LOC120563021


Basic Information

Item Value
gene id LOC120563021
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38995153 ~ 39009576 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807032.1
CTGATGAATAATCCTGCATCACTACCTggactctctcacacacacacacacagCAGGTTTGAAGTTGTGTCCTCATCATGTCAGACGGCAGCAGAATCTTAAACGTTGCGAAGACCTTTATTGAGTCCTGCAGCGATGTTGCTCCGCAGCAGAGGATGAAGCTCTACGACCAATGGGCCGAGACGTACGAACAGGATCACAGCCTGATCGGCTACAGAGCACCACATCAGACGGTAGACTTCTTGAACGCCAACTTCTCGGGGAGTCGTGAGCAGGTTCTGGTTCTGGATGTGGCCTGTGGGTCTGGATGGGTCGCTAAACTGATGGCTGAACTGGGCTTCAGGAACTTTGTGGGAGTGGACGGCAGTAAAGGGATGCTGGAACAAGCTGCAAAGACCGGCCTCTATCAGGACCTCAGACTGGCCTTACTGGGAACAGAACCACTGCCGGCACAGACTGATGGGTTTGACGTGGTGATGATCGTCGGTGCTTTGCGTCATGGTTTTGTTCCAGTCAGCGTTGTGAGGGAGCTCTGCTACGCTGCCAAACCAGGAGGCTACGTTTGCATGTCGAGAGTGGACCCAAAGTTGGAGTCTGGAGACAAATACAAGGTGTGTTTGGAGAAAGAGCTGCAGCTGATGGAGGACGAGGGACTGTGGACCCGTGTGATCAGCCAAGAGATGGACAGATACGTGATTGATGTTAATAATTATCTCAAAGACCAGCACGATGACAAGTACCTCTATGGGACCATGTACCTGTACAGGAAGGCCCTCAATTAGTCTGAATGCATTCATAAAGTGTCCCATCTTTTGATCAGAGTGTGGAAGGTGGAACTAATTCACACTTTTATTTTGCTAAATTCATGAATTCAGAATCAATTTTaaacattgtattttgcatCTGAATTTGAGTAAATTCAAGGCAAAAAAattcagatacacacacacacacacacaggcgcacacacacagacatgcacacagacgcgcacacacacagacacac
>XM_039807033.1
TGATGAATAATCCTGCATCACTACCTggactctctcacacacacacacacagGTTTGAAGTTGTGTCCTCATCATGTCAGACGGCAGCAGAATCTTAAACGTTGCGAAGACCTTTATTGAGTCCTGCAGCGATGTTGCTCCGCAGCAGAGGATGAAGCTCTACGACCAATGGGCCGAGACGTACGAACAGGATCACAGCCTGATCGGCTACAGAGCACCACATCAGACGGTAGACTTCTTGAACGCCAACTTCTCGGGGAGTCGTGAGCAGGTTCTGGTTCTGGATGTGGCCTGTGGGTCTGGATGGGTCGCTAAACTGATGGCTGAACTGGGCTTCAGGAACTTTGTGGGAGTGGACGGCAGTAAAGGGATGCTGGAACAAGCTGCAAAGACCGGCCTCTATCAGGACCTCAGACTGGCCTTACTGGGAACAGAACCACTGCCGGCACAGACTGATGGGTTTGACGTGGTGATGATCGTCGGTGCTTTGCGTCATGGTTTTGTTCCAGTCAGCGTTGTGAGGGAGCTCTGCTACGCTGCCAAACCAGGAGGCTACGTTTGCATGTCGAGAGTGGACCCAAAGTTGGAGTCTGGAGACAAATACAAGGTGTGTTTGGAGAAAGAGCTGCAGCTGATGGAGGACGAGGGACTGTGGACCCGTGTGATCAGCCAAGAGATGGACAGATACGTGATTGATGTTAATAATTATCTCAAAGACCAGCACGATGACAAGTACCTCTATGGGACCATGTACCTGTACAGGAAGGCCCTCAATTAGTCTGAATGCATTCATAAAGTGTCCCATCTTTTGATCAGAGTGTGGAAGGTGGAACTAATTCACACTTTTATTTTGCTAAATTCATGAATTCAGAATCAATTTTaaacattgtattttgcatCTGAATTTGAGTAAATTCAAGGCAAAAAAattcagatacacacacacacacacacaggcgcacacacacagacatgcacacagacgcgcacacacacagacacac
>XM_039807034.1
TCACTACCTggactctctcacacacacacaCAGGTTTGAAGTTGTGTCCTCATCATGTCAGACGGCAGCAGAATCTTAAACGTTGCGAAGACCTTTATTGAGTCCTGCAGCGATGTTGCTCCGCAGCAGAGGATGAAGCTCTACGACCAATGGGCCGAGACGTACGAACAGGATCACAGCCTGATCGGCTACAGAGCACCACATCAGACGGTAGACTTCTTGAACGCCAACTTCTCGGGGAGTCGTGAGCAGGTTCTGGTTCTGGATGTGGCCTGTGGGTCTGGATGGGTCGCTAAACTGATGGCTGAACTGGGCTTCAGGAACTTTGTGGGAGTGGACGGCAGTAAAGGGATGCTGGAACAAGCTGCAAAGACCGGCCTCTATCAGGACCTCAGACTGGCCTTACTGGGAACAGAACCACTGCCGGCACAGACTGATGGGTTTGACGTGGTGATGATCGTCGGTGCTTTGCGTCATGGTTTTGTTCCAGTCAGCGTTGTGAGGGAGCTCTGCTACGCTGCCAAACCAGGAGGCTACGTTTGCATGTCGAGAGTGGACCCAAAGTTGGAGTCTGGAGACAAATACAAGGTGTGTTTGGAGAAAGAGCTGCAGCTGATGGAGGACGAGGGACTGTGGACCCGTGTGATCAGCCAAGAGATGGACAGATACGTGATTGATGTTAATAATTATCTCAAAGACCAGCACGATGACAAGTACCTCTATGGGACCATGTACCTGTACAGGAAGGCCCTCAATTAGTCTGAATGCATTCATAAAGTGTCCCATCTTTTGATCAGAGTGTGGAAGGTGGAACTAATTCACACTTTTATTTTGCTAAATTCATGAATTCAGAATCAATTTTaaacattgtattttgcatCTGAATTTGAGTAAATTCAAGGCAAAAAAattcagatacacacacacacacacacaggcgcacacacacagacatgcacacagacgcgcacacacacagacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807032.1 True 1008 mRNA 0.49 6 38995153 39009576
XM_039807033.1 False 1004 mRNA 0.49 6 38995154 39009576
XM_039807034.1 False 985 mRNA 0.49 6 38995171 39009576

Neighbor

gene id symbol gene type direction distance location
plin6 NA coding upstream 91893 38884290 ~ 38903260 (+)
LOC120563014 NA coding upstream 402658 38581518 ~ 38592495 (+)
tg NA coding upstream 419585 38525204 ~ 38575568 (+)
si:dkey-7j14.6 NA coding upstream 566668 38403152 ~ 38428485 (+)
LOC120563007 NA coding upstream 703830 38287737 ~ 38291323 (+)
LOC120563022 NA coding downstream 11234 39020810 ~ 39030834 (+)
LOC120562489 NA coding downstream 256257 39265833 ~ 39278503 (+)
LOC120563011 syt11,LOC102778393 coding downstream 382372 39391948 ~ 39419673 (+)
LOC120563008 NA coding downstream 415752 39425328 ~ 39427120 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 771660 39781236 ~ 39803887 (+)
G79639 NA non-coding upstream 107955 38886728 ~ 38887198 (+)
G79635 NA non-coding upstream 117151 38874927 ~ 38878002 (+)
G79628 NA non-coding upstream 142045 38852594 ~ 38853108 (+)
G79625 NA non-coding upstream 188669 38804573 ~ 38806484 (+)
G79617 NA non-coding upstream 194515 38716388 ~ 38800638 (+)
G79660 NA non-coding downstream 11363 39020939 ~ 39022181 (+)
LOC120563035 NA non-coding downstream 110734 39120310 ~ 39121952 (+)
G79679 NA non-coding downstream 126910 39136486 ~ 39136756 (+)
G79685 NA non-coding downstream 181858 39191434 ~ 39193622 (+)
G79686 NA non-coding downstream 184404 39193980 ~ 39194992 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other upstream 214793 38676736 ~ 38780360 (+)
G79615 NA other upstream 284144 38691646 ~ 38711009 (+)
G79605 NA other upstream 322141 38666272 ~ 38673012 (+)
cmtm6 NA other upstream 539594 38433974 ~ 38455559 (+)
G79351 NA other upstream 670533 38170054 ~ 38324620 (+)
dcst2 NA other downstream 292463 39302039 ~ 39306087 (+)
LOC120563015 NA other downstream 303063 39312639 ~ 39346432 (+)
LOC120563019 NA other downstream 311856 39321432 ~ 39331516 (+)
G79713 NA other downstream 423885 39433461 ~ 39454292 (+)
G79722 LOC100712425 other downstream 450872 39460448 ~ 39463841 (+)

Expression


Co-expression Network