LOC120563002


Basic Information

Item Value
gene id LOC120563002
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38257203 ~ 38259035 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807006.1
atggcgcagaaaggagttcagctgaaccgggaaaccttctcttgttccatctgtctagatctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaaagccactggGATGAAGAGGATCATAAGTACAGCTACAGCTGCCCTCAGTGCAGGAAGACGTTCACACCAAGGCCTGTCCTGTTGAAAAGCACCATGTTagcagatttagtggaggagctgaggaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGGAAACTCAAAGCACACAAGTCCTGTCTGCAATGTCTGGCTTCTTTCTGTGAGCAACACCTTCAGCTTCATTATGAATCAGCTCCAtacaagaaacacaagctggtggagccgtccaagaagttccaggagaacgtctgctctcgtcatgatgaggtgatgaagattttctgccgtactgatcagcagcttatctgttatctctgcttaatggaggaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaGGCTCGAGGGGAGTCGACAAAACATCCAGCggagaatccaggacagagagaaagatgtgaagctgcttcaacaggAGGTGGAGGCCATCAATCGCTCTGCTGttaaagcagtggaggacagcaAGAAGATTTTCACTGAGCTGATCCGTCTCATagagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagaggatctcaaccagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatccatcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggacgttctgagagagaagtggacaaacgtctcactgacagggactgaagtgGACATTATACCGATAGAACCTGATcccaagaccagagctggattcttaaaatattcacgtgaaatcacactggatccaaacacagcacacacacatctggtattatctgaggggaacaggaaagcaacatACATGTGGGAACAAGAGTCTTATTCTcgtcacccagacagattcactgGTTGGTATCTgcaggtcctgagtagagagagtctgactggacgttgtttctgggaggtggagaagagaggaggagttcatgtagcagtcgcatacaagaatatcagcagagcagggaGGTCGCATGAATGTGGATTTGGATTCAATGACAAATCTTGGGCGTTATATTGTTACAACAACGGTTATACATCTTGGTACAACAATGTCCAAACTCCTGTCTCAGGTcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattaaCTCAGCCGCTCTATGCTGGACTTCAGGTTTATGGTTGTTATGGAgactctgctgagttgtgtaaactgaaatagacagaagtcatgtaagggttaaattctgtgttttaactcttcgacttatttagtctccatgtttgttgctgAGAGCTGATTGATGTGACAttctattttttaatatttttttggtCCTTTTCcgccttttatttattttgataggacagctaggtgagagag

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807006.1 True 1833 mRNA 0.47 1 38257203 38259035

Neighbor

gene id symbol gene type direction distance location
LOC120561705 NA coding upstream 411489 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 514737 37734725 ~ 37742466 (+)
LOC120561575 NA coding upstream 537174 37717368 ~ 37720029 (+)
LOC120562469 NA coding upstream 547242 37706105 ~ 37709961 (+)
LOC120561715 NA coding upstream 671065 37583123 ~ 37586138 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding downstream 9242 38268277 ~ 38270068 (+)
LOC120563007 NA coding downstream 28702 38287737 ~ 38291323 (+)
si:dkey-7j14.6 NA coding downstream 144117 38403152 ~ 38428485 (+)
tg NA coding downstream 266169 38525204 ~ 38575568 (+)
LOC120563014 NA coding downstream 322483 38581518 ~ 38592495 (+)
G79355 NA non-coding upstream 21212 38187616 ~ 38235991 (+)
G79359 NA non-coding upstream 31731 38224568 ~ 38225472 (+)
G79285 NA non-coding upstream 35454 38063697 ~ 38221749 (+)
G79349 NA non-coding upstream 67964 38150814 ~ 38189239 (+)
G79286 NA non-coding upstream 128231 38126801 ~ 38128972 (+)
G79367 NA non-coding downstream 5700 38264735 ~ 38265277 (+)
LOC120563039 NA non-coding downstream 108084 38367119 ~ 38367849 (+)
G79384 NA non-coding downstream 114792 38373827 ~ 38379212 (+)
G79386 NA non-coding downstream 121557 38380592 ~ 38380881 (+)
G79374 NA non-coding downstream 146076 38405111 ~ 38459995 (+)
LOC120562476 NA other upstream 68440 38182150 ~ 38188763 (+)
nek11 nek11,LOC102796711 other upstream 111399 38056416 ~ 38145804 (+)
cmtm7 cmtm7 other upstream 369197 37878916 ~ 37888006 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 706601 37530690 ~ 37550602 (+)
G78989 NA other upstream 824524 37431171 ~ 37432679 (+)
LOC120562481 NA other downstream 42390 38301425 ~ 38305892 (+)
cmtm6 NA other downstream 174939 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 335010 38594045 ~ 39098913 (+)
G79605 NA other downstream 407237 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 417701 38676736 ~ 38780360 (+)

Expression


Co-expression Network