LOC120563004


Basic Information

Item Value
gene id LOC120563004
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38344078 ~ 38346701 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807007.1
atggcgcagaaaggagttcagctggaccaggaaaccttctcttgttccatctgtctggatctactgaaggatccggtgactactccctgtggacacagctactgcatggactgtattaaaagccactggGATGGAGAGGATCGTAAGTACAGCTACAGCTGCCCTCAGTGCAGGAAGACgttcacaccgaggcctgtcctgctgaaaagcaccatgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtgacCTGTGATTTCTGCACTgggagaaaactcaaagcaCACAAGTCCTGTCTGCAATGTCTGGCTTCTTACTGTGAGAAACATCTTCAGCCTCATTATGAATCAGAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagattttctgtcgtactgatcagcagcttatctgttCTCTCTGCTTAATGGAGGAACATAAAGGCCACAACACAGTCTCAGTTGAGGCAGAAAggactgagaggcagaaaaagcTTGAGGGCAGTCAACAcaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatctctctgctgataaagcagtgaaggacagcgagaagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagggaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggagagacgctgagctgaagaagctctcacacacagaggatctcaaccagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatccgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtccgagataaactacaggacgttctgagagagaagtggacaaacgtctcactgacagggactgaagtggacgttttactgctacaaccagagcccaagaccagagctgaattcttaaaatattcacgtgaaatcacactggatccaaacacagcacacacacatctggtATTATCTGAAAGGAACAGGAAAGCAACAGTAATGAGTCAAACACAGtcttattctagtcacccagacagattcactgGCTGGTatcaggtcctgagtagagagagtctgactggacgttggTACTGGGAggtgaagaggagaggaggagtttctgtagcagtcgcatacaagaatatcagcagagcaggggcGTCGTTTGAATGTGGATTTGGATACAATGACAAATCTTGGGCGTTAGATTGTTACAACAACAGTTATACATTTTGGTCCAACAATGTAGAAACTCCCGTCTCAGGTCCTGAGTCCTCCAtagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGACTAAGGCTTAATTGGTCTTTTAGAGACTCTGCtaagttgtgtaaactgaaatagacagaagtcatttaaggtATTCTGTGTTTTAACTTTTGTTGCTGAGAGATGATTGTTGTGACATTCTATTTTTTGtcttgataatatatgttgtttttatttgttgtttgtatacctggagtggtaacaaaaataatttccccctgggattattaaagtatttctgatttcTGATTTTTGTCAGAAATTGTCAGTGTTGTCAATATTTTTCACGTGTTcacacgtttttgttgcttttttcttatttttttacttttatcaacattttgtcacttctttcgacatttatttgcttttctaaacgtttttgtaaacttgtttgacatttcttttgCTTGTATTGACGTTTTAGAAGTGATGAGATATTTTTTGTTAGTTGAGAAAATCATTCGGGGAGTCCCAGAAACTCTCAATGTGCTCAGTAGAGATCTGTTATTTTACCTTTGATTGTTGAAACAGGACGATATGTTAAAAAACATCTTTACCGAAATGATCTGTAGAGATTAGCTGTtgtttgttattcatgtatttctccacgTTATGTATTTGCGGGACAGGAAGATGTCTGTTAAATAGCGGTgacttgtaatcccatgtgggacgggccaaatgtttggcgtgacacagaaatcaaatcaaactaaaAGTGTATTTAGTTTCTCTTCCACTGCGTGGctctgaagagagaaagcacCAGACCTCCTTTATCACTTTGTTCTCTTTGTGGACATTTGTAAAGAAATCTAGATACATTTATTAGTTTGGCGGACCAAAtgttatcataatcataatcaattAGTCATTCTTCTCTTTTACATAGCTGAGATTCTGGTTCTGTGTGGATGAAGTGAATGTGTTGATGAAATCATTGAACAAGAGtctttgaacagactttactgatgggatgtgtgaacaaactgaagctttacatgatgaataaactaacatgaacaaag

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807007.1 True 2624 mRNA 0.43 1 38344078 38346701

Neighbor

gene id symbol gene type direction distance location
LOC120563000 NA coding downstream 6363 38335484 ~ 38337715 (-)
LOC120563006 NA coding downstream 16325 38325282 ~ 38327753 (-)
dcst1 NA coding downstream 93527 38229558 ~ 38250551 (-)
LOC120563013 NA coding downstream 113597 38211820 ~ 38230481 (-)
si:dkey-11p23.7 NA coding downstream 489256 37851161 ~ 37854822 (-)
LOC120563012 NA coding upstream 28961 38375662 ~ 38387184 (-)
LOC120563005 NA coding upstream 125445 38472146 ~ 38474560 (-)
LOC120562484 NA coding upstream 135454 38482155 ~ 38484865 (-)
LOC120563017 NA coding upstream 143273 38489974 ~ 38499657 (-)
trim33l NA coding upstream 561348 38908049 ~ 38945175 (-)
LOC120563026 NA non-coding downstream 25440 38318135 ~ 38318638 (-)
LOC120563025 NA non-coding downstream 26231 38317403 ~ 38317847 (-)
G79518 NA non-coding downstream 51779 38287741 ~ 38292299 (-)
G79510 NA non-coding downstream 89040 38250106 ~ 38255038 (-)
G79507 NA non-coding downstream 117990 38222718 ~ 38226088 (-)
G79544 NA non-coding upstream 57726 38404427 ~ 38417922 (-)
G79545 NA non-coding upstream 58160 38404861 ~ 38416578 (-)
G79534 NA non-coding upstream 63143 38409844 ~ 38455753 (-)
G79537 NA non-coding upstream 106415 38453116 ~ 38453844 (-)
G79540 NA non-coding upstream 111619 38458320 ~ 38460000 (-)
LOC120562482 NA other downstream 19794 38318944 ~ 38324284 (-)
G79484 NA other downstream 122318 38063698 ~ 38221760 (-)
LOC120562477 NA other downstream 138896 38140469 ~ 38205182 (-)
LOC120562474 NA other downstream 372730 37958449 ~ 37971348 (-)
LOC120562472 NA other downstream 547312 37744084 ~ 37796766 (-)
LOC120562485 NA other upstream 169900 38516601 ~ 38522389 (-)
nudt17 nudt17 other upstream 319566 38666267 ~ 38680480 (-)
G79767 NA other upstream 560079 38906780 ~ 38908021 (-)
G79820 NA other upstream 751071 39097772 ~ 39138382 (-)
G79872 NA other upstream 1049560 39396261 ~ 39456639 (-)

Expression


Co-expression Network