LOC120562799


Basic Information

Item Value
gene id LOC120562799
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18725052 ~ 18743800 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806698.1
CACATGCAACACCTCATCACGTTGCTGTAGGCTGAATGAGCAAAGGAAATCCTGTGTTAACATCTCTGCATCTGTGAAACACATGGCGTGAAGGTCTGACCCCGAGAGGACGACATGGACTTTCTCAAGTGGCCTCTGTTTTTTGTGTGCCTTTGCTCTAAGGGTTCTGAAACTGAAGGCTCATCTTGGACAATTAAGGTGCCGTCTTCAGTAAAAGGTCTCCCTGGATCCTGTTTGGTGATCCCTTGCTCGTTCAACTACCCAGATCCAGGCAGGGTGGTCACTGAATTCACTGGGATGTGGGCCGAGGGGGAACATGAGCTCATCTATCACCCAGACAAGTTAACAGTGAAGCAGTATCAGAGTCGGACAGAGCTGCTGGGAGACATCAGTCTGAAGAACTGTTCATTTAAGATTGATCCCCTTCGACAAAGTGACCAAGGGCCGTTTTATTTCAGGATCGAAATGGCAGGCTATGAAAAGTTTTCTTACAAAGAGAACAGAGTCTCCATTACAATGAGTGTACCAAATCCCATCCAGTTCTCTGTGAAAGAGGAGGTAGTGGAAGGTGATAAGGTGTCTGCATCCTGCTCAGTGTCTCACTCCTGCCCCACCTCTCCTCCTGTCTTCACCTGGAGTCAcaaaggacacacacatgtCCAACCACAGCAGCTTGACGATGGCCAGTGGAGAGCGACATCTACCATAAACTTTCAAGCTACCAGCGCTGATCACAACAAGCCTTTAAAGTGTACTGTAACATACCATGGAGGGCAGCACCAAACAACATCCAGAGACCTCAAAGTAAAATGTAAGTGTATATGGCAGTGTGGCTTTAAACACTGTAACTTAGTAAGTACGTGATActattattataca
>XM_039806699.1
tcTCTGTTCCCAGTGTCACTGAGTAGAACTACTTGCTGTGCAGTTGTTGATGTTATTGAGGTAATATTAAGCCTACTGCATCTTGCCAGCGTGGACACTGCAGTTGTTGTTTACTGTAAGCTGTCTCAACACAGTAGGCCAAGACAGAGCCTGTCTGAGCTACTTGGAATTTCACAATTTTGGTCTGACCCCGAGAGGACGACATGGACTTTCTCAAGTGGCCTCTGTTTTTTGTGTGCCTTTGCTCTAAGGGTTCTGAAACTGAAGGCTCATCTTGGACAATTAAGGTGCCGTCTTCAGTAAAAGGTCTCCCTGGATCCTGTTTGGTGATCCCTTGCTCGTTCAACTACCCAGATCCAGGCAGGGTGGTCACTGAATTCACTGGGATGTGGGCCGAGGGGGAACATGAGCTCATCTATCACCCAGACAAGTTAACAGTGAAGCAGTATCAGAGTCGGACAGAGCTGCTGGGAGACATCAGTCTGAAGAACTGTTCATTTAAGATTGATCCCCTTCGACAAAGTGACCAAGGGCCGTTTTATTTCAGGATCGAAATGGCAGGCTATGAAAAGTTTTCTTACAAAGAGAACAGAGTCTCCATTACAATGAGTGTACCAAATCCCATCCAGTTCTCTGTGAAAGAGGAGGTAGTGGAAGGTGATAAGGTGTCTGCATCCTGCTCAGTGTCTCACTCCTGCCCCACCTCTCCTCCTGTCTTCACCTGGAGTCAcaaaggacacacacatgtCCAACCACAGCAGCTTGACGATGGCCAGTGGAGAGCGACATCTACCATAAACTTTCAAGCTACCAGCGCTGATCACAACAAGCCTTTAAAGTGTACTGTAACATACCATGGAGGGCAGCACCAAACAACATCCAGAGACCTCAAAGTAAAATGTAAGTGTATATGGCAGTGTGGCTTTAAACACTGTAACTTAGTAAGTACGTGATActattattataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806698.1 False 879 mRNA 0.47 4 18737117 18743800
XM_039806699.1 True 968 mRNA 0.46 4 18725052 18743800

Neighbor

gene id symbol gene type direction distance location
LOC120561938 NA coding upstream 12084 18700302 ~ 18712968 (+)
LOC120562049 NA coding upstream 83723 18638209 ~ 18641329 (+)
LOC120562811 NA coding upstream 176855 18545673 ~ 18548197 (+)
LOC120562809 NA coding upstream 246030 18474502 ~ 18479022 (+)
smg9 smg9 coding upstream 288803 18425189 ~ 18436249 (+)
LOC120562035 NA coding downstream 5285 18749085 ~ 18773822 (+)
si:dkey-238d18.4 LOC104961375,LOC103359602 coding downstream 46825 18790625 ~ 18799451 (+)
hsc70 LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696 coding downstream 56555 18800355 ~ 18805299 (+)
LOC120562797 ctrl coding downstream 62202 18806002 ~ 18808414 (+)
LOC120562037 NA coding downstream 65556 18809356 ~ 18812372 (+)
G73361 NA non-coding upstream 32082 18687042 ~ 18692970 (+)
G73338 NA non-coding upstream 159970 18501151 ~ 18565082 (+)
LOC120562823 NA non-coding upstream 229708 18490124 ~ 18495344 (+)
G73330 NA non-coding upstream 276623 18440987 ~ 18448429 (+)
G73326 NA non-coding upstream 300649 18423989 ~ 18424403 (+)
G73377 NA non-coding downstream 6545 18750345 ~ 18750799 (+)
G73484 NA non-coding downstream 69509 18813309 ~ 18815597 (+)
G73493 NA non-coding downstream 128574 18872374 ~ 18873957 (+)
G73499 aplp1 non-coding downstream 164703 18908503 ~ 18911216 (+)
G73501 aplp1 non-coding downstream 167594 18911394 ~ 18932173 (+)
LOC120562819 NA other upstream 69321 18652386 ~ 18655731 (+)
LOC120562796 NA other upstream 87745 18632402 ~ 18637307 (+)
LOC120562806 NA other upstream 254974 18466428 ~ 18470078 (+)
LOC120562807 NA other upstream 263726 18455574 ~ 18461326 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other upstream 304331 18399056 ~ 18420721 (+)
LOC120562824 NA other downstream 862 18744662 ~ 18746675 (+)
proser3 NA other downstream 75401 18819201 ~ 18828688 (+)
kmt2bb kmt2b other downstream 89445 18833245 ~ 18861958 (+)
G73570 LOC103371659 other downstream 404813 19148613 ~ 19158995 (+)
hcst LOC104925504,LOC104961397 other downstream 446220 19190020 ~ 19192102 (+)

Expression


Co-expression Network