tars2


Basic Information

Item Value
gene id tars2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22490753 ~ 22506497 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806779.1
CCGCTGCTGTCCTAATCTGGGTTTCCGGTGTTATGGCCGCTTGCAGAGAAGGGCGACAGTAATGCGGGGTATTTGGAAATGACCGCGTGTGTTTAGGATGGCGGTGACCCAGCTGTTTCGACTGGTTATCTGTCGGTCGGCAGCTCGTGCGACGCTTCGCGTGCACAGGAGGTACAGCAAGGTGTGCCCAGCTTCATCTGAGCGACTGCGAGTCTTTGAGTCCTTCAGGGCAAAACATAGCAATAAGAGGAGATTTGAAGTTCCAGAaactctcctcactatccgacTGGCTGACGGCCGGACAGTAAAGGGAACAGCTGGTGTCACCACACCTCTCTTTGTTGCTCAGAGTGTCCGTGTGAAAGGTGCGCTGGTCAGTAAGGTGAATGGAGAGTTGTGGGAGCTTGGACGGCCCCTAGAGGCAGACTGCGAACTACAACTTCTGGGGTTTGACACAGTTGAAGGAAGACAGGCGGCATGGAGGACAGGAGCGTGCGTCCTGGGTGGAGTGTTGGAGAAGGTATTTGGTGCCGAGGTGTGCAGAGAAGGAGCATCGGAGCTCGGGCTTTACTGCGACCATCTGCTGGACAACAGTGCCTTGCCTCTGAGTGATGTGGAGGACAGATGTAAACAGGCTGCAGCCCTCAAACTTCCTCTGTCCAGACTGGAGCTGAATACAGAAGAGGTCCAAGAGCTCTTCCAGAACAGTAAGCTAAGAATGCAGCTTGTTGAGGAGCAGATGAATGGCCCCACCATCACAGTATACAGGTGTGGAGACAGTATAGCGGTCTGCAACAGCCCCCTCCTCCCACACACTGGCCTCCTCAAGGTCTTCAAGAcaatccagCTGTCGCCCGTGACTCTGGCCAATCAGACAGAGTCCTCAGGTTTGATGCGTCTTTTAGGTGTAGCCTTTCCAGGAGAGAAGGACAAGGAGGAGTGGGAGAGGGAGCAGGAGGAGGCGAGGAGAAGGGACCACAGACGCATAGGGACGGACCAGGAGTTGTTCTTCTTTAATGATGTAAGTCCAGGCAGCTGCTTTTTCCTGCCTAAAGGAGCATACATCTACAACACCCTCACTGACTTTATTAAGAGTGAATACCGAAGGCGAGGATTCAACGAGGTTGTGACCCCAACCCTGTACAGCACTGCATTATGGGAGCGCTCGGGCCACTGGGAACACTACAGCGAGAACATGTTCACTGTGACATCAGAGGGCTCTCAGACCTACGCTCTCAAACCCATGAACTGTCCTGCGCACTGTCTTATGTTTGAGCAGCGTGTTCGCTCGTGGAGGGAGCTTCCTCTGCGATGGGCCGACTTTGGGGCGCTGCATCGAAATGAGCTCTCCGGAGCGCTGGGAGGTCTCACTCGTGTTCGAAGGTTCTGCCAGGACGATGCTCACATCTTCTGCACACCTGAGCAGCTGGAAGAAGAGATTGTGGCATGTTTGGATTTTGTGAAGAGTGTGTATCAAGTTTTTGGATTTTCCTTCCACTGCCTCCTGTCTACACGTCCTACACCATGCCTCGGGGAGCCTGAACAATGGGATAATGCTGAGCAgcagttgGAGAGGAGTCTGCAGCACTTTGGTGAATGTTGGGAGTTGAACCCAGGAGACGGAGCCTTCTATGGACCAAAGATTGACATCCAGATCAAAGATGCTATTGGCAGACAACACCAGTGTGCCACAATCCAGTTGGACTTCCAGCTGCCGATCAGATTTGATCTTCAGTATGTCGGTCGGGACGGACAGTTGCACAGGCCAGTGATGATCCACAGGGCAGTGCTGGGATCACTGGAGAGAATGATCGCTATACTGGCTGAAAACTTTGGAGGGAAATGGCCACTGTGGTTGTCCCCAGCGCAGGTCATGGTAATTCCTGTTGGGGGCAACAGTGAGTCATACAGCAAACAGGTGGTCCGGCAGTTCTGTGAAGCTGGCTTCATGGCAGATTTGAATGATGATCAGGGAGCAACCTTAAATAAGAAGATTCGCTCTGCTCAGCTGGCCCAGTACAACTACATATTTGTGGTGGGGGATAAGGAGAGTGAGAGTGGAACGGTAAATGTGAGGAGCAGAGGGGGTAAACAGCTTGGGAGGAGGCCGACAGAGGAGGTGCTTACATCCCTCACCCAGCTACGAGACACGAGGAGCAACCTAGACGAGTTTTAATGGAAAAAGTCCTGGAAAGAAGGAGTCATTGATgtaataaatgtttgttttacatgTTCAAGCTGTTATACTTTGGCTTTGTCTGAAGAGATGGCTGCTAAAATTTGTAATTAAAGTATATAAAAGATTCCTTA

Function

NR:

description
threonine--tRNA ligase, cytoplasmic-like isoform X1

GO: NA

KEGG:

id description
K01868 TARS, thrS; threonyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806779.1 True 2310 mRNA 0.52 18 22490753 22506497

Neighbor

gene id symbol gene type direction distance location
prpf3 prpf3 coding upstream 20971 22461131 ~ 22469782 (+)
LOC120562192 LOC104934671 coding upstream 35031 22448519 ~ 22455722 (+)
polr3c polr3c coding upstream 124600 22357791 ~ 22366153 (+)
gba gba coding upstream 145203 22339629 ~ 22345550 (+)
dap3 dap3 coding upstream 151820 22332416 ~ 22338933 (+)
adamtsl4 LOC104944899,LOC101074756,LOC106573456 coding downstream 12621 22519118 ~ 22556292 (+)
cers2b cers2,LOC108241136,LOC102789054,LOC101467232,LOC102212238 coding downstream 82630 22589127 ~ 22606928 (+)
LOC120561960 NA coding downstream 120850 22627347 ~ 22627532 (+)
setdb1b setdb1 coding downstream 123120 22629617 ~ 22643078 (+)
LOC120561656 NA coding downstream 136849 22643346 ~ 22651387 (+)
G74769 NA non-coding upstream 235275 22255271 ~ 22255478 (+)
G74765 NA non-coding upstream 244990 22245489 ~ 22245763 (+)
G74764 NA non-coding upstream 247720 22242817 ~ 22243033 (+)
G74760 NA non-coding upstream 306716 22183783 ~ 22184037 (+)
G74737 NA non-coding upstream 360839 22129652 ~ 22129914 (+)
G75042 NA non-coding downstream 412255 22918752 ~ 22920103 (+)
G75045 NA non-coding downstream 418095 22924592 ~ 22925155 (+)
G75065 NA non-coding downstream 476395 22982892 ~ 22987322 (+)
G75069 NA non-coding downstream 487923 22994420 ~ 22994706 (+)
G75077 LOC104960445 non-coding downstream 510310 23016807 ~ 23018595 (+)
rprd2b NA other upstream 809 22469978 ~ 22489944 (+)
rusc1 LOC104958857 other upstream 178233 22264939 ~ 22312520 (+)
fam189b fam189b,LOC102796117 other upstream 202459 22279556 ~ 22288294 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other upstream 242226 22197712 ~ 22248527 (+)
snx27b snx27,LOC102196713,LOC102288812 other upstream 336069 22139780 ~ 22154684 (+)
celf3b LOC104944900,LOC100708447,LOC107088821,LOC107379582 other downstream 53447 22559944 ~ 22585572 (+)
arnt NA other downstream 103521 22610018 ~ 22625953 (+)
LOC120562537 NA other downstream 153982 22660479 ~ 22667885 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other downstream 182573 22689070 ~ 22705416 (+)
myh14 NA other downstream 279081 22785578 ~ 22820053 (+)

Expression


Co-expression Network