LOC120562948


Basic Information

Item Value
gene id LOC120562948
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37682235 ~ 37685613 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806908.1
ACTGGGAAAATGAAGCTCCGCCCCTCACAAGACTCACCGGAGATAAAACAGGGaagcaggcgcacacacacaaccactacTTCTACTGAGAGAGAACAGCTACAGGAAGGAGTTCTGGGACTTCAACCAGCTGCTGAAACCACAAAGTGAACGTGAGTTTTATAAGAACAAAGACTCAAAGTGAAAGTAACTTTCGGGAGAAGTTGAAGTGGCTGAGCTGTCAGCCTGCTGTGTTGGAGCCTGCTGTGTTTCCGTCTTCACTCAGAGACTAAATGGCTTCCAGATCAGAGCAGGAGCTCTGCTGTCCGGTCTGTCAAGACATCTTTAGAGATCCTGTTGTTCTGGTGtgtagccacagcttctgtaaagAATGTCTGCAGGGCTGgcggagagagaaacagacacaggaGTGTCCAGTTTGTAGGAAAAGATCCTTGTCTAAACCACATTTTAGCCTGGTGTTGAAGAACCTGTGTGAGGCCTTCATACAGGAGAGAGATCAGAGATCTTCAgaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcagccGGTGTGTCTCGTCTGCAGAGATTCAGAAACCCACACCAACCACAGATTCAGACCCATCGATGAAGCTGCACGACAACACAAGAAGGACCTTCAGGAAACTCTGGAGCCCTTAAAGGAGAAGTTAAAGGTTTTTGAACGAGTAAAAGAGGTGTGTGATAAAACAGCAAAAGTCATAAATGTCCAGTCGCGACGCACAGAGATGGAGATTAAGGATCAGTTTACGACGCTTCACCAGTTTCTAAAACATGAAGAGGAGGTCAGGATTGCTGCactgagagaggaagaggagcagaaaagtcagaggatgaaggagaagatggaggctctgagcagagagatagcagctctttcagacacagtcagagtcacagaggagcagctgagagccAAAGATGTCTCATTCCTGATCAGctacaaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgctctcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacGAGGTCTCCTACACTCCTGTGATcctggacccaaacactgctATGTCAGACTTCATCCTGTCTGATGAACTGACCAGTGTGAGAAAACTAAAGAGATGGGGAGGGAAACTGCAACTTCCTGGTAATCCTGAGAGGTTGGATTGTGACTACAAAGgtgtcctgggctctgagggctttgactcagggactcacagctgggatgTCAAGGTCGGAAACAGTACATTCTGGGAACtgggtgtgttagcagagtctgtccagaggaagggagacaTTCAGTCTGGAATATGGAGCATAGTGTTCAAAGAAGGTGAATACTCAGCACGGTCACTACCAGATCCAGAAACCGATCTCGAGCCGGACACGCCGCCCCGGAGGATCCGAGTGACTCTGGACTGGGACGGAGGAAAGCTGTCGTTCTATGATCTTtgtactaacacacacatacacaccttcacacacactttcactgagaagCTGTTTCCATTGATTGACACTGAGgagcacatatttgttttaCCACTGAAGGTCTGTGTGACTGTAGAACAGATTAATGATTATGATGGTCATGGTGGTTATGAGGATTATGATGGTAATGAggatggtggtgatgatgatgattatcaTTTAATTATgggttaaaaaaagagaaaggtagagagaaggggaatgacatgcaacaaagggccgcaggtcgtaGTCAAACCTGAaaccgctgcgtcgaggagtaaacctctatacatgggcaTCCGCTCCACCAGAAGAGCTAACCAGGGGCCCAGACATCAGAAATACAGAATAACAATTGGCCCGATTTTTATATAACTTGGTGGAAGAGTGTAGCATGGACTGAGaaaaacccattacattttgatcTGAATCACGGggcggatacacaaattatttctgCATTAACATTGCGAGCTAcagtgtttttgttgcattCAGGTGGTGTAGGAATTATTGGAAAAACTAGTTCCTGACTGGGACTAAACTTATAAAGAAATACTTAGTGTCGATTGTTGCTAAGTTATTCATCTTGGCAACAAGATatgtggagttccccaaggctcaagCCTCGGCCCgcttattttacatttacatgctTCCATTAGGCCAAATTATACAAACCAACATCAACTATGCAGACGACAAATTTGGCTCTTTAAGGATaaggttgtttttgttaatgtcAAAGTTTATTCTTTTGAACCGACCTATCAGTACATTCATTGAGTTTAGAAGatatgcttgctcttgggggaattattggaattgttgggtctatgtaaattatagagtgtggtctagacttattctatctgtaaagtgagagataactcctgttatgatttcatactattacaatacaattgaattgaaaataaagatatattcagtTGTACAGTTATATTCTcttggtttttattttcttaatctcTTGGCAGTTTAATGacctgttgtgtgttgtgttgtactTTGTCtcaatattttaatgtttaatgtaacaTAAAACATAGCATTTTAAATGGCCTTGTTGTTGAAATGTGCCTGGCCATGTTCCaaattttgtgtttatttagtaACATGTTTCAGATATCTATTACCAATGTAACATAATCAGAATTAATAACTCCTGTTTCTGAATTATAATACCTGTCAATGaagctgtgattggtttacCATTAGATCATTGACTATACCTTTAACACCCTGCAGTGTTATCTTAAAAGTTTCTACATACCAGTAAAACTACTCTGTATCTCACTCTGTTAACATGTCAACAAACCACATGGCTCCACAACACAGAcagcgctgtaacgtgaacatGATGTGTTGTAAGAAttgttttggtgtttggtggaggGTTAAAGTGATCCTGAtttgtttattgatttaaaatgttaaattgatGTTATCATGATATGTTTGTAATTCCTCTTGTGTTTCTGTGCTGCTGAGAAtgagattacatttttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806908.1 True 3097 mRNA 0.43 2 37682235 37685613

Neighbor

gene id symbol gene type direction distance location
LOC120562949 NA coding downstream 7222 37672821 ~ 37675013 (-)
LOC120562467 NA coding downstream 39344 37640039 ~ 37642891 (-)
LOC120561711 NA coding downstream 50156 37629707 ~ 37632079 (-)
LOC120562466 NA coding downstream 82588 37592760 ~ 37599647 (-)
LOC120562909 NA coding downstream 128446 37532965 ~ 37553789 (-)
LOC120562468 NA coding upstream 8104 37693717 ~ 37695406 (-)
mrps12 mrps12 coding upstream 39976 37725589 ~ 37730066 (-)
si:dkey-11p23.7 NA coding upstream 165548 37851161 ~ 37854822 (-)
LOC120563013 NA coding upstream 526207 38211820 ~ 38230481 (-)
dcst1 NA coding upstream 543945 38229558 ~ 38250551 (-)
G79419 NA non-coding downstream 22916 37658532 ~ 37659319 (-)
G79241 NA non-coding downstream 131994 37516756 ~ 37550241 (-)
G79431 NA non-coding upstream 46158 37731771 ~ 37732474 (-)
G79441 NA non-coding upstream 72588 37758201 ~ 37758821 (-)
G79443 NA non-coding upstream 93751 37779364 ~ 37831558 (-)
G79433 NA non-coding upstream 111203 37796816 ~ 37797945 (-)
G79448 NA non-coding upstream 141211 37826824 ~ 37866047 (-)
LOC120561551 NA other downstream 162841 37492800 ~ 37519394 (-)
LOC120562574 NA other downstream 447106 37088824 ~ 37235129 (-)
kiaa0319 LOC103370079 other downstream 787597 36867667 ~ 36894638 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other downstream 933997 36664542 ~ 36748238 (-)
creb3l4 NA other downstream 1322655 36339081 ~ 36359580 (-)
LOC120562472 NA other upstream 58471 37744084 ~ 37796766 (-)
LOC120562474 NA other upstream 272836 37958449 ~ 37971348 (-)
G79484 NA other upstream 378085 38063698 ~ 38221760 (-)
LOC120562477 NA other upstream 454856 38140469 ~ 38205182 (-)
LOC120562482 NA other upstream 633331 38318944 ~ 38324284 (-)

Expression


Co-expression Network