Gene
RNA
| Item | Value |
|---|---|
| gene id | seh1l |
| gene name | seh1l |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 4463437 ~ 4472667 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| seh1l | Predicted to enable structural molecule activity. Predicted to be involved in several processes, including attachment of mitotic spindle microtubules to kinetochore; cellular response to amino acid starvation; and positive regulation of TORC1 signaling. Predicted to act upstream of or within several processes, including chromosome segregation; mRNA transport; and protein transport. Predicted to be located in lysosomal membrane. Predicted to be part of Seh1-associated complex and nuclear pore outer ring. Predicted to colocalize with kinetochore. Orthologous to human SEH1L (SEH1 like nucleoporin). |
| description |
|---|
| nucleoporin seh1 |
| id | name | namespace |
|---|---|---|
| GO:0051225 | spindle assembly | biological_process |
| GO:0051298 | centrosome duplication | biological_process |
| GO:0005813 | centrosome | cellular_component |
| id | description |
|---|---|
| K14299 | SEH1; nucleoporin SEH1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039806964.1 | True | 1281 | mRNA | 0.53 | 9 | 4463437 | 4472667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120561648 | LOC106523394 | coding | upstream | 573379 | 3889015 ~ 3890058 (+) |
| ebag9 | ebag9 | coding | upstream | 590537 | 3854146 ~ 3872900 (+) |
| tent5aa | LOC104929946,LOC103354291,LOC100698511,LOC103388593 | coding | upstream | 959549 | 3499187 ~ 3503888 (+) |
| prss35 | prss35,LOC104949834 | coding | upstream | 1294263 | 3163016 ~ 3169174 (+) |
| prdm13 | prdm13,LOC102783984 | coding | upstream | 1616491 | 2840205 ~ 2846946 (+) |
| cep192 | cep192 | coding | downstream | 1339 | 4474006 ~ 4571309 (+) |
| LOC120562920 | mc5r,LOC101487483,LOC100693278,LOC102795483 | coding | downstream | 473691 | 4946358 ~ 5065673 (+) |
| LOC120562247 | NA | coding | downstream | 883140 | 5355807 ~ 5357294 (+) |
| LOC120561876 | NA | coding | downstream | 1340210 | 5812877 ~ 5814642 (+) |
| tsnare1 | tsnare1,LOC101472715 | coding | downstream | 2164185 | 6636852 ~ 6805600 (+) |
| G70589 | NA | non-coding | upstream | 79 | 4463098 ~ 4463358 (+) |
| G70582 | NA | non-coding | upstream | 9816 | 4445802 ~ 4453621 (+) |
| G70545 | NA | non-coding | upstream | 60004 | 4403196 ~ 4403433 (+) |
| G70544 | NA | non-coding | upstream | 60344 | 4402709 ~ 4403093 (+) |
| G70542 | NA | non-coding | upstream | 64890 | 4398302 ~ 4398547 (+) |
| G70663 | NA | non-coding | downstream | 213912 | 4686579 ~ 4686782 (+) |
| LOC120562257 | NA | non-coding | downstream | 231072 | 4703739 ~ 4706534 (+) |
| LOC120562258 | NA | non-coding | downstream | 240948 | 4713615 ~ 4714463 (+) |
| G70687 | NA | non-coding | downstream | 403926 | 4876593 ~ 4877027 (+) |
| G70688 | NA | non-coding | downstream | 405568 | 4878235 ~ 4878484 (+) |
| trnar-ucg_13 | NA | other | upstream | 350156 | 4113209 ~ 4113281 (+) |
| trnai-aau_22 | NA | other | upstream | 350513 | 4112851 ~ 4112924 (+) |
| trnar-ucg_12 | NA | other | upstream | 351202 | 4112163 ~ 4112235 (+) |
| trnai-aau_21 | NA | other | upstream | 351560 | 4111804 ~ 4111877 (+) |
| trnai-aau_20 | NA | other | upstream | 354708 | 4108656 ~ 4108729 (+) |
| G70654 | NA | other | downstream | 193117 | 4665784 ~ 4666106 (+) |
| LOC120562617 | ldlrad4 | other | downstream | 337721 | 4810388 ~ 4892057 (+) |
| LOC120562244 | zdhhc3,LOC103364625,LOC101488043,LOC107102987 | other | downstream | 863547 | 5336214 ~ 5467090 (+) |
| si:ch211-198c19.1 | NA | other | downstream | 1118532 | 5591199 ~ 5594900 (+) |
| G70894 | NA | other | downstream | 1487788 | 5960455 ~ 5960854 (+) |
