LOC120562809


Basic Information

Item Value
gene id LOC120562809
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18474502 ~ 18479022 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806712.1
AGGAGTTGACACTGCAATGGATGCTGACCGAGAGCTTGATCCTGGcgatgtagaaacattttaggctcaattaaaagtattaataaatgtaatatacaCAACTTAATGTATGATCGAACTGCATACCCAGACATGAACAGAACAGATGAATTGTGTAGCTCTAACCTTTCACAGTCATCTGGACTGTGCTGGCTCGTTGCTTGCTGAGCCAGGAGATGGCAGTACAGGTTAGGCTTTTGACCCCGTCTCCTCCACTCTTCTCTCTGCTCCCGGGGTACAGAGGACATCCTGCCTTCTCCACCATGGTTTCAAAACTCTGCAGCCAAATACTGGCCATGCCCCGCTGTCAGCTGTCACACACCATCCTCACTGAGAAGAACTGATCAAACTGAAACTCAGTAGAATCCTGCCATCAAAGAATGCATCTCCTGATGCTGATCTTTGGGATTGTGCTTCTCCCTAAAGCCCACACCTTGAAATGTTATGAGTGTGCACCGGGAATCTCAGGAACCTGCACAGATACATCAAAAGAATGCCCTTTGCAGGGTCAACAGTGTGGGGCAATTAAAGTCACTTCATATGCAGGTGGTTCAAAAATTCTTGATGTCAATTCAATAAGCTGTGCTTTGGCTGAAGAGTGTATTGAGGCCTCATTCAACCTTGGAATCGGCAACACCGTAATAACCAGCAACTGTTGCACCTCCGATCTCTGCAACACCCAACCTGCCCCTGAACCCAGCAAATCCAATCCAAATGGTAAAAAGTGCTTCTCCTGTGACGGACAAAAGTGCACCAACACTCTAAACTGTGAGGGGAATGAGGACTACTGCATCTCAACAACAGTGAATCTAAGAGGTCAAACGATGACTCTGAAGGGCTGTTCCTCCAGGACGATTTGCTCAAATCAAACTACGCAGGTGGCAGGAGCCTTTGGAACAGAAATTAGCTGCTGTCaggggaacttctgcaacagcgCCAGCAGCACAAGTGCTGGCCTTCTGCTCCTATTCGCACCGCTGGTCTCTTTGGTCATGCTCTCTTAACTGGTGGAAACGGCAGCATCACCACTCAGCTTTTCTCTCATCTTTGCATGGCCTCATACTGCTGCTCACACCCTGGTCCCAATCCTTTCAATGACTGAGAAAATGACTTTTGAATGACTGAGAAAGTTTAGCAAGCaaagtataaaaatataattcagtAAAATAGTTTTCTTTTTACTTGTCTCTTGCCTCATACAGTTTCTTCCAggatcattttctttttttttagtgttgCCTATAGACCATTTCACAGCTTTGCAGCTCATCCTGTTGTAGAACAAGGAGAATGTAAAAATCATCCTGATGCACAGTTTTTGTTCTGACTGCTATTATTATCCTTAAACATACTTTTAATGTTAATTATCAAGAATATTTTGATGTTACTGATAAaagctgaataaataaaaatcttaaaattc

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806712.1 True 1462 mRNA 0.43 6 18474502 18479022

Neighbor

gene id symbol gene type direction distance location
smg9 smg9 coding upstream 38253 18425189 ~ 18436249 (+)
si:dkey-79d12.5 NA coding upstream 76785 18395407 ~ 18397717 (+)
LOC120562815 NA coding upstream 86043 18387345 ~ 18388459 (+)
has1 has1,LOC102795195,LOC103143133 coding upstream 155836 18314669 ~ 18318666 (+)
LOC120562798 LOC104954816,LOC108249991,LOC102795480 coding upstream 163004 18310072 ~ 18311498 (+)
LOC120562811 NA coding downstream 66651 18545673 ~ 18548197 (+)
LOC120562049 NA coding downstream 159187 18638209 ~ 18641329 (+)
LOC120561938 NA coding downstream 221280 18700302 ~ 18712968 (+)
LOC120562799 NA coding downstream 246030 18725052 ~ 18743800 (+)
LOC120562045 NA coding downstream 252380 18731402 ~ 18736585 (+)
G73330 NA non-coding upstream 26073 18440987 ~ 18448429 (+)
G73326 NA non-coding upstream 50099 18423989 ~ 18424403 (+)
G73311 NA non-coding upstream 79307 18391339 ~ 18395195 (+)
G73307 NA non-coding upstream 143589 18330667 ~ 18330913 (+)
G73254 NA non-coding upstream 263079 18202757 ~ 18211423 (+)
LOC120562823 NA non-coding downstream 11102 18490124 ~ 18495344 (+)
G73338 NA non-coding downstream 22129 18501151 ~ 18565082 (+)
G73361 NA non-coding downstream 208020 18687042 ~ 18692970 (+)
G73377 NA non-coding downstream 271323 18750345 ~ 18750799 (+)
G73484 NA non-coding downstream 334287 18813309 ~ 18815597 (+)
LOC120562806 NA other upstream 4424 18466428 ~ 18470078 (+)
LOC120562807 NA other upstream 13176 18455574 ~ 18461326 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other upstream 53781 18399056 ~ 18420721 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other upstream 695372 17750930 ~ 17779130 (+)
G73123 phactr4 other upstream 827316 17645513 ~ 17647186 (+)
LOC120562796 NA other downstream 153380 18632402 ~ 18637307 (+)
LOC120562819 NA other downstream 173364 18652386 ~ 18655731 (+)
LOC120562824 NA other downstream 265640 18744662 ~ 18746675 (+)
proser3 NA other downstream 340179 18819201 ~ 18828688 (+)
kmt2bb kmt2b other downstream 354223 18833245 ~ 18861958 (+)

Expression


Co-expression Network