si:ch211-197h24.6


Basic Information

Item Value
gene id si:ch211-197h24.6
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21161670 ~ 21167686 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806827.1
ACTTGTTAAATTTCGTCTGTTTAAAACTGGCAAAATAACTGCTTCCTATTCTCTCCCATATCCCTCCGAATCGGCTTTGTTTTTTCTCATCATAGCGAATGTGTTCTGCCGACCTTGCGCTTTGAGGAACCCGCAGTTTGCATTAAAACATCTCGGGTAGGTTAGGTAATATTATCTTACCGCTTAACCAGTGGAGACATACATATGATATTTGACGTTTGGAGTTTTGTTGTCAAAAAGCACGTGGAGAAACAAGAAATGGAGGCTCATGCTTCAGCCAACCAGCTTCCACCTAAAAATGGGCCGCAGTCTAATCAAAGGAGAAATGCCAGGAGAAAGCAGCTGCAGCATTCTGCTGATATAGTATTTACCAAAGGGACATCTATCCAGACCATTCCCTCTCTTAGCAAACTCTTGAAAGGGGTAACGGAGTGTGTCATTGGTCTTCAGTATGTGTGGGAGTACCGCAGCCCCAGTAAATCTGTCCCACCACACTACCAGTGCAAACTCTGTGCTGTCTCCCGCTTGCAGCATGATATGCTTGCCCACGTGAAAGGCTGGAAACACAGCTTCAAATACCTGAAAAAGGTCCACCCTAACAAGGTCACCAATGAAGAGGAAGAGGCCATCAGAGACCCTGCTGTAAGGAAGAAAATTAAAGAAGTTTCAGCTGAGGTGGAGAAGACCGAGGGGAGGGGACAACTCAAGGTGATTCTGAAGGAGCCCTGTGAAGTACTAGCTTTCAAAGGACTCCGTTCTGCTGCTCCTAAAGTTTTGCCTACACCAGGACCAGGGATGGGACTAAAGGGACCACCCTTTGgTCTCTCAGGTCCCAAGTTCTCTGACCAGAGGTTTCTAGGGGAGTTTCCTCCTCAGAATGGTCCTCTCTCTAACTATCCAGTGGGAGACTATGGGGAGTCCGGCTTCGGAGGCTATGATTACTCGACCAGGCAAGATTTCCATGACTCTGGTATGGATCGAAGACCTTTCCCAGATGGTATGGGTAATCGCCCAGCTGGGATTGGAGATGGTTTTGGATCAGGTGGTGGAAGAGATGGCTATGGAAGGAGTGGACTACTGGATGACAACCCAGGCAGAATGTATCCTGATGAGTACCGGGACAGCCAAATGGGGAGTAGCTTAATGGACAGACCAATGGACAAGCCACTGGAGAGGCCAGGCTTGATGGGAGCAGCTCCAGAAAGTAGCAGCCTTCCTAACACACTACTTACTTACCTGGATACTTTCCGGATAGAGAGCGAGAGTGACGCACAGCTGGTGCTGAAGGTGACACAGAAACTTACAGATGTGCTGATGGAGTACAGACTGAGGAGTGTATCGACGGGTTCTAGTCTGAACAGCTTGTCAATGAGCTCCACAGGCTTCTCCTCTACAACGCCCAGATTGCTAAGCAGCAGTGACCGATACTCAAGTAGTCTGTCAGGTCCCTCCAGGTATTACAAATGACAATCGCAAGATGTGACACCTCCATCTTGTCATTCCTCTGTGTGCATCAGTCATGACTGTGCAGGAGTTGAAAACTTTGATTTTGTGTAAATGTATATGCTTttagacagttttttttttatattacttaGTAGTCTTCTTTTTATGTTTAACTTCTTTAGAATATGGGAAGATTTATAACTTTGAAGGTTTTACACAATTACTTGTGCATGTTTTCAGCAGCTTTACCTGAACATGAGTGTATGGCCATTGTTAATTTCCTAAGGCCCTGTTCTATTAAAAGTAATGGAGAAATTGA
>XM_039806828.1
TAAATTTCGTCTGTTTAAAACTGGCAAAATAACTGCTTCCTATTCTCTCCCATATCCCTCCGAATCGGCTTTGTTTTTTCTCATCATAGCGAATGTGTTCTGCCGACCTTGCGCTTTGAGGAACCCGCAGTTTGCATTAAAACATCTCGGTGGAGAAACAAGAAATGGAGGCTCATGCTTCAGCCAACCAGCTTCCACCTAAAAATGGGCCGCAGTCTAATCAAAGGAGAAATGCCAGGAGAAAGCAGCTGCAGCATTCTGCTGATATAGTATTTACCAAAGGGACATCTATCCAGACCATTCCCTCTCTTAGCAAACTCTTGAAAGGGGTAACGGAGTGTGTCATTGGTCTTCAGTATGTGTGGGAGTACCGCAGCCCCAGTAAATCTGTCCCACCACACTACCAGTGCAAACTCTGTGCTGTCTCCCGCTTGCAGCATGATATGCTTGCCCACGTGAAAGGCTGGAAACACAGCTTCAAATACCTGAAAAAGGTCCACCCTAACAAGGTCACCAATGAAGAGGAAGAGGCCATCAGAGACCCTGCTGTAAGGAAGAAAATTAAAGAAGTTTCAGCTGAGGTGGAGAAGACCGAGGGGAGGGGACAACTCAAGGTGATTCTGAAGGAGCCCTGTGAAGTACTAGCTTTCAAAGGACTCCGTTCTGCTGCTCCTAAAGTTTTGCCTACACCAGGACCAGGGATGGGACTAAAGGGACCACCCTTTGgTCTCTCAGGTCCCAAGTTCTCTGACCAGAGGTTTCTAGGGGAGTTTCCTCCTCAGAATGGTCCTCTCTCTAACTATCCAGTGGGAGACTATGGGGAGTCCGGCTTCGGAGGCTATGATTACTCGACCAGGCAAGATTTCCATGACTCTGGTATGGATCGAAGACCTTTCCCAGATGGTATGGGTAATCGCCCAGCTGGGATTGGAGATGGTTTTGGATCAGGTGGTGGAAGAGATGGCTATGGAAGGAGTGGACTACTGGATGACAACCCAGGCAGAATGTATCCTGATGAGTACCGGGACAGCCAAATGGGGAGTAGCTTAATGGACAGACCAATGGACAAGCCACTGGAGAGGCCAGGCTTGATGGGAGCAGCTCCAGAAAGTAGCAGCCTTCCTAACACACTACTTACTTACCTGGATACTTTCCGGATAGAGAGCGAGAGTGACGCACAGCTGGTGCTGAAGGTGACACAGAAACTTACAGATGTGCTGATGGAGTACAGACTGAGGAGTGTATCGACGGGTTCTAGTCTGAACAGCTTGTCAATGAGCTCCACAGGCTTCTCCTCTACAACGCCCAGATTGCTAAGCAGCAGTGACCGATACTCAAGTAGTCTGTCAGGTCCCTCCAGGTATTACAAATGACAATCGCAAGATGTGACACCTCCATCTTGTCATTCCTCTGTGTGCATCAGTCATGACTGTGCAGGAGTTGAAAACTTTGATTTTGTGTAAATGTATATGCTTttagacagttttttttttatattacttaGTAGTCTTCTTTTTATGTTTAACTTCTTTAGAATATGGGAAGATTTATAACTTTGAAGGTTTTACACAATTACTTGTGCATGTTTTCAGCAGCTTTACCTGAACATGAGTGTATGGCCATTGTTAATTTCCTAAGGCCCTGTTCTATTAAAAGTAATGGAGAAATTGA

Function

NR:

description
uncharacterized protein LOC110535723

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806827.1 True 1765 mRNA 0.46 12 21161670 21167686
XM_039806828.1 False 1671 mRNA 0.46 12 21161676 21167686

Neighbor

gene id symbol gene type direction distance location
invs LOC102794544 coding upstream 10157 21129350 ~ 21151513 (+)
stx17 stx17,LOC102795111 coding upstream 44577 21106838 ~ 21117093 (+)
nr4a3 nr4a3 coding upstream 58069 21080886 ~ 21103601 (+)
LOC120562142 NA coding upstream 160028 21000271 ~ 21001642 (+)
galnt1 galnt1 coding upstream 201013 20903853 ~ 20960657 (+)
tmem67 tmem67 coding downstream 4837 21172523 ~ 21183348 (+)
pdp1 pdp1 coding downstream 16265 21183951 ~ 21190820 (+)
rnf41l LOC102792600,LOC102077802,LOC102303797,LOC101478352,LOC102199951,LOC103373185 coding downstream 67501 21235187 ~ 21240428 (+)
esrp1 esrp1 coding downstream 89039 21256725 ~ 21268854 (+)
sgk2b NA coding downstream 141192 21308878 ~ 21312066 (+)
G74234 NA non-coding upstream 4758 21101170 ~ 21156912 (+)
G74233 NA non-coding upstream 9158 21150389 ~ 21152512 (+)
G74207 NA non-coding upstream 267728 20893139 ~ 20893942 (+)
G74208 NA non-coding upstream 269015 20891684 ~ 20892655 (+)
G74205 NA non-coding upstream 319901 20840560 ~ 20841769 (+)
G74274 kiaa1429,LOC104941925 non-coding downstream 75543 21243229 ~ 21243567 (+)
G74286 NA non-coding downstream 121485 21289171 ~ 21289375 (+)
G74287 NA non-coding downstream 121867 21289553 ~ 21290314 (+)
G74288 NA non-coding downstream 123356 21291042 ~ 21292380 (+)
LOC120562851 NA non-coding downstream 557262 21724948 ~ 21725705 (+)
sec61b sec61b,LOC102796100 other upstream 150256 21008013 ~ 21011414 (+)
glipr2l glipr2 other upstream 556505 20600323 ~ 20605165 (+)
gra NA other upstream 835709 20322330 ~ 20325961 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other upstream 934679 20214588 ~ 20226991 (+)
LOC120561838 tppp other upstream 952343 20192690 ~ 20209327 (+)
LOC120563169 NA other downstream 163726 21331412 ~ 21336665 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other downstream 235349 21403035 ~ 21415894 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other downstream 431348 21599034 ~ 21603458 (+)
G74633 tuft1,LOC102781808 other downstream 601862 21769548 ~ 21770286 (+)
slc50a1 slc50a1 other downstream 915983 22083669 ~ 22091963 (+)

Expression


Co-expression Network