LOC120562836


Basic Information

Item Value
gene id LOC120562836
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29339254 ~ 29348823 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806743.1
TTCTGGTAACAGCTCTGTCTCTCCTTCCGGATTTCACAACAATAATAACTGCGCAACAGCCTTACTATCGGCCAGACTTTGTCAGGCGGAGTACATTTGTTCAGCTTTTTCTACtctaacagacacaaacatTCTACAGGAGCAGGCAGGATGTCTGTGACCATGACCAAGGCCGATGGGATCACAGTGTTCactgtgacctctgacccccaAAGTGTTTATCCTCCTCTGTGCCAAATCCTCAAAAGCCTTTGCTACAGCCCTGTGTGCTGCTCTGTGTCTCAGCACCTGAGAAGGGTCCAGAGAACTTCTCAGTCAGTACTGGGGGCTCTGCACATTATGGTTGGGTTGCTCAACATCGGCCTTGGAACAATAATCATTTGCAGTCTACCTTCATGGTCTCTGGTGGAATCAACCGGATTTCCTTTTTGGCTTGGAGGATTGtTTATTTTGTTTGGCACCATTGGCATTTTGTCTGAGAAGTACCCCAGTCCATGTCTGgTCATCGTCAATGTGATCCTGAATCTAGCAGGAGTTGCTTTTGCCATTACAGCCATCGTACTCTCCATCATAGATATGGCAAGCATTTACATGTGGTGGATGTGTAGCGATTACGACAATAATTACTATTCAGGGTACAGAAGACAGACTACAACTCCTACTCCTGGGCAGGACATCATGAGGGAGAAATGCTTTGAGGGAAAAGAACTGATTCTGATGCTTTTGAGAAGCATGTACGCTGTGCTGATTGTCCTGTCAGCCCTGGAGCTCTGCCTCACTATCAGCTCTGCCGTCATGGCGATCAAGGCTCTAAAGAGCAGTGAGAAGGGAGAAAAGGAGaaGACTGGGGACCCAGAACTCTACAAACCGCTGCTGGAGGAAGTCACCTGTAACCCCACAGTCTGAATGAAAATATCTGCTTTGTGCTCTGAGTTACCAGGTATAATCCTGTGCATTTATACCATTGACTGTATATCTATGTAATGTCAATGATTTAGTCAAATTCAGGTGGTATGCTTAAAagaaagagtgataaaaaaagaGTATGATTTTCTATCGAATAATGCACcataaggctctgacacaccaacccgatggcCAACCatcagcagaaaaggcagtcggactgactgcctccccgagttggtcaaaaaagtgcttCGGAACACACTGAAGCAACGCCGACTTTAgagtacgttctgcgcgtgcacgagacgtaatacgtctccataacagcaggtggcgctaatctgtattgtcacccaaaaaatgaaaaccggcagctgattggacaaacacgTCACGTCGGTCTGGCTGCTCCCAGATTTTACAACAGGGCATAATGGCGGCTTTGttcggaatacaatctcatattttacgaagatagtccaccaaaacgtgtttctgaaaacattttaagcgagaagtaggccatgcagttgctgaatctgtcttcatttcaaactgacctttgttgatcaaCAAagctcgagtcactgacctcgccaggcTGTCCAACGCCCGAAAATCAGCTTGGTGTATCAGGGCCATTACGGTCAGCTCGTGTAGGTAAAAGGGAGGTTCATTAATGTGAGTGTGTGACATTGATGGACagatatgttttttgttttctattttacaatattaagtcatcttaaaaaaaaaagtcatcgaAACTGTTGactgttcaaatgttttgttgtttgtgctTCCGCTGTGTACTTTATAATAAACCTTAAAGCCTGACACGAAAATGTAATCAGTTTAATAACTAGTTGTGCTCTTTGTGTACAAATAATAAACCGTaagtattaaagtgctcatattatgctt
>XM_039806744.1
TTCTGGTAACAGCTCTGTCTCTCCTTCCGGATTTCACAACAATAATAACTGCGCAACAGCCTTACTATCGGCCAGACTTTGTCAGGCGGAGTACATTTGTTCAGCTTTTTCTACtctaacagacacaaacatTCTACAGGAGCAGGCAGGATGTCTGTGACCATGACCAAGGCCGATGGGATCACAGTGTTCactgtgacctctgacccccaAAGTGTTTATCCTCCTCTGTGCCAAATCCTCAAAAGCCTTTGCTACAGCCCTGTGTGCTGCTCTGTGTCTCAGCACCTGAGAAGGGTCCAGAGAACTTCTCAGTCAGTACTGGGGGCTCTGCACATTATGGTTGGGTTGCTCAACATCGGCCTTGGAACAATAATCATTTGCAGTCTACCTTCATGGTCTCTGGTGGAATCAACCGGATTTCCTTTTTGGCTTGGAGGATTGtTTATTTTGTTTGGCACCATTGGCATTTTGTCTGAGAAGTACCCCAGTCCATGTCTGgTCATCGTCAATGTGATCCTGAATCTAGCAGGAGTTGCTTTTGCCATTACAGCCATCGTACTCTCCATCATAGATATGGCAAGCATTTACATGTGGTGGATGTGTAGCGATTACGACAATAATTACTATTCAGGGTACAGAAGACAGACTACAACTCCTACTCCTGGGCAGGACATCATGAGGGAGAAATGCTTTGAGGGAAAAGAACTGATTCTGATGCTTTTGAGAAGCATGTACGCTGTGCTGATTGTCCTGTCAGCCCTGGAGCTCTGCCTCACTATCAGCTCTGCCGTCATGGCGATCAAGGCTCTAAAGAGCAGTGAGAAGGGAGAAAAGGAGACTGGGGACCCAGAACTCTACAAACCGCTGCTGGAGGAAGTCACCTGTAACCCCACAGTCTGAATGAAAATATCTGCTTTGTGCTCTGAGTTACCAGGTATAATCCTGTGCATTTATACCATTGACTGTATATCTATGTAATGTCAATGATTTAGTCAAATTCAGGTGGTATGCTTAAAagaaagagtgataaaaaaagaGTATGATTTTCTATCGAATAATGCACcataaggctctgacacaccaacccgatggcCAACCatcagcagaaaaggcagtcggactgactgcctccccgagttggtcaaaaaagtgcttCGGAACACACTGAAGCAACGCCGACTTTAgagtacgttctgcgcgtgcacgagacgtaatacgtctccataacagcaggtggcgctaatctgtattgtcacccaaaaaatgaaaaccggcagctgattggacaaacacgTCACGTCGGTCTGGCTGCTCCCAGATTTTACAACAGGGCATAATGGCGGCTTTGttcggaatacaatctcatattttacgaagatagtccaccaaaacgtgtttctgaaaacattttaagcgagaagtaggccatgcagttgctgaatctgtcttcatttcaaactgacctttgttgatcaaCAAagctcgagtcactgacctcgccaggcTGTCCAACGCCCGAAAATCAGCTTGGTGTATCAGGGCCATTACGGTCAGCTCGTGTAGGTAAAAGGGAGGTTCATTAATGTGAGTGTGTGACATTGATGGACagatatgttttttgttttctattttacaatattaagtcatcttaaaaaaaaaagtcatcgaAACTGTTGactgttcaaatgttttgttgtttgtgctTCCGCTGTGTACTTTATAATAAACCTTAAAGCCTGACACGAAAATGTAATCAGTTTAATAACTAGTTGTGCTCTTTGTGTACAAATAATAAACCGTaagtattaaagtgctcatattatgctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806743.1 True 1833 mRNA 0.44 7 29339254 29348823
XM_039806744.1 False 1830 mRNA 0.44 7 29339254 29348823

Neighbor

gene id symbol gene type direction distance location
LOC120562877 LOC103362365,LOC104932167,LOC104967986 coding upstream 280 29337456 ~ 29338974 (+)
LOC120562725 NA coding upstream 170323 29163561 ~ 29168931 (+)
LOC120561976 NA coding upstream 176964 29157669 ~ 29162290 (+)
bag6 bag6,LOC104960485 coding upstream 192629 29130309 ~ 29146625 (+)
gabbr1a gabbr1,LOC103356805 coding upstream 257118 29019647 ~ 29082136 (+)
LOC120562792 NA coding downstream 3318 29352141 ~ 29355542 (+)
LOC120562990 NA coding downstream 6810 29355633 ~ 29361125 (+)
LOC120562942 NA coding downstream 394186 29743009 ~ 29745181 (+)
ntrk1 NA coding downstream 431356 29780179 ~ 29811789 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding downstream 777103 30125926 ~ 30133536 (+)
G77004 NA non-coding upstream 24629 29314099 ~ 29314625 (+)
G76995 NA non-coding upstream 37119 29296958 ~ 29302135 (+)
G76969 NA non-coding upstream 212042 29126955 ~ 29127212 (+)
G76935 NA non-coding upstream 253767 29015876 ~ 29085487 (+)
LOC120563088 NA non-coding upstream 387730 28943905 ~ 28951524 (+)
G77014 NA non-coding downstream 14410 29363233 ~ 29365430 (+)
LOC120562102 NA non-coding downstream 64436 29413259 ~ 29424203 (+)
G77033 NA non-coding downstream 84337 29433160 ~ 29439174 (+)
G77097 NA non-coding downstream 115789 29464612 ~ 29465552 (+)
G77114 bola1 non-coding downstream 233934 29582757 ~ 29585000 (+)
G77009 ubqln4 other upstream 8996 29328789 ~ 29330258 (+)
mex3a mex3a other upstream 50706 29276147 ~ 29288548 (+)
pear1 LOC104932170 other upstream 95162 29179830 ~ 29244092 (+)
LOC120562342 NA other upstream 503886 28800650 ~ 28835368 (+)
G76714 NA other upstream 769388 28553572 ~ 28569866 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other downstream 35312 29384135 ~ 29390053 (+)
G77028 LOC104942601 other downstream 55185 29404008 ~ 29412413 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other downstream 725114 30073937 ~ 30109545 (+)
G77239 NA other downstream 774879 30123702 ~ 30124638 (+)
LOC120562443 NA other downstream 1002672 30351495 ~ 30360588 (+)

Expression


Co-expression Network