LOC120563115 (LOC104936139,LOC100707989,LOC101475232,LOC102313234)


Basic Information

Item Value
gene id LOC120563115
gene name LOC104936139,LOC100707989,LOC101475232,LOC102313234
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7885697 ~ 7904575 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807228.1
gtcccgtctctctctctcagcggATGGCGGAAGTAGCAGCCCGCCGGTGTGTCGGTCGCTGTCTGACACGTCACTGAGGTCAAACGGGAGGAAAGATGGCGAGCACCTATCAGAGTTTCAACCTGCGCACCACACCAGAGAAGTTCTACATCGAGGCTTGCGATGACGGATCTGAGGACGTCCTGGCCATCGACAGGGTTTCCACGGAGATGACTCTCACAGTGAAGAGGGACGTCCCTGCGTCTGCTGACAGCCGGCCAATCTGTGGACTGATGGGGACCATCCGTCTGGTGGCAGGCATGTACGTGGTCGTCAtcacgaagaagaagaaggtggGAGATTTGCTGGGCCATGCGGTGTGGAAGGCTCTGGACTTTGACATCATCTCCTATAAGAAGACAATCCTACATCTGACAGACAACCAGATGCAAGACAACAAGACCTTCCTGTCCATGATCAACAATGTGCTTCACACAGACGGCTTCTACTTTGCAACAGACTACGACCTGACCCACACCCTACAGCGCCTGGCCAACACCAGCCCCGAGTTCCAGGAGATGAGCCTCCTGGAGAGGGCAGATCAGCGTTTCGTCTGGAATGGCCACCTGTTGAGGGAATTCATTGCACAGCCGGAGTTACACAGGTTTGTGTTTCCTGTTGTCCATGGCTTCATCACCATGAAGTCCAGCTGCATCAATGGAAAGGTGTTTGAGTGGACCATTATCTCCAGGAGGAGCTGTTTCAGAGCCGGCGTCCGCTACTATGTCCGAGGCATTGATTCAGAAGGCCATCCTGCTAACTACGTGGAAACGGAGCAGATCGTTCAGTTCAACAGTGCCAAGGCTTCCTTTGTTCAGACTCGAGGCTCCATCCCCTTCTACTGGTCCCAAAGGCCCAATCTCAAGTACAAGCCCAAACCCCAGATCAACAAAACCGTGAACCACcTGGACGGGTTCCAGAGACACTTTGACTCGCAGATTATTCTCTACGGAAGACAAGTCATTTTGAACTTGATCAACCAGAAGGGCTCCGAGAAGCCACTGGAGCTGGCGTTTGACAAGATGGTGACCAACCTGGGTAATGGCATGATCAAGTACATAGCCTTTGACTTCCATAAGGAGTGCAGTCGGATGAGGTGGCACCGGCTGCAGATCTTACTGGACATGGTCGCTGAAATGCAGGATGAGTTTGGatacTTCCTGGTGGATGCGGACGGGAAGGTGCTGCTGAACCAGGAGGGGGTGTTCCGTAGCAACTGCATGGACTGCCTGGACCGGACCAATGTCATCCAGAGCATGCTGGCCCAGCGCTCGCTGCAGTCCCAGCTACGGAGAATGGGAGTCCTCCACACGGGCCAGCAGATTGAGGAGCAGACCGACTTTGTGAAGATGTACAAGAACGCCTGGGCAGACAACGCTGACGCCTGCGCCAAGCAGTATGCTGGCACTGGGGCCTTGAAGACGGACTTCACCAGGACGGGGAAGAGGACTCAGTGGGGGCTGCTGATGGACGGCTGGAACTCCATGATCCGATATTACAAGAACAACTTCTCTGATGGCTTCAGACAGGACTCCATCGATCTGTTCCTGGGCAACTACGCTGTGGACGAAGCTGTTTGGACCACCCCACTGCGTGATCCCAAAGACTGGAAGTTTCTGACGTTGCCTATCGTCATGGTGGTAGCATTCTCCATGTGCATCATCTGCCTGCTCATGGCTGGTGACACGTGGACTGAGACTCTGGCCTACGTTCTCTTCTGGGGATCAGCCAGCGTGGTGACGGGCGGCCTCATCCTCTTCAACGGACTGGACTTTGTGGACGCCCCGCGGCTGGTGCAGAAGGAGAAGCTggactgaatgtgtgtgtgtggaaagcagCTCGGCCCCGGCGAGCTCACCGCCTCATCCTCTGGCTCTTCATCACTCTCCccccggcagcagcagcagcggcggcagGGGGGGGCCTGGAGCCTTTACTAGC

Function

NR:

description
PREDICTED: phosphatidylinositide phosphatase SAC1-A isoform X3

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0042578 phosphoric ester hydrolase activity molecular_function

KEGG:

id description
K21797 SAC1, SACM1L; phosphatidylinositol 4-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807228.1 True 1980 mRNA 0.56 20 7885697 7904575

Neighbor

gene id symbol gene type direction distance location
rbm42 rbm42 coding upstream 102215 7767759 ~ 7783482 (+)
LOC120561799 NA coding upstream 144663 7731826 ~ 7741034 (+)
LOC120561797 NA coding upstream 178106 7665238 ~ 7707591 (+)
fzd1 fzd1,LOC104958298,LOC104925482 coding upstream 587455 7295946 ~ 7298242 (+)
LOC120562880 NA coding upstream 855936 7004604 ~ 7029761 (+)
gpd1l gpd1l,LOC103034694,LOC108434205,LOC107600618 coding downstream 125107 8029682 ~ 8046678 (+)
tcaim tcaim coding downstream 143885 8048460 ~ 8059416 (+)
LOC120561723 NA coding downstream 179325 8083900 ~ 8089659 (+)
LOC120561722 NA coding downstream 187077 8091652 ~ 8096292 (+)
LOC120561724 fam26e,LOC103478772 coding downstream 191786 8096361 ~ 8104392 (+)
G71176 NA non-coding upstream 10097 7871517 ~ 7875600 (+)
G71148 NA non-coding upstream 83682 7796341 ~ 7802015 (+)
G71150 NA non-coding upstream 141696 7742632 ~ 7744001 (+)
LOC120561796 NA non-coding upstream 225612 7656163 ~ 7660085 (+)
G71091 NA non-coding upstream 318283 7567107 ~ 7567414 (+)
G71204 osbpl10 non-coding downstream 68287 7972862 ~ 7980906 (+)
G71200 NA non-coding downstream 142375 8046950 ~ 8047669 (+)
G71211 NA non-coding downstream 144460 8049035 ~ 8059805 (+)
G71201 NA non-coding downstream 155535 8060110 ~ 8060801 (+)
G71220 NA non-coding downstream 163480 8068055 ~ 8069124 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other upstream 84317 7731022 ~ 7801380 (+)
znrf2b znrf2 other upstream 385515 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 593262 7039163 ~ 7292435 (+)
G70894 NA other upstream 1924843 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 2290797 5591199 ~ 5594900 (+)
G71309 NA other downstream 217026 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 378805 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 844368 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 855471 8760046 ~ 8776508 (+)
trnay-gua_1 NA other downstream 905776 8810351 ~ 8810439 (+)

Expression


Co-expression Network