LOC120562942


Basic Information

Item Value
gene id LOC120562942
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29743009 ~ 29745181 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806898.1
AGCCAACTCAGTCTTGTCAGGTCACTTCCTTACGTAGGAGGTGATTAAATTGTGATTAGTCGTGATTAACTCATCCTCTGGAGCTATAAAAGCCTCCGGCTCTCTGACAGAAGGCACCATCAGGTCAGAGAACCCCAGGAGTGAAGGTCTGTCTTGCTCATCTGCAGCCATGAAATTCTCCCTCGTTGCCGCTCTTGTTGTTGTGCTGGCTGTTGCCTATgGCACTGAGGCCGGGTCAGTGGTGAAGCGTGATGCCGAGACTGATTTGGAGAAGCTCACCCAGCTCATCAATGACATGTCTGCCAGCATCACCGGCGCCACTCAGGACATGGTGGAGAAGGTGAAGGCTCTGGAGGTGACCAACACTGCCcaGACTTACATTGAGGACAGCAGGGCTCAGATCCAGCCTCTGGTTGATAAGGTCCAGGCCGAGGCCGCCAAGCTGCAGGAGCAGGTCAAGCCCTTCATCGCCAACATTGAGGATCAGATCAAGCCTCTGACCGACAACTTCCAGGCCCAGGTCAGGCCTCTGACCGACAACTTCCAGGCCCAGGTCCAGCCTCTGACCGACATGATGGAGAAGTTCTTCCAGCAGGTGATGGACCAGACCAAGGCCCTGCTCCCCCCCAGTAAAGCTTGATGTTGGTTCATTCCAGCTGCAATAACGCTCCCGTTTTGGTTCTGTCTCCAAGTTACCTGAGATGTGATGGCTAAATGTTATCAATAAAGGTGTTTGAAAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806898.1 True 743 mRNA 0.53 4 29743009 29745181

Neighbor

gene id symbol gene type direction distance location
LOC120562990 NA coding upstream 381884 29355633 ~ 29361125 (+)
LOC120562792 NA coding upstream 387467 29352141 ~ 29355542 (+)
LOC120562836 NA coding upstream 394186 29339254 ~ 29348823 (+)
LOC120562877 LOC103362365,LOC104932167,LOC104967986 coding upstream 404035 29337456 ~ 29338974 (+)
LOC120562725 NA coding upstream 574078 29163561 ~ 29168931 (+)
ntrk1 NA coding downstream 34998 29780179 ~ 29811789 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding downstream 380745 30125926 ~ 30133536 (+)
LOC120561633 NA coding downstream 391100 30136281 ~ 30137569 (+)
tap1 tap1 coding downstream 424833 30170014 ~ 30182142 (+)
brd2b LOC104928643,LOC103356858 coding downstream 441165 30186346 ~ 30205056 (+)
G77114 bola1 non-coding upstream 158009 29582757 ~ 29585000 (+)
G77097 NA non-coding upstream 277457 29464612 ~ 29465552 (+)
G77033 NA non-coding upstream 303835 29433160 ~ 29439174 (+)
LOC120562102 NA non-coding upstream 318806 29413259 ~ 29424203 (+)
G77014 NA non-coding upstream 377579 29363233 ~ 29365430 (+)
G77172 NA non-coding downstream 67750 29812931 ~ 29813541 (+)
G77198 LOC103388947,LOC102796900,LOC101464846 non-coding downstream 149053 29894234 ~ 29898753 (+)
LOC120562092 NA non-coding downstream 372827 30118008 ~ 30121096 (+)
LOC120562235 NA non-coding downstream 471567 30216748 ~ 30218603 (+)
G77260 NA non-coding downstream 653095 30398276 ~ 30402704 (+)
G77028 LOC104942601 other upstream 330596 29404008 ~ 29412413 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other upstream 352956 29384135 ~ 29390053 (+)
G77009 ubqln4 other upstream 412751 29328789 ~ 29330258 (+)
mex3a mex3a other upstream 454461 29276147 ~ 29288548 (+)
pear1 LOC104932170 other upstream 498917 29179830 ~ 29244092 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other downstream 328756 30073937 ~ 30109545 (+)
G77239 NA other downstream 378521 30123702 ~ 30124638 (+)
LOC120562443 NA other downstream 606314 30351495 ~ 30360588 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other downstream 942157 30687338 ~ 30731609 (+)
G77447 NA other downstream 1389648 31134829 ~ 31136146 (+)

Expression


Co-expression Network