bves (bves)


Basic Information

Item Value
gene id bves
gene name bves
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 9127850 ~ 9144754 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807105.1
TGTAGagccctcccccccctccatcCCCCATCTGAGGGTCCAGCCTACAGTCACCAGCAGTGTCTCAAGTCTTTCACAAAACCCATTCCTCCTTCTTTGCTGTACCACCGGCTGCTGCTGAATCGTTTTCAAGGTGACCGTGCTGCAGGATGTCTTCTACCCCAGAGCTGCCCCCCTTCCTCTTCACCACGCTGCCCTCCTTCCCCTCGGCCACTCCAGGAGTCCCGACGGCGGAGGTCAATGCCACCTCGTGCCAGGAGTGGGAGCAGGCCCACCACCTCCTCTTCCATCTGGGGAGCCTGTCCCTGCTGCTGGGTCTGGTCATCCCTACCACCCTGGGCCTGCACATGATCCTGCTGCGCCTCCTCCTGATGACAGGATGTGGTTTCTTCATTGTGTGGGCGACTCTGTACAGGTGCAACCTGGATGTGATGGTTTGGAACGTGGTGTTTCTGGTGGTCAACTTCATGCACTTGTTCTTCCTGCTGTACAAGCGCAGGCCGATTAAGATCGACAGGGAGCTGCGGTCCATCTACAAGCGGATGTTTGAGCCCCTCCATGTGCGGGAGGCTCTGTTTCAGAGGCTCACGGGACAGTTCTGCACCATCCAGACCCTGAAGAAAGGCCAGGCCTACGCTGCCGAGGACAAGACGTCTGTGGACGAACGCCTCAGCATTCTCCTCAAAGGAAAGATGAAGGTATCATACCGAGGCCATTTCCTCCACAACATCTATACCAATTCATTTATTGACTCTCCAGAGTTCAGGTCCACTGAGAtgcacagaggagagaagttTCAGgtgacCATCGTGGCAGAGGAGAACTGTAAGTTCCTGTGTTGGTCTCGAGAGAGGCTCACCTACTTCCTGGAGTCAGATACTTTCCTCAATGAGGTGTTCCGGTACCTCATTGGCAAAGACATCACCAACAAACTGTACTCTCTGAATGACCCCACACTCAGTGACAAGGCAGTGAAGAAGATGGAACGCCAGCCCAGCCTGTGCTCTCAACTGTCGATGACGCAGATGAGGAACAGCATGGCGAGCACCAGCGACACTGACGATGTCCTGAACCAGATCCTACGAGGAGGATCGGCTGGATCATCGCTCCaatccCCTGGCACTAAAACCTCCTCAAAGATGAAGCCCATAGAAGAAGGCATGGAGGATGACGTTTTTGAAGAACCTGCGCCCTCCAAGTCTCGCCGTTCCACTAAGGAAGTGTAGCCAGCATGCATGGGAAGAGAAtagattagataatactttattcatcccacaatggggaaattcacttgttacagcagcagtttttccacaaGATCAAATGCATATTATGCTATTTGTTTAGCAACCTAACGCCCAGAGCCTGATTGATACACCGGCATGGCCGACGTTATCAGCCGTGCCGTTTTCCTAGGTAAATAATGTCTGACTATATGCTGTCATTTAGAAACAGTGTCTCCattacatagtttgtccaccagagagcactgacaagtttatttttacacTCTAAAATGTTACATACTATCTTCGTCACaattctttaaaa
>XM_039807106.1
TGTAGagccctcccccccctccatcCCCCATCTGAGGGTCCAGCCTACAGTCACCAGCAGTGTCTCAAGTCTTTCACAAAACCCATTCCTCCTTCTTTGCTGTACCACCGGCTGCTGCTGAATCGTTTTCAAGGTGACCGTGCTGCAGGATGTCTTCTACCCCAGAGCTGCCCCCCTTCCTCTTCACCACGCTGCCCTCCTTCCCCTCGGCCACTCCAGGAGTCCCGACGGCGGAGGTCAATGCCACCTCGTGCCAGGAGTGGGAGCAGGCCCACCACCTCCTCTTCCATCTGGGGAGCCTGTCCCTGCTGCTGGGTCTGGTCATCCCTACCACCCTGGGCCTGCACATGATCCTGCTGCGCCTCCTCCTGATGACAGGATGTGGTTTCTTCATTGTGTGGGCGACTCTGTACAGGTGCAACCTGGATGTGATGGTTTGGAACGTGGTGTTTCTGGTGGTCAACTTCATGCACTTGTTCTTCCTGCTGTACAAGCGCAGGCCGATTAAGATCGACAGGGAGCTGCGGTCCATCTACAAGCGGATGTTTGAGCCCCTCCATGTGCGGGAGGCTCTGTTTCAGAGGCTCACGGGACAGTTCTGCACCATCCAGACCCTGAAGAAAGGCCAGGCCTACGCTGCCGAGGACAAGACGTCTGTGGACGAACGCCTCAGCATTCTCCTCAAAGGAAAGATGAAGGTATCATACCGAGGCCATTTCCTCCACAACATCTATACCAATTCATTTATTGACTCTCCAGAGTTCAGGTCCACTGAGAtgcacagaggagagaagttTCAGgtgacCATCGTGGCAGAGGAGAACTGTAAGTTCCTGTGTTGGTCTCGAGAGAGGCTCACCTACTTCCTGGAGTCAGATACTTTCCTCAATGAGGTGTTCCGGTACCTCATTGGCAAAGACATCACCAACAAACTGTACTCTCTGAATGACCCCACACTCAGTGACAAGGCAGTGAAGAAGATGGAACGCCAGCCCAGCCTGTGCTCTCAACTGTCGATGACGCAGATGAGGAACAGCATGGCGAGCACCAGCGACACTGACGATGTCCTGAACCAGATCCTACGAGGAGGATCGGCTGGATCATCGCTCCGTTACTGTAACCATGAGTGCCTTTCAGAAGACCAGTTTACAGGAGAGTATTCCATTGGTTTATTTCCCTAACCTCAAGATGATTAGAGATGCTGGTGTACCAAGAACGTGTAAAAAGAACAAACAGAAGCTGAGGGAAAGACGTGGGCTCGAAATGTCACTAGCATTTAAATCCTTCTAACGGGAGCTAATTGGTGTGCAGATCAGTTTGTTCTTTCTATGCTATTGTTTTGATCCAGCACCCATCCCATTTGTGCGTTATATTGTACCATGAATGTGGCCTATTACTTCAGAGGTTCAGAGGTTCAATTTATTCATCCATAAAAACATGGAAATTGCAGTTCTACCGTCCTAATCAGCCAATACTGATAACCAAAATGCAGGACATAAATaccaacaaaaaaattataatattatgatataataatataacgTCCTCCATGTTGTCACAGCACTAATTTCATCAGCACAGTGCCATGTCATACTCTGCACTCTGCCGCTCTCACTTTCTCTGCTGTACTGTTTTCATTCACTAATTATTTCCACTCGCTTCTACTTTGGGGTTTCTCGGTTTATCAGTGTTCAGTCACCACAACGTACATTTCAATATCatcaaactacatttttttcaaagcaGGATACTTTTAACATACAGAAACATTGAACTGTGTCTAAATAAAATTAGTCCTGGCACAATGAACTTGAAGAAATACTCAAAAATGATCATTTGTATTACTCACCCCATGCTTTCTTGAATTCTtgaagaaaaatgtgtttttcttgcaTGCCTCTAGTCTACGGtgaacaaagaataaaaaaataggtGGCCACGTGGACGCCTGTGAGATAGAATTCATTCAAATTTTTGAATTGATTCAGTTCagattctttcatttt

Function

symbol description
bves Predicted to enable cAMP binding activity and structural molecule activity. Involved in heart development. Acts upstream of or within several processes, including animal organ development; bicellular tight junction assembly; and skeletal myofibril assembly. Located in sarcolemma. Is expressed in several structures, including EVL; cardiovascular system; eye; integument; and optic vesicle. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2X. Orthologous to human BVES (blood vessel epicardial substance).

NR:

description
blood vessel epicardial substance-like isoform X1

GO:

id name namespace
GO:0061436 establishment of skin barrier biological_process
GO:0070830 bicellular tight junction assembly biological_process
GO:0090504 epiboly biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K21108 BVES; blood vessel epicardial substance

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807105.1 False 1551 mRNA 0.52 8 9127850 9144754
XM_039807106.1 True 2006 mRNA 0.47 8 9127850 9144293

Neighbor

gene id symbol gene type direction distance location
popdc3 popdc3 coding upstream 4763 9115711 ~ 9123087 (+)
LOC120562991 LOC103388880 coding upstream 26348 9088184 ~ 9101502 (+)
LOC120562241 NA coding upstream 623398 8454764 ~ 8504452 (+)
pomgnt2 pomgnt2 coding upstream 743230 8364356 ~ 8384620 (+)
zgc:114181 LOC104932954,LOC102799802,LOC101469313 coding upstream 928989 8187287 ~ 8198861 (+)
hace1 hace1 coding downstream 2861 9147615 ~ 9190089 (+)
ascc3 ascc3 coding downstream 862521 10007275 ~ 10200405 (+)
sim1a sim1,LOC103355653,LOC103388874,LOC102313558 coding downstream 1070739 10215493 ~ 10241076 (+)
LOC120562586 LOC104935658,LOC103355652,LOC101471248 coding downstream 1183410 10328164 ~ 10357777 (+)
LOC120562578 NA coding downstream 1224111 10368865 ~ 10378754 (+)
G71517 NA non-coding upstream 2118 9123163 ~ 9125732 (+)
G71475 NA non-coding upstream 358786 8768688 ~ 8769064 (+)
G71476 NA non-coding upstream 361716 8765894 ~ 8766134 (+)
G71463 NA non-coding upstream 384060 8743528 ~ 8743790 (+)
LOC120561615 NA non-coding upstream 480141 8646964 ~ 8647709 (+)
G71553 NA non-coding downstream 175698 9320452 ~ 9320696 (+)
G71554 NA non-coding downstream 179063 9323817 ~ 9324017 (+)
G71557 NA non-coding downstream 226250 9371004 ~ 9371948 (+)
G71562 NA non-coding downstream 310621 9455375 ~ 9455641 (+)
G71591 NA non-coding downstream 683840 9828594 ~ 9829307 (+)
trnay-gua_42 NA other upstream 278130 8849632 ~ 8849720 (+)
trnay-gua_41 NA other upstream 278513 8849249 ~ 8849337 (+)
trnay-gua_40 NA other upstream 279279 8848483 ~ 8848571 (+)
trnay-gua_39 NA other upstream 280369 8847392 ~ 8847481 (+)
trnay-gua_38 NA other upstream 280695 8847067 ~ 8847155 (+)
G71610 NA other downstream 1062661 10207415 ~ 10208197 (+)
LOC120561920 LOC106676202,LOC102303534 other downstream 1601254 10746008 ~ 10751849 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other downstream 1640900 10785654 ~ 10961130 (+)
G71743 NA other downstream 1675541 10820295 ~ 10821500 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other downstream 2322591 11467345 ~ 11482423 (+)

Expression


Co-expression Network