adamtsl4 (LOC104944899,LOC101074756,LOC106573456)


Basic Information

Item Value
gene id adamtsl4
gene name LOC104944899,LOC101074756,LOC106573456
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22519118 ~ 22556292 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806780.1
gaaagagagagagggagttgTGTAATCTGTCCATTTTGTGTCTCCTgtctcccccttctctctcccccctggCCCCCTGGCTGCCAGGCGTCACACCAGTTTATAATAAGGACCCAAAAAAAGTTGTCGAGTGAACgggctgaaagaaaaaaaacggaaTCCTTCCCACTCTCCTAAAATCACTGAGAGTGACTGTGACAGGAGgaaggggacagagagagtgagagagagctgaagaagctctcacaGGACTTCATCAGAATTTCTTTCAGGACTGCACGGACCGGAACGGACCTCTAACCGACCACTAAACCTGGACTGATAATCAATAGCGGTGATTAGTCGCGGAGTGAGAACTGTTGTGGGAGATTCTTGGAGGAGCATGCGGCTCGGTTTACTATTCAGGCTCTATGTGCTGTGGGGCTTTGTGGTGGTCTCGACCTCCGTGACCAAGGCAGCCAAGAAGAAGGTGGTAGGCAGACGGTCCAGACAGGTGTTTGAGGCGGAGCCTGTGGAGGGGGTGTGGTCTGTCTGGGAGGAGTGGTCTGACTGCTCTCAGACCTGTGGTGCGGGCGTCTCACAAAGGACCAGGAAGTGtttacctcctcctcctcctcctccacctccccaaacccctcccctctcccactcTCCACCTAACTGGGCAGGTTATTTGCCCGGGGGCATCGGAGGTCCTGTCATCTCACCTGTACGCCCCTACTACCCTCCTCGTTACCCCGGGCAACACCAGCCTTATCAACAGTCCCCGTCGATttccaccaatcacaaccaagGTTTGTCTCTGTATCGGAATACCAACGTGAGGGGAGAAGACGGAGGAGGACGAGCTCCTGTCCCGGGACAGGCCAATCCAAACCCTCCTTTTTACCAGCCAGGAGCCTCCCCAAACAATCAAGAACATGTGTCCATTTACCGATCGCCCTACAGCGCTCCTTCACACAGCTACAACCAGCCAGCACGCACGATCAGGAGGCCGACCAATCCATTAGCAGCGAGGGCTGCAGGAGGCGGGAGCAGAAGGTCGATCTCCCCCAATCGGGAGGGTTTGCCTGCGAGGAGGTCTTCCGCCATCCGTCCAGGTCAGTTTGGGTATGGCAGGGTCCcgttctctctgcctctgcatCGTCCCAACCGGCAGGCTCGGCACACTGTTAACGGCACTGACGCTGAAACATCACCTGGACTCGATGAAGATGAAGCAGAGAAtgaaaggaaagaggaagagaagacgGGGAGTgatggagaagacatggaggcAGGGAGgcgtgaggaggaggagagcacTGAGACACCTGCTGCTGAGGAGTTTCCCATGACAGCCACCGCAACTGGCAACCCACCCCGCCACGTTGACCGACCCCCACAAACTGATACTGAGCACGGGAGGGCAAGACAGCAAGCCCAATCCTCGCACTCCTTCTCACGCTCCTCGCCTCAGCCCAACCGCCACCGGTTTGACTGGCACTCCCTCACTGCACCGTCTCCTCCCATCCATCCTCTCTCCCGGCCAAACTCCCCTGCCCTCACTTCACCTTTTTCCTCACCTCTCCACCGCTCCAGCCCCATGCACAGAGACAGGGAGGTCCACCCAGGCTTCATCCCACACGCCCCACCAGCCAGCGACATCTACCCACTACAGCACCCCACCATCCCGCACCTGGGTGTGGAATCAGGCagggatggaggaagaggagttcCTCAGGTCCACAGATGCTCTGGGCCGGAGAAGGAGTATCGTAGGTGCTTCTCACAGGTTTGTGGAGGAGGTGCGTTGGACTCCAGAGCAGAGCAGTGTGCAGCCTTTAACACCCAGGAGTTCATGGGTCGCCTCTACAACTGGGAACCTTTCACTGAGGTTGGTGTGGAGAAACAGTGCGAGCTGACCTGCAGACCTGCCGGCTATCGCTTCTATGTCCGCCAGGCCGAACGCGTCAGAGACGGGACCCCCTGCTTCAACTTCAGCTCCAACGACGTGTGTGTAGAGGGACAATGTCTGACCGAGGGTTGCGATGGGGTACTGGGCTCCGGCTCTGTGATTGACAAGTGTGGAGTGTGTGGTGGGCAAGAAAACTCCTGTCGAAAGGTGATGGGAAGCTTCCAAAATGTCACGGTTCCCCTCGGTTACCACAAGATCCTGGACATCCCGCCCGGAGCTACATTCATTAACATCACAGAGAGACAAGCCAGCCCTAATTACCTGGCCATGAGGAGTGGCACAGGGGCTTCAGTGGTGAACGGGCGTTGGGCTGTGGACCCACCTGGGGAGTACCAGGCAGGAGGGACTACCTTCACTTACACCCGACCAAGAGCACAGGCggagggggaggaagagaaagGCGAATCCCTCAGGGCTCCAGGACCCACCACCACACAGCTACAGCTATATATTATTTTCCACAAGGAGAACCCGGGCATCAACTATGAGTTTTATGTCCCCGTGGAGAGGGAGGTAGAGAGGGAGAGgccgacagagagagagagggagacacccAGAGAGAGGCCGAGGGATCGAGAGCCAGGGAGGTCACCCCTTCGCAGTTCTCTCACTGTGTCAGTAGAAgaccctcctcctgctcctcctcctatTTCATTCCCTTCTTTCCCCTCCACCTCTGTgttctctcccccctcctcgGACCGATGGACACCTGAGAGGTCACGTCCTCGAGGCTCTGCACCCAATAGGAATGCTCGGATCCCCCCTCGCACTGACCTGCCACCGGACACACAGCCACCGTTTGTGTGGAGAAGAGGAGGACTCACAGAGTGTTCTGCTTCCTGTGGCAAAGGTTATCAGAACAGAGTCATTCTGTGTATAAACCGCCATACAGACGAAGAAGTGCCAGAGAGGAAGTGTGACTCTGCAGCCAAGCCGGGTCCTGAGGAGGAGCCGTGTAACACACATCCCTGCCCACCGTtcTGGGAGGCCAGTTCATGGTCAGAGTGCAGTGTGTCCTGTGGCCCTGGGGTGCAGCAGAGGCAGCTCCAGTGCAGGCAGAGCTTTGGGAACCGCTCCACCATGGTTCACCCACAGCGCTGTGCCAACCTTACGCCACTAGAGTCCACACAGAAGTGTCAGCTCGGCCTCTGCTCCCACTGGGAGGTCGGCTCAGACTGGAGCACGTGCTCCGTGGACTGTGGAGTtgggaggaggacgaggagtgTGCGCTGCATCAGCGATCAAGGCAGCGTGGTGAACGAAAAGGAGTGCAACTCCAGGGCTCGCCCGCAAGGAAGCGAGGAGTGCAACATGGGCCCCTGTGTAACCAACTGGTACTTCACTGACTGGTCCAACACTTGTTCGGCGCAGTGTGGCCCCGGGGTGCAAAGGAGGGAGGTGTTGTGTCTGACTCGAGGAGGGGTCAgagagggtggaggaggaggagactgtgTTGGGGAAAAACCGGCAGAGATGAAGGCCTGCAACGGGGGTCCCTGTGTGCCAACAACCATGTGGTACAGCAGCCCCTGGACACAGTGTAATGTCCCCTGTGGGAATGGATCTCAGCGACGAGACATCATTTGTGTCCAGAAGATGGGGAATGATTTTACTGTCGCACCAGCCAGTGAGTGCGCTCATCTGGACAAACCTGCCGCGGTCCAAGAGTGTGAGATGGAAGAGTGTGAGCCACAGTGGTTCACAACAGAGTGGAGCGCGTGCTCACGTTCTTGTGGAAAAGGTTTACAAATGCGGGAGGTACGCTGTCTAACACCAGACAAAAAACACAGCCATGAATGTGATTTCAACACCAAACCTGAACAGGAGCAAATCTGCAACACAATACCCTGCAGTCCACAAGTCacagATGAAAATTGCCGGGACAGACGTCACAACTGTGTGATGGTGGTTCAGGCCAGGCTGTGTGTCTACTCCTACTACAAGACTGCCTGCTGTGCCTCATGTACCCAAAGTGCTCAGCGTGCCAAGAGGCACTGACCAGCCAATCACACAGACAGTCACAGGTGTGCGATAAGTTAAGGATTAAGTCAAAAGGGCTGAAATGAGAAGTCTGTAGAAATGGACAGCCCAGAGTAGACATAATCCTTGCAGTGGCCGTCAGATAACATTTAGCtattttctcctgattcttccggTAAATAACTGTGAAAGCAGCCAGTTCCTTTTTCCAGTTCTCTGTATATGATTTTAGAACCACATATTCCACTGAGATTGCATCTGTTTACTTTGTGCGTTAGCTTTAACAGGTTCATAATGTGTCACAAAATGCTGTTGCATTTGCTGTGATTTCAACTCTTGGAGGCTGATTTTGAAGGCTGAGCGATTATAATGGAAGGTGCTGACTGAGGACACAGCTGTGTTTCAACAGCAAATGTaggcttttttttaagattctctTTAATCTACAGGATCTTAAAACAGACGTAATCAGACATGCATACCACTAATTATGCAAAGAAATATGCTGAACAAATAATGACCATGTGTGCTAGATAAACTGTGTATACTGTAGTACTACTTGTGCTGAAGATCTACTGGAATAGATCTACTGTGTTTCTGTACACTGCAGACCCCCAACTAAGCTAGAAGGTTTTAATTAACATATCGTTCATCTTTTTTCAGTTTGCCAAAAATATTTTCTCAAGCGTCCTCTTATTGTTCAGTATTTGGACAGATGAACCAAAGGAGTGGGGTGACCATGGCAGTTAGTGACCAAATATATCAGAGCGTGAAGAAGTGAGATTCTTCCTAAACAAGGATTATTAGACATGGATGTTAAACAAGCAACACAGAGTCTGTACAGTCCTATTCATGTCAGTTACATACATGTAGGTCTTTTTAAAGAGAGCTGTTTGAGTTGTGTTAAAATCCACAGCTAAGGTGTCATAGTTGCAGTTATGTTCTTAAAAAACTAAAGACAATGCTGCTTACTGACtaacagacaaaaaaatgtaattgtcaaGCGATAAGATGATTCTATACTTTTCTACTTGTCAACAAATCACATAAAAGAcgaaaccaa

Function

NR:

description
PREDICTED: thrombospondin type-1 domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806780.1 True 5003 mRNA 0.53 17 22519118 22556292

Neighbor

gene id symbol gene type direction distance location
tars2 NA coding upstream 12621 22490753 ~ 22506497 (+)
prpf3 prpf3 coding upstream 49336 22461131 ~ 22469782 (+)
LOC120562192 LOC104934671 coding upstream 63396 22448519 ~ 22455722 (+)
polr3c polr3c coding upstream 152965 22357791 ~ 22366153 (+)
gba gba coding upstream 173568 22339629 ~ 22345550 (+)
cers2b cers2,LOC108241136,LOC102789054,LOC101467232,LOC102212238 coding downstream 32835 22589127 ~ 22606928 (+)
LOC120561960 NA coding downstream 71055 22627347 ~ 22627532 (+)
setdb1b setdb1 coding downstream 73325 22629617 ~ 22643078 (+)
LOC120561656 NA coding downstream 87054 22643346 ~ 22651387 (+)
clk2b LOC104944907,LOC101465036,LOC102211389,LOC100710865,LOC102298503,LOC102787711 coding downstream 95346 22651638 ~ 22657098 (+)
G74769 NA non-coding upstream 263640 22255271 ~ 22255478 (+)
G74765 NA non-coding upstream 273355 22245489 ~ 22245763 (+)
G74764 NA non-coding upstream 276085 22242817 ~ 22243033 (+)
G74760 NA non-coding upstream 335081 22183783 ~ 22184037 (+)
G74737 NA non-coding upstream 389204 22129652 ~ 22129914 (+)
G75042 NA non-coding downstream 362460 22918752 ~ 22920103 (+)
G75045 NA non-coding downstream 368300 22924592 ~ 22925155 (+)
G75065 NA non-coding downstream 426600 22982892 ~ 22987322 (+)
G75069 NA non-coding downstream 438128 22994420 ~ 22994706 (+)
G75077 LOC104960445 non-coding downstream 460515 23016807 ~ 23018595 (+)
rprd2b NA other upstream 29174 22469978 ~ 22489944 (+)
rusc1 LOC104958857 other upstream 206598 22264939 ~ 22312520 (+)
fam189b fam189b,LOC102796117 other upstream 230824 22279556 ~ 22288294 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other upstream 270591 22197712 ~ 22248527 (+)
snx27b snx27,LOC102196713,LOC102288812 other upstream 364434 22139780 ~ 22154684 (+)
celf3b LOC104944900,LOC100708447,LOC107088821,LOC107379582 other downstream 3652 22559944 ~ 22585572 (+)
arnt NA other downstream 53726 22610018 ~ 22625953 (+)
LOC120562537 NA other downstream 104187 22660479 ~ 22667885 (+)
LOC120562539 LOC102295960,LOC100711672,LOC102209551,LOC101487210,LOC102786116 other downstream 132778 22689070 ~ 22705416 (+)
myh14 NA other downstream 229286 22785578 ~ 22820053 (+)

Expression


Co-expression Network