LOC120562990


Basic Information

Item Value
gene id LOC120562990
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29355633 ~ 29361125 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806985.1
tttgaagaaaaCAAACGTGCGACGGGAAGTTGCCTATCAGTTTGTTTGCTTCTACCTGAAATCACCATCGACAAACCAGACGGTCACAGTCATAACTCTGCAGCCACGGACCCAGATACAAGTGATTTACTCTTTTGAGACAGATACACTAACCCTTTGttcaacaaacacacacgtgtgtgttgCCACCTTTCCGTACCAATACAAGGTGTGAGTGATGACCATCGCATCTTTCAAAGACAAAGGAGTGACTGTGGCGGCTGACAGTAAGAGCATGTTACCGCCGCTGTGTCAGATCCTCAAGTCTCTTTGCTACAGTCCCATGTGCTGCTCAGTGTACAAGGGGCTGATGCAGACCAATGTGACTGCAGCTCTTGGGactataCAGATCATGGTGGGCCTGTTCAACATCGGACTGGTGCCAGGACGAACATACATGTATCCCAAGGATCTGACCAGCCTGGGAGTTGCTTACTGGCTGGGTGCTGTGTTCATCATAGCTGGAATCATGTCCATTCTTGCCGGCCGGTTGTCCTCCATTTGCTTGGTGGGCTTTGCTGTGTTTGTGAACATAGTCGGCTCTATCTTCGCCATTGTTGGCATTGCGCTGAATGCCAAAGATCTGGCAGATGCCCCTGCCATCAGGATTTGTGACCTGTACATTGGTCACAGTTATTATGGCGACTGCGAAAATGTGGCATATTATGTGCAGCGCTTGTTGACAACCATGGACATTACTATGATCGTTCTGGCTGTTcttcagctgtgtgtctgcatcAGCTTTGCTGTTCTGGGCATCAAGGCTGTGGTCAACAGACAGAAGGAAGAGGGTGATGTTGAAGATCAGCAGCAACAATTGAATGCAGTCCTCCTGACCAATCCTTGTGCCTAAAAACAATCCAACTAAGCACATGGAAGCATGACTATGAGGCATTTTAATACTTGTGCTTTTACACTCACTTTCTGAAAGTAATCAAACTGATTTATATCACATAAGGACACATTTTTCTGTGTTTAAGTTTGTTCTTTCTGCTTGTCAATAACTTTTTGAAGTTAACTTGATTcaataaaacattcaaaatgcTACAAAAATACCCTTAGAGACATTTCAGCTGTATTGGTAAAGCCAGATATTTTTAAAATCTCAGCAGATAACTATGTGCACCAAAAGGGGTAACTGAAAGTGTAGGTTTTTAGTGTATTGCTCAATTAAAGCACCACAATCTGTACCAGCGTTTTTATGGCAGTTCAAGTTCAAGGAAGAAGTGTGCTTTCCACATTCTCAAACACACTGAGCAGCATTCCTGACATCAAGAATCATTTTGGTGGACTGACTCCACTAGAAACTGTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806985.1 True 1354 mRNA 0.44 8 29355633 29361125

Neighbor

gene id symbol gene type direction distance location
LOC120562792 NA coding upstream 91 29352141 ~ 29355542 (+)
LOC120562836 NA coding upstream 6810 29339254 ~ 29348823 (+)
LOC120562877 LOC103362365,LOC104932167,LOC104967986 coding upstream 16659 29337456 ~ 29338974 (+)
LOC120562725 NA coding upstream 186702 29163561 ~ 29168931 (+)
LOC120561976 NA coding upstream 193343 29157669 ~ 29162290 (+)
LOC120562942 NA coding downstream 381884 29743009 ~ 29745181 (+)
ntrk1 NA coding downstream 419054 29780179 ~ 29811789 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding downstream 764801 30125926 ~ 30133536 (+)
LOC120561633 NA coding downstream 775156 30136281 ~ 30137569 (+)
tap1 tap1 coding downstream 808889 30170014 ~ 30182142 (+)
G77004 NA non-coding upstream 41008 29314099 ~ 29314625 (+)
G76995 NA non-coding upstream 53498 29296958 ~ 29302135 (+)
G76969 NA non-coding upstream 228421 29126955 ~ 29127212 (+)
G76935 NA non-coding upstream 270146 29015876 ~ 29085487 (+)
LOC120563088 NA non-coding upstream 404109 28943905 ~ 28951524 (+)
G77014 NA non-coding downstream 2108 29363233 ~ 29365430 (+)
LOC120562102 NA non-coding downstream 52134 29413259 ~ 29424203 (+)
G77033 NA non-coding downstream 72035 29433160 ~ 29439174 (+)
G77097 NA non-coding downstream 103487 29464612 ~ 29465552 (+)
G77114 bola1 non-coding downstream 221632 29582757 ~ 29585000 (+)
G77009 ubqln4 other upstream 25375 29328789 ~ 29330258 (+)
mex3a mex3a other upstream 67085 29276147 ~ 29288548 (+)
pear1 LOC104932170 other upstream 111541 29179830 ~ 29244092 (+)
LOC120562342 NA other upstream 520265 28800650 ~ 28835368 (+)
G76714 NA other upstream 785767 28553572 ~ 28569866 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other downstream 23010 29384135 ~ 29390053 (+)
G77028 LOC104942601 other downstream 42883 29404008 ~ 29412413 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other downstream 712812 30073937 ~ 30109545 (+)
G77239 NA other downstream 762577 30123702 ~ 30124638 (+)
LOC120562443 NA other downstream 990370 30351495 ~ 30360588 (+)

Expression


Co-expression Network