LOC120563007


Basic Information

Item Value
gene id LOC120563007
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38287737 ~ 38291323 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807011.1
atggcgcagaaagAAGTTCAGCTGAACTGGgaaaccttctcttgttccatctgtctggatctactgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattaaaagccactggGATGAAGAGGATCGTAAGTACAGCTACAGCTGCCCTCAGTGCAGGAAGACGTTCACACCAAGGCCTGTCCTGTTGAAAAGCACCATGTTagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactgggagaaaactcaaagcaCACAAGTCCTGTCTGCAATGTCTGGCTTCTTACTGTGAGAAACACCTTCAGCTTCATTATGAATCAGCTCCAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcggcatgatgaggtgatgaagattttctgccgtactgatcagcagcttatctgttatctctgcttaatggaggaacataaaggccacgacatagtctcagctgcagcagagagagctgagaggcagagagagctcgaggggagtcgacagaccatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcgatctctctgctgataaagcagtggaggacagcaagaagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgagctggagaagctctcacacacagaggatctcaaccagtttctacacaactacccctcactgtcaccactcagccaatcaacaTCCAGCATCCCTATCCgtcctctgagctgctttgagAACGTGACAGCAGccgtgtcagaagtcagagataaactacaggacgtCCTGAGAGAGAAGTGGACAAACGTCTCAATGACAGGGACTGAAGTGGACGTTTTACTGCcacaaccagagcccaagaccagagctggattcttaaaatattcacgtgaaataacactggatccaaacacagcacacacacggCTGTTGTTATCTGAGGAGAACAGGAAAGCAACATTAATGAGACAACGTCAGtcttattctagtcacccagacagattcactaAAATGTatcaggtcctgagtagagagagtctgactggacgttggtactgggaggtggagaggaatAGAGAAGTTTCtgtagcagtcgcatacaagaatatcagGAGAGCAGGGGGGTCAGGTGAATGTGGATTTGGATTCAATGACAAATCTTGGGCGTTACATTgttacaacaacaaatatatatttttgtccaACAATGTCCAAACTCCCGTCTCAGGTCCTtggtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctATATGCTGGACTAATGGTTTATTGTTCGTATGGAgcctctgctgagttgtgtaaactgaaatagacagaagtcatttaagggttatattctgtgttttaactctTTGACTTATTTattctccatgtttgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807011.1 True 1736 mRNA 0.48 2 38287737 38291323

Neighbor

gene id symbol gene type direction distance location
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding upstream 17669 38268277 ~ 38270068 (+)
LOC120563002 NA coding upstream 28702 38257203 ~ 38259035 (+)
LOC120561705 NA coding upstream 442023 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 545271 37734725 ~ 37742466 (+)
LOC120561575 NA coding upstream 567708 37717368 ~ 37720029 (+)
si:dkey-7j14.6 NA coding downstream 111829 38403152 ~ 38428485 (+)
tg NA coding downstream 233881 38525204 ~ 38575568 (+)
LOC120563014 NA coding downstream 290195 38581518 ~ 38592495 (+)
plin6 NA coding downstream 592967 38884290 ~ 38903260 (+)
LOC120563021 NA coding downstream 703830 38995153 ~ 39009576 (+)
G79367 NA non-coding upstream 22460 38264735 ~ 38265277 (+)
G79355 NA non-coding upstream 51746 38187616 ~ 38235991 (+)
G79359 NA non-coding upstream 62265 38224568 ~ 38225472 (+)
G79349 NA non-coding upstream 98498 38150814 ~ 38189239 (+)
G79286 NA non-coding upstream 158765 38126801 ~ 38128972 (+)
LOC120563039 NA non-coding downstream 75796 38367119 ~ 38367849 (+)
G79384 NA non-coding downstream 82504 38373827 ~ 38379212 (+)
G79386 NA non-coding downstream 89269 38380592 ~ 38380881 (+)
G79374 NA non-coding downstream 113788 38405111 ~ 38459995 (+)
G79370 NA non-coding downstream 114154 38405477 ~ 38412407 (+)
LOC120562476 NA other upstream 98974 38182150 ~ 38188763 (+)
nek11 nek11,LOC102796711 other upstream 141933 38056416 ~ 38145804 (+)
cmtm7 cmtm7 other upstream 399731 37878916 ~ 37888006 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 737135 37530690 ~ 37550602 (+)
G78989 NA other upstream 855058 37431171 ~ 37432679 (+)
LOC120562481 NA other downstream 10102 38301425 ~ 38305892 (+)
cmtm6 NA other downstream 142651 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 302722 38594045 ~ 39098913 (+)
G79605 NA other downstream 374949 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 385413 38676736 ~ 38780360 (+)

Expression


Co-expression Network