LOC120563000


Basic Information

Item Value
gene id LOC120563000
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38335484 ~ 38337715 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807005.1
ACTAGTTTCACTTCTCAGGAAGTAAGACTCAGACTGTCGTTGTTACTGACcgagaggtgaaatggcgcagaaaggagttcagctggaccaggaaaccttctcttgtcccatctgtctggatctactgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattagAAGCCACTGGGATGTAGAGGATCATAAGGACAGCTACAGCTGCCCTCAGTGCAGGAAGACgttcacaccgaggcctgtcctgctgaaaagcaccatgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactgggagaaaactcaaagcaCACAAGTCCTGTCTGCAATGTCTGGCTTCTTACTGTGAGAAACACCTCCAGCCTCATTATGAATCAGAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagattttctgccgtactgatcagcagcttatctgttatctctgctctgtggatgaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaagcTTGAGGGGAGTCGacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatctctctgctgataaagcagtggaggacagcaagaagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagccggagcaggagatcactgagctgaagaggaaagatgctgagctgaagaagctctcacacacagaggatctcaaccagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatccgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaagacgtcctgagagagaagtggacaaacgtctcactgacagggactgaagtggacgttttactgccacaaccagagcccaagaccagagctgacttcttaaaatattcatgtgaaatcacactggatccaaacacagcaaacacatATCTGGTATTATCTGAAAGGAACAGGAAAGCAACAGTAATGATGGAACAACAGtcttattctagtcacccagacagattcactgGCTGGTatcaggtcctgagtagagagagtctgactggacgttggtactgggaggtggagaggaatAGAGAAGTTTCtgtagcagtcgcatacaagaaTATGAGCAGAGCAGGGGGGTCAGGTGAATGTGGATTTGGATTCAATGACAAATCTTGGGCGTTATATTGTGACAACAACAGTTATACATTTTGGTACAACAATGTCCAAACTCCCGTCTCAGGTCTTtggtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGACTAAGGGTTTATGGTTTTGATGAGGTTTGGGGCCTTCTCTCGACTAATGGAGCCTCTGCTGAGTtttgtaaactgaaatagacagaagtcatttaagggttaaattctgtttgttgctgagagcttttttttcaatgttttttttttttttaagagataaaaataattgttttgccCTTTTTCGCCTTTAATCAACAGGACAGCTaggcagagctgtatagtaacaaagtagaactacttcactactctacttaagtactaaaaggttGTATCTGTACTTTGtagcattatttttttctcctacttccacttttacttgagtatttatttTCGATGAATTAAATACTTTTACGTTGATACATTTTtgatgtgctgcatcgttactcgttacttttgTGAATTCCTCACACTACGGAGACTgcgtaggttacagtgtgtgtagttacggctacgtaAGAAATCCCCGAGATCGCCTCgcgtttcttttcattacggttgcccgttcagaagtcagagacgatgtaagtgtgtactctttctatttagctattgttgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807005.1 True 2232 mRNA 0.46 1 38335484 38337715

Neighbor

gene id symbol gene type direction distance location
LOC120563006 NA coding downstream 7731 38325282 ~ 38327753 (-)
dcst1 NA coding downstream 84933 38229558 ~ 38250551 (-)
LOC120563013 NA coding downstream 105003 38211820 ~ 38230481 (-)
si:dkey-11p23.7 NA coding downstream 480662 37851161 ~ 37854822 (-)
mrps12 mrps12 coding downstream 605418 37725589 ~ 37730066 (-)
LOC120563004 NA coding upstream 6363 38344078 ~ 38346701 (-)
LOC120563012 NA coding upstream 37947 38375662 ~ 38387184 (-)
LOC120563005 NA coding upstream 134431 38472146 ~ 38474560 (-)
LOC120562484 NA coding upstream 144440 38482155 ~ 38484865 (-)
LOC120563017 NA coding upstream 152259 38489974 ~ 38499657 (-)
LOC120563026 NA non-coding downstream 16846 38318135 ~ 38318638 (-)
LOC120563025 NA non-coding downstream 17637 38317403 ~ 38317847 (-)
G79518 NA non-coding downstream 43185 38287741 ~ 38292299 (-)
G79510 NA non-coding downstream 80446 38250106 ~ 38255038 (-)
G79507 NA non-coding downstream 109396 38222718 ~ 38226088 (-)
G79544 NA non-coding upstream 66712 38404427 ~ 38417922 (-)
G79545 NA non-coding upstream 67146 38404861 ~ 38416578 (-)
G79534 NA non-coding upstream 72129 38409844 ~ 38455753 (-)
G79537 NA non-coding upstream 115401 38453116 ~ 38453844 (-)
G79540 NA non-coding upstream 120605 38458320 ~ 38460000 (-)
LOC120562482 NA other downstream 11200 38318944 ~ 38324284 (-)
G79484 NA other downstream 113724 38063698 ~ 38221760 (-)
LOC120562477 NA other downstream 130302 38140469 ~ 38205182 (-)
LOC120562474 NA other downstream 364136 37958449 ~ 37971348 (-)
LOC120562472 NA other downstream 538718 37744084 ~ 37796766 (-)
LOC120562485 NA other upstream 178886 38516601 ~ 38522389 (-)
nudt17 nudt17 other upstream 328552 38666267 ~ 38680480 (-)
G79767 NA other upstream 569065 38906780 ~ 38908021 (-)
G79820 NA other upstream 760057 39097772 ~ 39138382 (-)
G79872 NA other upstream 1058546 39396261 ~ 39456639 (-)

Expression


Co-expression Network