zgc:114181 (LOC104932954,LOC102799802,LOC101469313)


Basic Information

Item Value
gene id zgc:114181
gene name LOC104932954,LOC102799802,LOC101469313
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 8187287 ~ 8198861 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806766.1
CGGGGCCCAGTGGGAGGGGCACATGAAGGGAGGCTATATAAATGTCTTGGCAGCAGCACAAGGCCCGAGGAgagcgccacacacacacctccagcaGAGACAAGATGAATGTTCCAGTTCTGCCCTCCATCCTGCTGCTCATCTCTACTGCCCATGCCTTCCAGTACACGGAGCTTGCACAGCACATTGACAGCCATCAAGAAGAATATGTGGAGGCTCTAAGGGACTGGATTGCAATCGAAAGCGACTCCAGCAACGTCTTAAAGAGAGCCGAGCTGCACCGCATGATGGACATGACGGCTCAGAAGCTGAGGCCGATGGGAGGGACTGTCGAGCTGGTGGACATCGGAGAACAAGAACTTCCGGACGGCCAGACGTTAGCGTTGCCTAAAGTGGTGACGGCTCAGTTTGGCAATGACTCAAACAAACTCACAGTGTGTGTCTACGGTCACGTGGACGTCCAGCCAGCGAAGCTAGAGGACGGCTGGGCAACAGATCCCTACAACCTGACGGACATCAACGGTAACCTGTATGGAAGAGGAGCGTCAGACAACAAGGCTCCAGTTTTAGCGTGGATCCATGCTGTGGAGGCGTACCAGGCCCTTAACATGGAGCTGCCGGTCAATGTGAAGTTTGTCATCGAGGGCATGGAGGAGACGGGCTCTAACGGCCTGGACGCCATGATCGTGGCCCAGAGAGACACCTTCTTCTCCGACGTGGATTACATCATCATCTCAGACTGCGGCTGGCTGAGCCGGCGGCCCGCCCTCACCTACGGCACCAGAGGCAACTGCTACTTCTTCGCTGAGgttgaaGGACCTAAACAGGACTTACATTCTGGTGTTTATGGAGGCTCAGTGATTGAACCAATGACTGACCTCATTGGCATTCTGGACACGCTGATCAGCCCCAGCGGTACGATCCTGATTCCCGGGATCAGGGAAGCTGTGGCTCCTCTCTCTGATGATGAATGGAAAATGTATCAGGACATCCAATTTGACATCGAAAACCACAAGAACAAGACCGGTGTCAACCAGCTCATGTACAACAATAAGGTGGACCTGTTGGCCCACATGTGGCGCTACCCCACTGTCTCCATCCATGGCATCGAGGGGGCCTTCTCAGACCCTGGCACAAAGACGGTCATCCCTGCTAAGGTCACTGCCAAGTTCTCCATTCGACAAGTTCCCAACATGGACCCTGCTATGGTCAAGAAACAGGTAACAGACTACCTTCACTCAGTGTTTGCAAAGCGGAAGAGTCCCAATAAGCTGAAAGTCACGATGGTGATCGGGGCCAAGCCTTGGCTGGCCGACCCTCAGCATGCTCTCTACGAGGCCGGGAAGGCTGCTGTGAACAGAGTTTTTAACACGGATCCTGACCTGATCCGCGAGGGCGGGACCATCCCCATCGCCAGAACCTTCCAGGATGTGACGAGGAAAAGCATCATCATGATGCCCATCGGAGGCTTCGATGACGGCATGCACTCCCAGAATGAGAAAATAAGCAGGTACAACTATATCGAGGGAACCAAGTTATTCGTCTCCTTCCTGTATGAAGTGTCCCAGCTGAAGAAGACCAGCGTGTGATGAGCTCCTGACACAAGCCTACTTAATATTTTCACTGTGACTTCATCTTCCTTCCATCCACTGTTCTGTGTGCTGCTAAGCTTGAATTTATCTGCATCTGTAAaatctatcaatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctattgatCTATCTattgatctatctatctatctctatgtatgtctgtactgtaagtgtgtgtgatgtaataAAAGCTGTACAGGCCTACAATGCAA

Function

NR:

description
Cytosolic non-specific dipeptidase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0034701 tripeptidase activity molecular_function
GO:0016805 dipeptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function

KEGG:

id description
K05604 CNDP1; beta-Ala-His dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806766.1 True 1860 mRNA 0.51 12 8187287 8198861

Neighbor

gene id symbol gene type direction distance location
rwdd1 rwdd1 coding upstream 65961 8114521 ~ 8121326 (+)
LOC120561725 fam26e,LOC103478772,LOC106963711 coding upstream 77922 8104864 ~ 8109365 (+)
LOC120561897 NA coding upstream 82438 8104249 ~ 8104849 (+)
LOC120561724 fam26e,LOC103478772 coding upstream 82895 8096361 ~ 8104392 (+)
LOC120561722 NA coding upstream 90995 8091652 ~ 8096292 (+)
pomgnt2 pomgnt2 coding downstream 165495 8364356 ~ 8384620 (+)
LOC120562241 NA coding downstream 255903 8454764 ~ 8504452 (+)
LOC120562991 LOC103388880 coding downstream 889323 9088184 ~ 9101502 (+)
popdc3 popdc3 coding downstream 916850 9115711 ~ 9123087 (+)
bves bves coding downstream 928989 9127850 ~ 9144754 (+)
G71306 NA non-coding upstream 34821 8127699 ~ 8152466 (+)
G71305 NA non-coding upstream 54500 8132249 ~ 8132787 (+)
G71226 NA non-coding upstream 75862 8103284 ~ 8111425 (+)
G71220 NA non-coding upstream 118163 8068055 ~ 8069124 (+)
G71201 NA non-coding upstream 126486 8060110 ~ 8060801 (+)
G71323 NA non-coding downstream 92 8198953 ~ 8199908 (+)
G71325 NA non-coding downstream 17816 8216677 ~ 8236718 (+)
G71326 NA non-coding downstream 28974 8227835 ~ 8310764 (+)
G71334 NA non-coding downstream 112990 8311851 ~ 8314761 (+)
LOC120562242 NA non-coding downstream 274409 8473270 ~ 8474591 (+)
G71309 NA other upstream 65048 8121601 ~ 8122239 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other upstream 385907 7731022 ~ 7801380 (+)
znrf2b znrf2 other upstream 687105 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 894852 7039163 ~ 7292435 (+)
G70894 NA other upstream 2226433 5960455 ~ 5960854 (+)
ano10a ano10 other downstream 84519 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 550082 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 561185 8760046 ~ 8776508 (+)
trnay-gua_1 NA other downstream 611490 8810351 ~ 8810439 (+)
trnay-gua_2 NA other downstream 611873 8810734 ~ 8810823 (+)

Expression


Co-expression Network