LOC120562954 (LOC103375369)


Basic Information

Item Value
gene id LOC120562954
gene name LOC103375369
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 28347610 ~ 28354162 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806915.1
CTTGCATAACTGAGATGACCCACATACATTGACTGATATGAACAATTAAGAATCCGTGGCAGGCAGAAATGTTAATCATTAATCAGTTGTATTCAACTTTCTATGGAACTTTTATCACTATTACATTTGCCACACTGTAATATGTTTGGTTTGTGTAGACAAAAGGAATCAGACATAAACACATTTAGTTGTTGGAGCCTTTGAGGAAATGGCCAACAGCATGAGAGTGACTCACCCTTTGTCATGTGTTGTCTCACAGATACTTGCTGAGGTCTTTTTTCCCCAAACAATTCCTAGTTCCACCACTTGAATTAGTATTTGAATCTTTTGGCATGCTTAAATAATTTGAAAGTTGTAAACCTAACATTGCTGATTGCAAAATGAGCTCAGTGGTATGTATGCAATGAATGTATGTAATACTCAAAGATAATGGATATTGGAAGAGTAAGAGGAAGCATTAAAGTGAAGTCCTAGTACAAGGAGCACAATGAAACACTCCAACTTCCCCCTCTTTGCTCCTCTCTTCATCCTCACCTCTGTCTGTGCTGGCAGAGCAGGGTTGCAGTCATGCATGTGGACACTGTCTTTCTTGTGTGTCCTCTGATTTTTGCAGCAGCCCTGTGGAGGAGGGTCCAGGCTGTCTCCCCTGTGCCCTCAGTCCCAGACCATGTCCAAGCCCTGGTGGGCTCCTGTGTGGTGATTCCCTGTTCTTTCACTCCTCTAGCTCCTCATCCTCTCcgggggaggaaggagagggtgGATGTACGTCTGCGGTTCAGAGGTGGTGGTCGCTTCTTCCCTCTCCGCAGCACCGCTTTTAACAGCGAGGACAGAGATCAAGTGAGCCGGGATTTCCAAGGCCGGACGTCCCTCTTTGGGAAAATCCCAGATGGAGACTGCTCAGTGAAGATCGAAAGGATCAGCCAGGATGACTCACGGGAGTTTGAGATCGCTCTGAAGAGAGGTGATGACTTACTTTGGGGGCGGCCAGTGAGCTTCAATCTGGATGTTGTGGACACCCCTGAGGCTCCTGTCATCAGCGGCATGTTGTCAGCCACAGAGGGACAGCTGGTCACCCTGAACTGCTCCGTCAGCTTTCACTGCCCCTCCAGACCTCCTTCCCTGCAGTGGAGCTGGGAGAGAGGAGCCCAGCTGAACAGCACTAGGCCAGGGGAGGTACAGACACTCCACCCAGAGCCCCACAGGCCAATGTTACTGGCCTCTCTGTCCTTTAAGGTGTCTCACCAGGTGAAACCCAGGATCAAATGTGAAGTCAGTTACCCAGGAGCCAAAGCATTGGCCATTTCGAAGGATCTTCATGTGACATTTTCACCAAAAGATGTAACGGTTCAGGTCCAGTCCTTGATAGTGCAGGAGGGGGGCAACGCCTTGTTGGTCTGCTCATGTAAAGCTGACCCTCCGGTGTCTGAGTACCACTGGTCCTACAGTCAACACGGCCGCACGGTGCACCTCCACCAGCGCACACACGCAGTCCGGCTGTTCAACGTGACCCGAGACATGAGGGTCCGCTGCTCGGCACAGAACCAGATTGGTCGAGGAGAGTCCCGGCCCACACTGCTGAACATACAATATAAACCGATCATTCTCCATCTGTCCTCAATCTGTTTTGTGGAGGATCAGAAGGTGCTGTGTCGCTGTTCAGTCAACTCCAACCCCAAACCAGCAGTTACCTGGAGCGTGAATGGTACTATCCCACCTCGTGATTACAACGTGTCGGTAACATCTGAGCTCGACACGCTAACAGCTACTCTGAGGGGCCGCATGGACAAACCTCAGACTGTGATCTGCTTTGCTTTCAACGCAATGGGAAATGACTCCCTGGTGTTGCTGCAGGGAGGTGAAGAGATGGCACCTTTGCTGTGGATGGTGATACCTGCTGTGTCCATTTGCTTGGTCATAttccttctgtctctttttttctactgttgCCGAAAGAGAGCTGGAAAACATGTCCTGAGTAGACGCCCAGCCGTGTACCCTGGAGGATTAGGAATTTATCAGGATCGGATGCCCCTCTACGTTAACTGCACAGAAGTTACCCATATCTACACCAACGGCAGTTACCAACTTGTATACCAGAACTGCACACCTCTTTTTGTCCATACTAAGCAGatccGTCCAATTGGCAGACGAGGtggggagagaagaagaagagatggagagggTGGAGGAATAGACAGACGAGCGGCTTTGGGAGTCAGAGGCACGAGAGAGGTGCAGAGCACTGCTGTGGGCGACGCAGAGACGGCCATATATTTGGAGATCCTCTGAGCCCACTGTTCTACTGCTACATTAAACTTACATTAGACTTCAGATTCTTTCTCACACTGATGGTAATGCATAGTTAATGTAACTTCCAGttattgtatatactgtacatgcattaTGTGATCTCTTGAATAACTACTGTTGGTCTGTCACTCTCCAAATTTCCATATTAAGCAATTTCTATCTCTGTTCGCATTTAACCTTCCTCTGTGctcttttttttggtttatttttaaacatgaaaAGGTTTGATAAGAGTTTTTCATCTTGTGTCTATTCTACAACCCACACAATCACTCAAATTTGATTTGGTCTTACCAGTCTACTGCTGCTCCAAACACATTTTCAACAACAGCTGCAGCATGTCTAACACAAAGTGATCCTCAGACGGTGTTTTAAAGTTCCTTTACATAACATAAGTTATAAGTGAGGAAGTGTATCACAGTGCTCATGAGAGAATATGTCATGTCATttcaggaaaagcacagctctaatgataaataataataataataataataataataataataataataagcatcCCAgtaaatttgaactttttagtAGTTTTTCACACAAAATAGCACAAGCAAATGTTTACAGAAGTGATATTTACTGTGACtgcagaggaagaaaaaaaatattaaagaaagaaaaaatactgggaATCAACCCACAAAGTCCATCCAAAAGCTACTACTATCAATATATAAATGATTGCAGTCTAACTTTCACATCCATTTACATATATAATTCAACTGTTTAAgtagatgtttaaatgtttCGTGGTTAAGGGCATTTACATAGTTTGAGTTTAAGTTGTTTAAGTTTAAGTTGAGTTTTGAGTTTAAGTCTGTGCTTTAAGTGCACTGATGTGCTGATGCAAAATACATTTATGTACACTGGCCTATTGTAGTCTATATAGCTTTCTTATTTTGGTTTATttcgtttagtttttttttctacttactCCTGTACTAATTGTGAAGATGTACCTTTcctatttgtttttcatttgctttgtttttattgtctttatctggtttgtgTTTGGTGCTTCTATATGACACCCACTAGGGATGAATACAGTGTTATCTGATTTCTAGAAATAAAAGATTAGAGAACGCT
>XM_039806916.1
TGCATAACTGAGATGACCCACATACATTGACTGATATGAACAATTAAGAATCCGTGGCAGGCAGAAATGTTAATCATTAATCAGTTGTATTCAACTTTCTATGGAACTTTTATCACTATTACATTTGCCACACTGTAATATGTTTGGTTTGTGTAGACAAAAGGAATCAGACATAAACACATTTAGTTGTTGGAGCCTTTGAGGAAATGGCCAACAGCATGAGAGTGACTCACCCTTTGTCATGTGTTGTCTCACAGATACTTGCTGAGGTCTTTTTTCCCCAAACAATTCCTAGTTCCACCACTTGAATTAGTATTTGAATCTTTTGGCATGCTTAAATAATTTGAAAGTTGTAAACCTAACATTGCTGATTGCAAAATGAGCTCAGTGGTATGTATGCAATGAATGTATGTAATACTCAAAGATAATGGATATTGGAAGAGTAAGAGGAAGCATTAAAGTGAAGTCCTAGTACAAGGAGCACAATGAAACACTCCAACTTCCCCCTCTTTGCTCCTCTCTTCATCCTCACCTCTGTCTGTGCTGGCAGAGCAGGGTTGCAGTCATGCATGTGGACACTGTCTTTCTTGTGTGTCCTCTGATTTTTGCAGCCCTGTGGAGGAGGGTCCAGGCTGTCTCCCCTGTGCCCTCAGTCCCAGACCATGTCCAAGCCCTGGTGGGCTCCTGTGTGGTGATTCCCTGTTCTTTCACTCCTCTAGCTCCTCATCCTCTCcgggggaggaaggagagggtgGATGTACGTCTGCGGTTCAGAGGTGGTGGTCGCTTCTTCCCTCTCCGCAGCACCGCTTTTAACAGCGAGGACAGAGATCAAGTGAGCCGGGATTTCCAAGGCCGGACGTCCCTCTTTGGGAAAATCCCAGATGGAGACTGCTCAGTGAAGATCGAAAGGATCAGCCAGGATGACTCACGGGAGTTTGAGATCGCTCTGAAGAGAGGTGATGACTTACTTTGGGGGCGGCCAGTGAGCTTCAATCTGGATGTTGTGGACACCCCTGAGGCTCCTGTCATCAGCGGCATGTTGTCAGCCACAGAGGGACAGCTGGTCACCCTGAACTGCTCCGTCAGCTTTCACTGCCCCTCCAGACCTCCTTCCCTGCAGTGGAGCTGGGAGAGAGGAGCCCAGCTGAACAGCACTAGGCCAGGGGAGGTACAGACACTCCACCCAGAGCCCCACAGGCCAATGTTACTGGCCTCTCTGTCCTTTAAGGTGTCTCACCAGGTGAAACCCAGGATCAAATGTGAAGTCAGTTACCCAGGAGCCAAAGCATTGGCCATTTCGAAGGATCTTCATGTGACATTTTCACCAAAAGATGTAACGGTTCAGGTCCAGTCCTTGATAGTGCAGGAGGGGGGCAACGCCTTGTTGGTCTGCTCATGTAAAGCTGACCCTCCGGTGTCTGAGTACCACTGGTCCTACAGTCAACACGGCCGCACGGTGCACCTCCACCAGCGCACACACGCAGTCCGGCTGTTCAACGTGACCCGAGACATGAGGGTCCGCTGCTCGGCACAGAACCAGATTGGTCGAGGAGAGTCCCGGCCCACACTGCTGAACATACAATATAAACCGATCATTCTCCATCTGTCCTCAATCTGTTTTGTGGAGGATCAGAAGGTGCTGTGTCGCTGTTCAGTCAACTCCAACCCCAAACCAGCAGTTACCTGGAGCGTGAATGGTACTATCCCACCTCGTGATTACAACGTGTCGGTAACATCTGAGCTCGACACGCTAACAGCTACTCTGAGGGGCCGCATGGACAAACCTCAGACTGTGATCTGCTTTGCTTTCAACGCAATGGGAAATGACTCCCTGGTGTTGCTGCAGGGAGGTGAAGAGATGGCACCTTTGCTGTGGATGGTGATACCTGCTGTGTCCATTTGCTTGGTCATAttccttctgtctctttttttctactgttgCCGAAAGAGAGCTGGAAAACATGTCCTGAGTAGACGCCCAGCCGTGTACCCTGGAGGATTAGGAATTTATCAGGATCGGATGCCCCTCTACGTTAACTGCACAGAAGTTACCCATATCTACACCAACGGCAGTTACCAACTTGTATACCAGAACTGCACACCTCTTTTTGTCCATACTAAGCAGatccGTCCAATTGGCAGACGAGGtggggagagaagaagaagagatggagagggTGGAGGAATAGACAGACGAGCGGCTTTGGGAGTCAGAGGCACGAGAGAGGTGCAGAGCACTGCTGTGGGCGACGCAGAGACGGCCATATATTTGGAGATCCTCTGAGCCCACTGTTCTACTGCTACATTAAACTTACATTAGACTTCAGATTCTTTCTCACACTGATGGTAATGCATAGTTAATGTAACTTCCAGttattgtatatactgtacatgcattaTGTGATCTCTTGAATAACTACTGTTGGTCTGTCACTCTCCAAATTTCCATATTAAGCAATTTCTATCTCTGTTCGCATTTAACCTTCCTCTGTGctcttttttttggtttatttttaaacatgaaaAGGTTTGATAAGAGTTTTTCATCTTGTGTCTATTCTACAACCCACACAATCACTCAAATTTGATTTGGTCTTACCAGTCTACTGCTGCTCCAAACACATTTTCAACAACAGCTGCAGCATGTCTAACACAAAGTGATCCTCAGACGGTGTTTTAAAGTTCCTTTACATAACATAAGTTATAAGTGAGGAAGTGTATCACAGTGCTCATGAGAGAATATGTCATGTCATttcaggaaaagcacagctctaatgataaataataataataataataataataataataataataataagcatcCCAgtaaatttgaactttttagtAGTTTTTCACACAAAATAGCACAAGCAAATGTTTACAGAAGTGATATTTACTGTGACtgcagaggaagaaaaaaaatattaaagaaagaaaaaatactgggaATCAACCCACAAAGTCCATCCAAAAGCTACTACTATCAATATATAAATGATTGCAGTCTAACTTTCACATCCATTTACATATATAATTCAACTGTTTAAgtagatgtttaaatgtttCGTGGTTAAGGGCATTTACATAGTTTGAGTTTAAGTTGTTTAAGTTTAAGTTGAGTTTTGAGTTTAAGTCTGTGCTTTAAGTGCACTGATGTGCTGATGCAAAATACATTTATGTACACTGGCCTATTGTAGTCTATATAGCTTTCTTATTTTGGTTTATttcgtttagtttttttttctacttactCCTGTACTAATTGTGAAGATGTACCTTTcctatttgtttttcatttgctttgtttttattgtctttatctggtttgtgTTTGGTGCTTCTATATGACACCCACTAGGGATGAATACAGTGTTATCTGATTTCTAGAAATAAAAGATTAGAGAACGCT

Function

NR:

description
PREDICTED: sialoadhesin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806915.1 True 3420 mRNA 0.44 8 28347610 28354162
XM_039806916.1 False 3415 mRNA 0.44 8 28347612 28354162

Neighbor

gene id symbol gene type direction distance location
vsig10l NA coding upstream 68413 28274073 ~ 28279197 (+)
etfb etfb coding upstream 74774 28262867 ~ 28272836 (+)
LOC120562747 LOC103369304,LOC107379318,LOC104956022,LOC100707205,LOC107082966 coding upstream 270347 28074190 ~ 28077263 (+)
si:dkeyp-97a10.3 NA coding upstream 288450 28047643 ~ 28059160 (+)
pnrc2 pnrc2,LOC100697533,LOC104941893,LOC101487357 coding upstream 991777 27351851 ~ 27355833 (+)
xrcc1 xrcc1,LOC102793167 coding downstream 262 28354424 ~ 28379143 (+)
LOC120561728 LOC104950326 coding downstream 65679 28419841 ~ 28431428 (+)
ethe1 ethe1,LOC102793944 coding downstream 78160 28432322 ~ 28436934 (+)
phldb3 phldb3 coding downstream 86989 28441151 ~ 28471080 (+)
LOC120562546 NA coding downstream 118514 28472676 ~ 28482599 (+)
LOC120562953 NA non-coding upstream 818 28331919 ~ 28346792 (+)
G76608 NA non-coding upstream 55050 28292000 ~ 28292560 (+)
G76579 NA non-coding upstream 111271 28233612 ~ 28236339 (+)
G76510 NA non-coding upstream 408948 27934795 ~ 27938662 (+)
G76503 NA non-coding upstream 483875 27863449 ~ 27863735 (+)
LOC120563095 NA non-coding downstream 83053 28437215 ~ 28438360 (+)
G76705 NA non-coding downstream 179881 28534043 ~ 28534766 (+)
G76709 NA non-coding downstream 188436 28542598 ~ 28542841 (+)
G76710 NA non-coding downstream 190643 28544805 ~ 28545095 (+)
G76712 NA non-coding downstream 195946 28550108 ~ 28550378 (+)
lim2.5 lim2,LOC106582670,LOC106605161,LOC107379310,LOC100699404,LOC102215845,LOC103139272 other upstream 59833 28283276 ~ 28287777 (+)
G76581 LOC101157563,LOC103369309 other upstream 102449 28241783 ~ 28245161 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other upstream 320084 27984053 ~ 28027526 (+)
ago1 ago1,LOC102230823,LOC103367053,LOC107379324,LOC103388087,LOC107082980,LOC101466039,LOC104959479 other upstream 363896 27962690 ~ 27983714 (+)
G76511 NA other upstream 395030 27948883 ~ 27952580 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other downstream 33935 28388097 ~ 28415653 (+)
LOC120562434 NA other downstream 60356 28414518 ~ 28416755 (+)
G76707 NA other downstream 166537 28520699 ~ 28521622 (+)
G76714 NA other downstream 199410 28553572 ~ 28569866 (+)
LOC120562342 NA other downstream 446488 28800650 ~ 28835368 (+)

Expression


Co-expression Network