LOC120563006


Basic Information

Item Value
gene id LOC120563006
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38325282 ~ 38327753 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807009.1
AAGTGAGACTCAGACAGTCGATGTCACTGAGCGAGAGGTGAAAATGGCgcagaaaggagttcagctggaccgggaaaccttctcttgtcccatctgtctggatctactgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattaaaggCTTCTGGGATGAAGAGGATCATAAGTACAGCTACAGCTGCCCTCAGTGCAGGAAGACGTTGACAGcgaggcctgtcctgctgaaaagcaccatgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatctctgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGGAAACTCAAAGCACACAAGTCCTGTCTGCAATGTCTGGCTTCTTTCTGTGAGAAACATCTTCAGCCTCATTTTAATTCAAAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagattttctgtcgtactgatcagcagcttatctgttatctctgcttaatggaggaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaagctcgaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatctctctgctgataaagcagtggaggacagcgagaagatcttcactgagctgatccgtctcctggagaaaacaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagaggatctcaaccagtttctacacaactaccccttactgtcaccactcagccaatcaacatccagcatccatatccatcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggacgtcctgagagagaagtggacaaacgtctcactgacagggactTACATGGAAGTTTCACTGCcacaaccagagcccaagaccagagctgacttcttaaaatattcacgtgaaatcacactggatccaaacacagcacacacacagctgttattaTCCGAGAGGAACAGGAAAGCAACAGTAATGAGTCAAACACAGtcttattctagtcacccaAACAGATTCACTGACAGGCgtcaggtcctgagtagagagggtctgactggacgttgttactgggaggtggagaagagaggagaagttaatgtagcagtcgcatacaagaatatcagcagagGAGGGGGGTCGGATGAATGTATATTTGGATACAATAACAAATCTTGGGCGTTATATTGTTACAacaacatttatacattttggtACAACAGAGTCCAAACTCCCGTCTCAGGTCCtctgtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttttacagcgtctctgaaaccatgactctcctcctcagagtccagaccacattcactcagccgctATATGTCGGACTAAGGGTTTATGGTGGTTCTGGAcactctgctgagttgtgtaaactgaaatagacagaagtcatttaagggttaaattctgtgttttagCTCTTCGACTTATttagtctccatgtttgttgctgAGAGCTGATTGTTGTGACAATTTAATTTCTAAACTTTTTTGTAAATTAGTTTGACGTTTCTTCTGCTTGTATTGACATTTTAGAAGTGATGAGATGTtcggcgcccagatagctcagttggtagagcggtgCACCCATATATGGAGGTTTACTCATTGAcgcagctgtcctgtcaaataaaggtatgaaaaatataatataaaaaataatcttaaaaaaaaagaagtgatgaGATATTTTTGTTAGTTGAGAAAATCATTCGGGGAGCCACAGAAGCTCTCAATGTGCTCAGTTGAGATCTGTTATTTTACCTTTGATTGTTGAAACAGGGATGATATGTTAAAAAAGATCTTTACAGAGATGATCTGTAGATATTAGCTGTTGTtggttattcatgtatttctccacgTTATGTATCTGCGGGAAAGGCTATGTCTAAACATAGTCTGAAAGtgtatttagtttatttagtttctCTTCCACTGCATGACTCTGAAGAACCAAAAtgttatcataatcataatcaataaGTCATTCTTCTCTTTTACATAGCTGAGATTCTGGTTCTGTGTGGATGAAGTGAATCTGTTGATGAAATCATTGAACAAGAGTCTTTGAACAAACTTTACTGATGGGATGTGTGAACAAACTGAAGCTTTACATGatgaataaactaacatgaacaaagtA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807009.1 True 2472 mRNA 0.44 1 38325282 38327753

Neighbor

gene id symbol gene type direction distance location
dcst1 NA coding downstream 74731 38229558 ~ 38250551 (-)
LOC120563013 NA coding downstream 94801 38211820 ~ 38230481 (-)
si:dkey-11p23.7 NA coding downstream 470460 37851161 ~ 37854822 (-)
mrps12 mrps12 coding downstream 595216 37725589 ~ 37730066 (-)
LOC120562468 NA coding downstream 629876 37693717 ~ 37695406 (-)
LOC120563000 NA coding upstream 7731 38335484 ~ 38337715 (-)
LOC120563004 NA coding upstream 16325 38344078 ~ 38346701 (-)
LOC120563012 NA coding upstream 47909 38375662 ~ 38387184 (-)
LOC120563005 NA coding upstream 144393 38472146 ~ 38474560 (-)
LOC120562484 NA coding upstream 154402 38482155 ~ 38484865 (-)
LOC120563026 NA non-coding downstream 6644 38318135 ~ 38318638 (-)
LOC120563025 NA non-coding downstream 7435 38317403 ~ 38317847 (-)
G79518 NA non-coding downstream 32983 38287741 ~ 38292299 (-)
G79510 NA non-coding downstream 70244 38250106 ~ 38255038 (-)
G79507 NA non-coding downstream 99194 38222718 ~ 38226088 (-)
G79544 NA non-coding upstream 76674 38404427 ~ 38417922 (-)
G79545 NA non-coding upstream 77108 38404861 ~ 38416578 (-)
G79534 NA non-coding upstream 82091 38409844 ~ 38455753 (-)
G79537 NA non-coding upstream 125363 38453116 ~ 38453844 (-)
G79540 NA non-coding upstream 130567 38458320 ~ 38460000 (-)
LOC120562482 NA other downstream 998 38318944 ~ 38324284 (-)
G79484 NA other downstream 103522 38063698 ~ 38221760 (-)
LOC120562477 NA other downstream 120100 38140469 ~ 38205182 (-)
LOC120562474 NA other downstream 353934 37958449 ~ 37971348 (-)
LOC120562472 NA other downstream 528516 37744084 ~ 37796766 (-)
LOC120562485 NA other upstream 188848 38516601 ~ 38522389 (-)
nudt17 nudt17 other upstream 338514 38666267 ~ 38680480 (-)
G79767 NA other upstream 579027 38906780 ~ 38908021 (-)
G79820 NA other upstream 770019 39097772 ~ 39138382 (-)
G79872 NA other upstream 1068508 39396261 ~ 39456639 (-)

Expression


Co-expression Network