 240920 18501151 ~ 18565082 (+)
LOC120562823 NA non-coding upstream 310658 18490124 ~ 18495344 (+)
G73330 NA non-coding upstream 357573 18440987 ~ 18448429 (+)
G73484 NA non-coding downstream 4895 18813309 ~ 18815597 (+)
G73493 NA non-coding downstream 63960 18872374 ~ 18873957 (+)
G73499 aplp1 non-coding downstream 100089 18908503 ~ 18911216 (+)
G73501 aplp1 non-coding downstream 102980 18911394 ~ 18932173 (+)
G73568 NA non-coding downstream 316742 19125156 ~ 19125848 (+)
LOC120562824 NA other upstream 59327 18744662 ~ 18746675 (+)
LOC120562819 NA other upstream 150271 18652386 ~ 18655731 (+)
LOC120562796 NA other upstream 168695 18632402 ~ 18637307 (+)
LOC120562806 NA other upstream 335924 18466428 ~ 18470078 (+)
LOC120562807 NA other upstream 344676 18455574 ~ 18461326 (+)
proser3 NA other downstream 10787 18819201 ~ 18828688 (+)
kmt2bb kmt2b other downstream 24831 18833245 ~ 18861958 (+)
G73570 LOC103371659 other downstream 340199 19148613 ~ 19158995 (+)
hcst LOC104925504,LOC104961397 other downstream 381606 19190020 ~ 19192102 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 638753 19447167 ~ 19453283 (+)

Expression


Co-expression Network