flad1 (flad1,LOC102778463)


Basic Information

Item Value
gene id flad1
gene name flad1,LOC102778463
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21890529 ~ 21900652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807229.1
TTGACAGCTGTTAGCATCATGCTatcgttctcttaatacatctatACATGTTATCTGAGTGGAGATGGTGCAAAGTGTCAACTCGCAAATAGACGAGTTCTCGCTAGCGTTCGTGTTGCTGACTGCATTACTTATCGTGTTCAACGTTACTTTGGCCAAAGGATACAGCTCCGCATCCTCTACACTGATTCTAGCACAACCTGACCGTATTTCAGTTACTTCCGGGTACATAAAAAAGGCAGACCGTTTAAGACAGCCCTCCGTAAACCTGATTGGCTCTGGGACCTCTCGGGAAACCGTTTCTTATTTGTGATTGGACGGCTAGCGACTTATGTTTTCAGTGACATGTAGCCACAAACGGTTGGATACGTAACGAGGTCATATGCGCCTCAGGAGATACTCCCTGGTAGGAGACAGgttatgaagaagaagaagaaggcctgaactgtaatgaaacattttgGGATACTCCATATGGATTCTTCATGTTGACcCTTGCTTTTCCCAAACTGAGTAGAACATTGGTGCGAGTGAGGAGACTGGCGGCTCAGCTCTCCAAAGCAACCATGTCTACAAACCTCCAGGGCTCCAGTCCGTCCTTTGCAGCCAATGGGGATTCTCCCACTGCAGCCATTCTCATCATTGGAGATGAGATACTCAAGGGTCAtacactggacacaaacagcGCCTTTCTGACACGAGCACTAAGAAAGCTCGGAGTGTCTGTGCAGCGCATAACCGTCATACCAGATGTACAGGAGGTCATTGCCAAAGAGGTGGCCTTCCTTTCCCCTCAGTTTACACACCTCATCACCGCAGGGGGCATAGGCCCCACCCATGATGACGTCACCTTTGAGAGCGTTGCCATGGCATTCCAAGAGGAGTTGTATCCCCACCCTGAGCTCACCCGACTGGTTGAGGAATTCTTCGGGGTGTTGGATAAAAACCGTGCTGCTATGAAGCTGGCCATGGTGCCACGCTCATCCAAACTCAACTATGGAACTGACCCTCAGACTGGACAACTGCTCCGCTACCCACTGGTCAGTGTGCGTAACGTGTTTATCTTTCCTGGGATCCCGTCTCTGTTGGAGAGGGCCTTCAATGGGCTGGAGCACCTCTTTGCTGGTTCAGGAACCACTTTTCACACCCGTGAGGTGTTTGTGGATGCAGACGAAGCAGAGATCGCCCCTGTGCTGACCAAACTGCAGGCTGATTGGGGCCGGAAGGTGGCTCTTGGCTCCTACCCTGACTGGTTGAGCAACTATCACAGAGTCAGGCTGGTCCTGGACTCTGATAGCCAGGAGGAGGTGAACAAAGCCCAGGCACGGCTGCTGGACGAGCTGCCAAAGGGAAGCGTGGTGCCCTTAGTCACTGACCCGGTGTCCATCGCCACTTCTGAGGTGTACACACTGGCCAACAGCGGCACAGCGTTGGGTGATAAAGTTATGTCTGCGCTGAAAACGATAGAGGCTGCACTGGATCAGTATTCGACAGAGGAAGTCTGCATCGGCTTCAATGGAGGCAAAGACTGCACAGCGCTGCTCCATCTCTACTATGCAGCACTGAAACGGCGATATCCAGATGGTAAAGACAAGGTGAAAGCCCTGTATATCCGAATTGTCGCTCCATTCCCAGAAATGGAGAGATTCCTTCAAGACACGATAAAAAGATATGACTTGGAGATATTCTCTGTGGAGGGCAGTATACGGCAGGCGCTGAGCGAGGTGCAGGAGAGGAGACCGGAGCTGAAAGCTGTCCTGATGGGCACCAGGAGGAGTGACCCctactcacacactctcacagccATGTGTCCCACTGACCCCGGCTGGCCAGACTACATGAGAGTCAACCCATTACTAGACTGGACGTATCATGACATCTGGTCGTTCTTGAGGATGTTACATGTGCCCTACTGTATTCTCTATGATAAAGGATACACTTCACTGGGCAGTATGGACAACACCTGTCGAAACACTTCCCTCCAGATGGTGGATGAGAGGGGGGTGACACGATACAAGCCGGCCTACCTCCTGGAGAACGAAGAAGAGGAGCGAAACTCCCGTGCCTAATGTAGTCTCACTTCTCACCATGTGACCTGTTGTTGATGGAGCCCGGATTTCAGATCTCTGGTCAACCcctacacacatatacaactgAAAACGAAAcgtagacatttaaaaaaaacaaaaacgtttgTGCACAAGTatcagacctaatgacctcagcgtcacaagaattagaggag
>XM_039807230.1
CTAGTGCCTCTAACTCTGGGTCAAGTAACCTAGCAAGGATACTTGCTAGATTtatagttaacgttagctaagatTTGTCATATAACTACCTGACTCTTTGGTTGATGTTAAGCGACAATTTGTGGTAACGTTAGTTTCCTTATACATTTGCAAGAGGTTCAGTTCATATTTCGTCGGGATACTCCCTGGTAGGAGACAGgttatgaagaagaagaagaaggcctgaactgtaatgaaacattttgGGATACTCCATATGGATTCTTCATGTTGACcCTTGCTTTTCCCAAACTGAGTAGAACATTGGTGCGAGTGAGGAGACTGGCGGCTCAGCTCTCCAAAGCAACCATGTCTACAAACCTCCAGGGCTCCAGTCCGTCCTTTGCAGCCAATGGGGATTCTCCCACTGCAGCCATTCTCATCATTGGAGATGAGATACTCAAGGGTCAtacactggacacaaacagcGCCTTTCTGACACGAGCACTAAGAAAGCTCGGAGTGTCTGTGCAGCGCATAACCGTCATACCAGATGTACAGGAGGTCATTGCCAAAGAGGTGGCCTTCCTTTCCCCTCAGTTTACACACCTCATCACCGCAGGGGGCATAGGCCCCACCCATGATGACGTCACCTTTGAGAGCGTTGCCATGGCATTCCAAGAGGAGTTGTATCCCCACCCTGAGCTCACCCGACTGGTTGAGGAATTCTTCGGGGTGTTGGATAAAAACCGTGCTGCTATGAAGCTGGCCATGGTGCCACGCTCATCCAAACTCAACTATGGAACTGACCCTCAGACTGGACAACTGCTCCGCTACCCACTGGTCAGTGTGCGTAACGTGTTTATCTTTCCTGGGATCCCGTCTCTGTTGGAGAGGGCCTTCAATGGGCTGGAGCACCTCTTTGCTGGTTCAGGAACCACTTTTCACACCCGTGAGGTGTTTGTGGATGCAGACGAAGCAGAGATCGCCCCTGTGCTGACCAAACTGCAGGCTGATTGGGGCCGGAAGGTGGCTCTTGGCTCCTACCCTGACTGGTTGAGCAACTATCACAGAGTCAGGCTGGTCCTGGACTCTGATAGCCAGGAGGAGGTGAACAAAGCCCAGGCACGGCTGCTGGACGAGCTGCCAAAGGGAAGCGTGGTGCCCTTAGTCACTGACCCGGTGTCCATCGCCACTTCTGAGGTGTACACACTGGCCAACAGCGGCACAGCGTTGGGTGATAAAGTTATGTCTGCGCTGAAAACGATAGAGGCTGCACTGGATCAGTATTCGACAGAGGAAGTCTGCATCGGCTTCAATGGAGGCAAAGACTGCACAGCGCTGCTCCATCTCTACTATGCAGCACTGAAACGGCGATATCCAGATGGTAAAGACAAGGTGAAAGCCCTGTATATCCGAATTGTCGCTCCATTCCCAGAAATGGAGAGATTCCTTCAAGACACGATAAAAAGATATGACTTGGAGATATTCTCTGTGGAGGGCAGTATACGGCAGGCGCTGAGCGAGGTGCAGGAGAGGAGACCGGAGCTGAAAGCTGTCCTGATGGGCACCAGGAGGAGTGACCCctactcacacactctcacagccATGTGTCCCACTGACCCCGGCTGGCCAGACTACATGAGAGTCAACCCATTACTAGACTGGACGTATCATGACATCTGGTCGTTCTTGAGGATGTTACATGTGCCCTACTGTATTCTCTATGATAAAGGATACACTTCACTGGGCAGTATGGACAACACCTGTCGAAACACTTCCCTCCAGATGGTGGATGAGAGGGGGGTGACACGATACAAGCCGGCCTACCTCCTGGAGAACGAAGAAGAGGAGCGAAACTCCCGTGCCTAATGTAGTCTCACTTCTCACCATGTGACCTGTTGTTGATGGAGCCCGGATTTCAGATCTCTGGTCAACCcctacacacatatacaactgAAAACGAAAcgtagacatttaaaaaaaacaaaaacgtttgTGCACAAGTatcagacctaatgacctcagcgtcacaagaattagaggag

Function

symbol description
flad1 Predicted to enable FMN adenylyltransferase activity. Predicted to be involved in FAD biosynthetic process. Predicted to be located in cytoplasm. Orthologous to human FLAD1 (flavin adenine dinucleotide synthetase 1).

NR:

description
PREDICTED: FAD synthase isoform X2

GO:

id name namespace
GO:0006747 FAD biosynthetic process biological_process
GO:0006777 Mo-molybdopterin cofactor biosynthetic process biological_process
GO:0003919 FMN adenylyltransferase activity molecular_function

KEGG:

id description
K00953 FLAD1; FAD synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807229.1 True 2245 mRNA 0.51 11 21890529 21900652
XM_039807230.1 False 2027 mRNA 0.50 11 21891078 21900652

Neighbor

gene id symbol gene type direction distance location
chrnb2 chrnb2,LOC102780733,LOC104959165 coding upstream 55178 21818053 ~ 21835351 (+)
she LOC101483326,LOC102307252,LOC102202678 coding upstream 72307 21805074 ~ 21818222 (+)
c7h1orf43 LOC104934460,LOC104959162,LOC103388199 coding upstream 122676 21764475 ~ 21767853 (+)
znf687a NA coding upstream 211671 21668490 ~ 21678858 (+)
LOC120563136 LOC103361607,LOC104959159 coding upstream 222698 21661202 ~ 21667831 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding downstream 74540 21975192 ~ 22033267 (+)
efna1b efna1,LOC104918192 coding downstream 168354 22069006 ~ 22080302 (+)
LOC120562069 tmem107 coding downstream 207291 22107943 ~ 22110135 (+)
krtcap2 krtcap2 coding downstream 209864 22110516 ~ 22113062 (+)
s100a10b LOC104962190 coding downstream 213467 22114119 ~ 22115560 (+)
LOC120562851 NA non-coding upstream 164824 21724948 ~ 21725705 (+)
G74288 NA non-coding upstream 598149 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 600215 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 601154 21289171 ~ 21289375 (+)
G74274 kiaa1429,LOC104941925 non-coding upstream 646962 21243229 ~ 21243567 (+)
G74673 NA non-coding downstream 135626 22036278 ~ 22036659 (+)
G74729 NA non-coding downstream 214964 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 219086 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 229000 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 283131 22183783 ~ 22184037 (+)
G74633 tuft1,LOC102781808 other upstream 120243 21769548 ~ 21770286 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 287071 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 474635 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 553864 21331412 ~ 21336665 (+)
sec61b sec61b,LOC102796100 other upstream 879115 21008013 ~ 21011414 (+)
slc50a1 slc50a1 other downstream 183017 22083669 ~ 22091963 (+)
LOC120561539 NA other downstream 231926 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 236895 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 239128 22139780 ~ 22154684 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other downstream 297060 22197712 ~ 22248527 (+)

Expression


Co-expression Network