LOC120563046


Basic Information

Item Value
gene id LOC120563046
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29002636 ~ 29004810 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807052.1
TATGGTCGGGTGCACCAGAGCAGAAAGACCCCCTCCTCTAATCCACTCCTTACGCAAATAAACCTGCATACGTTATGTGAGTGCTTGGATAGAGGTTGGACATTAGGAATCTAGAAAGAGAAAGTCCTGAAAAAGGAAGCTGCCTGTGGTGGATATAATCGACCGCCATGGCTTCCACACCCTCCACCTCTGCCTTGTCTGCTGTTCTCCGGTGTCGCGGAAATATCTGGACCAGGAATCCGCCGACGAAGCGGCCTGCCACCTCGGCGTACAGCCTCGGTCTGACCGGCGGCTCGCCAGTTGAGCGCACCCGGTCAAACCAGGCGTCAGCGTGGGAGCCTTCTCTCCAGGGAGACCGTGCACTGGTGGGAAGAGTTTATAAATCACCCCGGGTGGTTGGCAAAATGTTGAGAGAAAAAGATTCCAATGAAATGAATACATTGTGTCACCCAAAACCTTCGCAATCCTCAGGGGACGCGCACTCATCTGGTGTCCAAAACGCGCTGGTGCGTCAGCAGGCAAGCAGACTGACTTCTAACCTGCCTGGATTAGACACGTGCTCTCAAATAATTCGAAAGATTAATTACAAAACATGTTATGCTACAcacatctgtaaaataatatttgTTCAGGAAACGAGTGAATTCCCAGTTTTGAACGTGCTCATAACGTCTCCATGTGTGATGGAGAATGCAAGACAAATACCGTCTTTCGTGTTAACTGGCTGGTCAACCCTGAAGAGTAGCTGCGTGTCTTTGACTGCTCTGGTGTCAGAATTTATGTTTTTGAAGCTGGAGGTGTTGTGGAGGTCCAGCAGCAGCCCTGATGATGCGCTACAGCATCAAAACATGAAAAGCAATGCACTGCAGGCCAATGGACAAATCCACAGTTCCACTGGCATCACCTCCTCCAAGGACAACTCCGGCTCTGGACAAATGATCCCAGAGAACAGACCTGACTGAGAGTCCAAGGCCTCATCACCAAAAATACACACTGTGATCTAACCTTATTTATTGACTTTTACTTGGCTTTCAAAATGCCCCAAAGCACATTTGGACTTTGGACTTTTTAACCCAGTGATACAACAACTGGTTGTTTTtagagcagttttttttttttgctttaaggAAAAGTAAGACATTATGAAGAAATACCTGAGAAACATCAGTCATATGCATTGTTTAGTACATTAGGCCTCCTGGTGGAGAGGTACAAAAATGGcagtgcattttattttcaagGTTAACCTGTAGCTAAACAAAAACTTATTTAGCAAACATGGAATGGAGTAAAATTAAAAGTAGGCCTATTACCTCTCAGAATATGGAAATATTCAAATCAAGTTTAAGTAAAAACTAAATGTGGAGGAATAATTGAAATATTTATTCTTTCCTCTTGTGTTTTGAAGATATTTGCATGATTTTTCACTCTGAAATATAGTTTGGATAAAAAATATAGATCCCTACAAATGTCCAAGATCACTTGCATAAATGTAGCCATCTTTTATACTTTCCAGCTGTTTTAACAATGTCCTGTAAAGTATGAAAGACAATCTCCCAAACAGCATATGCTGTTTGGGAGATTGTCATCAGTGTAGATAATGAAATGAAAACCAAATTTCTCCACTAAACCAAACACTTTGCCACTGACTTCTCTGCAGCTCAAGCAGAAGATGTATGCTGTTACATAAGATGGGACCTTTTCGTTAACATATTCCGACGCCACAGTGTGTGAAAGCAGACAATAACTGTTTACAAAGACATCAAACGCTGCTGTTTCTTAATTAGCTCCACTGAGAGCCGCTCGGACGTCAAAGTGTTGCGTAATTTCTCAAGGTGACAGTTGGGGCGGGACTTCCCGTGACTGCTCGCTACCCAGGAAGTCGTCGTGTtacttttcctcctcctcttccagtCTTGTGAGAAACAAGATAAACTAAAGGGGTGTTAAGTTGCTTTTATAGCCGAGAAACTAACAAGAGAACAGTTTCACATCGGCTCCAAACCGTCCTCTCGGCCCATGTTGTTTAACTTTGCTGCTTGTCATCGAAGAAATGgccacaaaaaaacagacacgcTCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807052.1 True 2083 mRNA 0.43 2 29002636 29004810

Neighbor

gene id symbol gene type direction distance location
rnf183 NA coding upstream 1969 28998228 ~ 29000667 (+)
dhx16 dhx16 coding upstream 5202 28981531 ~ 28997434 (+)
fli1rs LOC104940799,LOC103372032,LOC104935032 coding upstream 64873 28918527 ~ 28937763 (+)
LOC120562583 NA coding upstream 98839 28898084 ~ 28903797 (+)
LOC120562582 NA coding upstream 108225 28890050 ~ 28894411 (+)
sh3bp5la LOC104964842,LOC103356806 coding downstream 3763 29008573 ~ 29019134 (+)
gabbr1a gabbr1,LOC103356805 coding downstream 14837 29019647 ~ 29082136 (+)
bag6 bag6,LOC104960485 coding downstream 125499 29130309 ~ 29146625 (+)
LOC120561976 NA coding downstream 152859 29157669 ~ 29162290 (+)
LOC120562725 NA coding downstream 158751 29163561 ~ 29168931 (+)
LOC120563088 NA non-coding upstream 51112 28943905 ~ 28951524 (+)
G76885 NA non-coding upstream 59910 28941062 ~ 28942726 (+)
G76887 NA non-coding upstream 62281 28939209 ~ 28940355 (+)
G76859 NA non-coding upstream 121448 28880973 ~ 28881188 (+)
LOC120562350 NA non-coding upstream 160366 28836396 ~ 28842270 (+)
G76935 NA non-coding downstream 11066 29015876 ~ 29085487 (+)
G76969 NA non-coding downstream 122145 29126955 ~ 29127212 (+)
G76995 NA non-coding downstream 292148 29296958 ~ 29302135 (+)
G77004 NA non-coding downstream 309289 29314099 ~ 29314625 (+)
G77014 NA non-coding downstream 358423 29363233 ~ 29365430 (+)
LOC120562342 NA other upstream 167268 28800650 ~ 28835368 (+)
G76714 NA other upstream 432770 28553572 ~ 28569866 (+)
G76707 NA other upstream 481014 28520699 ~ 28521622 (+)
LOC120562434 NA other upstream 585881 28414518 ~ 28416755 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other upstream 586983 28388097 ~ 28415653 (+)
pear1 LOC104932170 other downstream 175020 29179830 ~ 29244092 (+)
mex3a mex3a other downstream 271337 29276147 ~ 29288548 (+)
G77009 ubqln4 other downstream 323979 29328789 ~ 29330258 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other downstream 379325 29384135 ~ 29390053 (+)
G77028 LOC104942601 other downstream 399198 29404008 ~ 29412413 (+)

Expression


Co-expression Network