LOC120563110 (dcdc2,LOC102296430,LOC102788673)


Basic Information

Item Value
gene id LOC120563110
gene name dcdc2,LOC102296430,LOC102788673
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 15682419 ~ 15707502 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807219.1
aaccatcacttgTTGCGTAGCGGTGCACGCGAAGCGAATAACTCTGCGCCGTTCCCTCTGTAACGGATTGAGATTCTGCAAAATGTATGGAGCGTTGACATAACGCCGGGGAATATCAACAGAACTGATGCATGCGCTCATGTGTTTTATTCAGTAACCTCATCTTTAACCCGGGAGCTCGTCGCCTTTCGCCCTGAACGCTTCTGTGTCCAAACTGTCCACTTCGTTTATCCCCACTCAACCCTAAACATTTGGCCAGGATGGACCAGCTCTAATGTTATTATAATGGCCTATAAGCCTTTATCTCGCAATTGGGGTAAAGCTGCTGTAAGTTTATTATAACaaagatctctctctctctctctctgtcgcgtGCCAGCTTGCTTGCTTTCACGCACAACGATGGGCTCTGAGAAGCCAAACTTTCTGTCACAGCCGGTCGTGAAGAACATTTTCATGTACCGAAACGGCGACCCTTACTACGACGCTCGCCGGATTGTAATAAACCAAAAGAGGGTGTCCAACTTTGAGACTTTGCTGAGAGAGGTGACCGGCGGGATAAAAGCCCCATTTGGAGCGGTGAGAAACATCTACACACCGAGAGGAGGCCACAAGGTGGACTGCTTGGAGAGCCTGCAGAGCGGGGAGCAGTACGTCGCTGCTGGGAGGGAGAGATTCAAAAGAATGGATTACCTACAGATAGGCTCGAGAAGGAAGAGGATGATGCAGACTCTTCCGATGCAGGCCAGACCACTGCCACCGAATCGAATCATTGTGTCAGCTCGATTCCTGAAACCCATCAAGGAGCCGTGCACAATATTTGTGGTAGCAAATGGCGATGTCTTGGACCCTGCAATGAGGCTGTTGGTCCACCAAAGGATGCTCGGCCAGTTTGACAGAATACTAGAGATGATCACAGAGAAGATGGGTTTGAAAGTCCTGGGGGGTGTCCGAAGTCTCTACACCTATGAAGGCCACCAGGTGACTGATGGAAATCAGCTGGAGGGTGGTCAGCTGTATGTGGCTGTGGGAAGAGAAAGGTTTAAGAAGCTGCCCTACAGTGATCTTCTCTTCACCAAACCAAGAATGACAAGGAGGGTGAATGGAATGAAAGCTTACTCTCTACCGCCTATCTACAGATTCTCCAGGCAAAATGGAAATGGTACATCTATGGTCCGATGCAGTGATAGTGGAGATGGAGACTCCAAGGCCTCTCCACCAGGCCACAATGGCCGCAACAAGGAGCACATATCCTCCATCGTCAGAGAGATCTCTCAGGCCAAACTCAAGGCCCtcaggaagaggaggagtggaCAAAGCATGGCTCTCGGCAACTCTGACAATGATGACCTGGAATCAAAGGATGATGATAGAGATACTGAAGACAAGACCCCCCCAGACCAGCCAGCCGATGAGAAACCTGCAGATGGTGATGCAAAAGCTGAAGACGAAAATGGTGAAGaggcaggagaggaggaggctgTTGCTTCTGAAAACACCACAGAAGCAGACACTTCCGCTAGCAAAGAAGAAAAGAATGAAAACCAGGACACAAGTGGCAAAAAACAgggaggggaagagagggaggagaatgccgaggaaaatgatgaaaaagaggGAGAAGCAACAGCAGGATctgaagagaaggagagtgaaataaaagaaaaagtgaagGAGGAGGTCACAGATGAAAATAAGGATGATGTTAAGAGTGAGTCCAGTAGTAGCAACATTGATAAGACCCAGGAGAGTAAAGAGAATGGAAGCCATTCATCTTCTGAGTGTGAAAAAGATGATCAAGACAAAAATACAGAAGAAGAGAAGCAAGATGAAGACAGTGAAAAGGGTGAGAGAAGCAGTGAGGAACAAGTTAACGATGTAGACATGGGGGAGGAActgaaaaagacagaaaacagcagTGACCCGGGGAAGACTCCGTCAGGTAACGAGACAAAAGAGAACGATAACGGCAGAAGTAGCAGTAGCGGTCGTAACCAGGGAGAAGATGTGAGAGAAACAGAAGAGGGAGCTACCAAGGACTCAGGAGAAGATGAGAGAGAGGTGAACGGAGAGGCCAGCGGAGGCGATGATGAGGTGGAAAATGGAGCAGAGCTAGACATGGACAAGAATTCAGCCAAGGATGCCGCAGCAAATGGAGAGGAAGGGGTGGATGGTGACAAAGACAATCCAGGAATGTAAGAGAAAATTGTAGGATGGACAGTGTTGTGTTGAAAATAGTAAGCAATACTTCTACAATCTAAAAGTAATGAAGGTGGCAGAGCAAATTCAcagaaagtgaaagcaaagGTTGTTTTACGGCCATGTAGAATCTGCACTGAGAAGTAAACGAGCGAAAAGTAGTAGAAGCTTTGAATGGCTGCTAAATGATGTCAGGTACAAAAACACCATCAGAATTTCAGGTATATATTCAAAAGCTATTTATCAAAACATTATTCATAACTATCATGTCTGAAACAGACAAATAAAAGTTACATACATATTCTTATTTTTCATTAAGTCTTACTATTACCTCTTGGGCTGCTTTATCGTTTCAGTATACATTGTCTGTGAGCACTGTAGTGAGTGATTAAAATTACTAGTAACAgactttaaatgtttaaacatgtttatttttaacaggTGTGATTATACTAGttgcttgtttttaaagatgtttttgtatgtttgttatttttgtctATTTTCCAAAGCAAGTGATAGAagtgaacttttttttaagttgatacaataaactgtgtgtaatgttgtaagcatacagtatgtgtctgaATGTTCCACATCATAATCATTCATTATGTCTTAtgcatatttgtttatttacatctatcttctacaataacaataaaagagAAACATTACAGTGAGGCACCTTTAAaagatactttaaataaat

Function

symbol description
dcdc2 Predicted to enable kinesin binding activity. Involved in several processes, including regulation of cilium assembly; regulation of signal transduction; and sensory perception of sound. Located in cytoskeleton; cytosol; and nucleoplasm. Implicated in attention deficit hyperactivity disorder; autosomal recessive nonsyndromic deafness 66; dyslexia; nephronophthisis 19; and sclerosing cholangitis.

NR:

description
PREDICTED: doublecortin domain-containing protein 2

GO: NA

KEGG:

id description
K23405 DCDC2; doublecortin domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807219.1 True 2914 mRNA 0.44 9 15682419 15707502

Neighbor

gene id symbol gene type direction distance location
slc6a3 slc6a3 coding upstream 7197 15657241 ~ 15675222 (+)
LOC120562533 lpcat1,LOC103360438,LOC100699650 coding upstream 29367 15619516 ~ 15653052 (+)
irx2a irx2,LOC102783739 coding upstream 268372 15408178 ~ 15414047 (+)
trnae-cuc_16 NA coding upstream 655766 15026582 ~ 15026653 (+)
dnah5 dnah5 coding upstream 808306 14762370 ~ 14874113 (+)
mboat1 mboat1 coding downstream 788224 16495726 ~ 16508741 (+)
LOC120562688 tnfrsf11b,LOC103369092 coding downstream 925374 16632876 ~ 16718524 (+)
LOC120562690 NA coding downstream 1014134 16721636 ~ 16724556 (+)
LOC120562939 NA coding downstream 1018846 16726348 ~ 16729348 (+)
LOC120562315 NA coding downstream 1025130 16732632 ~ 16816257 (+)
G72680 NA non-coding upstream 92261 15589897 ~ 15590158 (+)
LOC120562980 NA non-coding upstream 519173 15100816 ~ 15163246 (+)
G72634 NA non-coding upstream 679285 15000671 ~ 15003134 (+)
LOC120562067 NA non-coding upstream 1036631 14644376 ~ 14645788 (+)
G72561 LOC103365327 non-coding upstream 1041651 14637870 ~ 14640768 (+)
G72704 NA non-coding downstream 129460 15836962 ~ 15844938 (+)
G72705 NA non-coding downstream 136808 15844310 ~ 15847320 (+)
LOC120562129 NA non-coding downstream 261675 15969177 ~ 16009134 (+)
G72775 NA non-coding downstream 467592 16175094 ~ 16181930 (+)
G72795 e2f3 non-coding downstream 773177 16480679 ~ 16481932 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 122127 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 1049698 14626478 ~ 14632721 (+)
G72506 NA other upstream 1256239 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 1312328 14175817 ~ 14370091 (+)
cmc1 cmc1 other upstream 1538123 14133584 ~ 14144296 (+)
G72750 LOC104952694,LOC106925895 other downstream 310857 16018359 ~ 16072201 (+)
G73031 LOC103366415 other downstream 1742083 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 1749141 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 1938011 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 2043428 17750930 ~ 17779130 (+)

Expression


Co-expression Network