LOC120562939


Basic Information

Item Value
gene id LOC120562939
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 16726348 ~ 16729348 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806894.1
CTTCTTGCAAAGCTAACTTGTGGAAAGCGAACTCTTTGAGTTTTAAACCGCTTGAGACAAACTACTGGAAAACGGATCttgttgaaaaaacaaatctaCTGAATCACTCAACTGTTGTGGGAAACCGGAGAGCTTGAACATGGCCCTCTGTCGTCTACCTGAGGAGCACCTGCTGATGGGAGTCGCCCAGTTGGACATCCGTggagGTGGTGTAAACCCCTTCATTGAGCGTCCTGCAGAACATGGCCTCCCTGAAGATGAAGGTGAGTATGAGGAAGGTGAGTATGAGATTGTTGTTGTAGATGAAGTTGAgctctttctccccctctcctcgGGCGAAGAAGATGACAATCAACTGGTGGACACCGAACAGGATGAGGATGAAGACACAGGTGATGAGAACGACTGGTCTGACAGTGTCAGCGAAGATTCCGGGTATGACTCCCTGTCTGAAGATGAAGAGGATGAAGAGGTCGTTGAAGAGGATGTTGAAGAGGATGTTGAAGAGGATGTTGAAGAGGATGTTGAAGAGGATGTTAAAGACGATGTTGAAAAGGATGTTAAAGACGATGACGATGGCAACATCCGAACTTGCTCCCCTCTCATCCAGCAGTTCCTACCTCCAAGCTTTTGGCAGGGATGGGAACAAGTGTCTATCCCTGTTCCCTCTGGCGCTTTTCTCTGGCCCCGCACTTTTGATGTTCAGCATCAGGAGATTCCTGCGCAGCAAGTGGAACGTACTGAAGACGGTCTACCCTCAGCCTCTCAAAGGTCAGAAGAGTCTGCTCCTTCAACCTCAGGCCTCGGCTCCTCCACGAAGAGGAGCAGGGAAGAGAGCGACACGGTGCAGGTAAGTATGAAGAGGCAGAAGTGGAATTGTGAGGACCGCCATGACGAGTCAGCGCCCTCGAATTCAGGCCTCGGCTCCTCCACGAAGAGGAGCAGGGAAGAGAGCGACACAGGGGAGGTAAGTATGAAGAGGCAGAAGTGGAATTGTGAGGACAGCCATGACGAGTCAGCGCCCTCGACTTCAGGCTTCGGCTCCTCCACGAAGAGGAGCAGGGAAGAGAGCAACACAGAGGAGATAAGTATGAAGAGGCAGAAGTGGAATTGTGAGGATAGCCATGACGAGTCAGCGCCCTCGACTTCAGGCCTCGGCTCCTCCAGGAGCAGGGAAGACTACTGGTACTCAGCACCCTCAACTTCAGGCCTCGGTTCCTCCAGGAGCAGGGAAGACTACTGGTACTCAGCACCCTCAACTTCAGGCCTCGGTTCCTCCAGGAGCAGGGAAGACTACTGGTACTCAGCACCCTCAACTTCAGGGCTCGGCTCCTCCAGGAGCAGGGAAGACAGCTATTGGCACTCAGCACCCTCGACTTCAGGCCTCGGCTCCTCCAGGAGAAGGGAAGACTACTGGTACTCAGCACCCTCAACTTCAGGCCTCGGCTCCTCCAGGAGAAGGGAAGACTACTGGTACTCAGCACCCTCGACTTCAGGCCTCGGCTCCTCCAGGAGCAGGGAAGACAGCTACAGGGAGTCAGCACCCTCGACTTCAGGCCTCGGCTCCTCCCAATTCAGGAAATACAGGATAAGCCCTTTTGATTACCTGAGAGGAACTGAAGACAGCGACTCTGATTAGGACAGAGTTTGGGACTGTTTGCTGCAGGATTGGAAAACCTTTGCGTCTGGCAGGGCAGATAAATCCTCAGCTAGCATTTGCGTCTGGCAATGCTAACACAGCCTATGGTAGCGTCTTGCACCAGGGCCATTTGTACATATCTGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806894.1 True 1785 mRNA 0.53 2 16726348 16729348

Neighbor

gene id symbol gene type direction distance location
LOC120562690 NA coding upstream 1792 16721636 ~ 16724556 (+)
LOC120562688 tnfrsf11b,LOC103369092 coding upstream 7824 16632876 ~ 16718524 (+)
mboat1 mboat1 coding upstream 217607 16495726 ~ 16508741 (+)
LOC120563110 dcdc2,LOC102296430,LOC102788673 coding upstream 1018846 15682419 ~ 15707502 (+)
slc6a3 slc6a3 coding upstream 1051126 15657241 ~ 15675222 (+)
LOC120562315 NA coding downstream 3284 16732632 ~ 16816257 (+)
LOC120563118 scgn,LOC103369094,LOC103151166,LOC106960462 coding downstream 87094 16816442 ~ 16831163 (+)
LOC120562165 nov coding downstream 116605 16845953 ~ 16850232 (+)
sntb1 sntb1 coding downstream 128675 16858023 ~ 16897965 (+)
LOC120561714 NA coding downstream 255263 16984611 ~ 16990597 (+)
G72801 NA non-coding upstream 231773 16494237 ~ 16494575 (+)
G72798 e2f3 non-coding upstream 235967 16489593 ~ 16490381 (+)
G72797 NA non-coding upstream 240429 16485713 ~ 16485919 (+)
G72796 NA non-coding upstream 243850 16482255 ~ 16482498 (+)
G72795 e2f3 non-coding upstream 244416 16480679 ~ 16481932 (+)
G72852 NA non-coding downstream 1489 16730837 ~ 16731044 (+)
G72859 NA non-coding downstream 230440 16959788 ~ 16962840 (+)
G72879 NA non-coding downstream 262368 16991716 ~ 16991989 (+)
G72862 NA non-coding downstream 336241 17065589 ~ 17065911 (+)
trnar-acg_16 NA non-coding downstream 639355 17368703 ~ 17368775 (+)
G72750 LOC104952694,LOC106925895 other upstream 654147 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1166056 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2093627 14626478 ~ 14632721 (+)
G72506 NA other upstream 2300168 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 2356257 14175817 ~ 14370091 (+)
G73031 LOC103366415 other downstream 720237 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 727295 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 916165 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 1021582 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 1669708 18399056 ~ 18420721 (+)

Expression


Co-expression Network