LOC120563160 (LOC104935873)


Basic Information

Item Value
gene id LOC120563160
gene name LOC104935873
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36024626 ~ 36026571 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807298.1
tttgAAAAACACCCCTCTCACTCGCAAGGGACATGGTACATTCCACGACGCGTCACCCATTGTTTACAAATGAACTCGGATGGCTTGTTGGTTTACTGCTGAGCGGCGTGGTGAGagcgaggagcagcagcagcagcccggCGGCTCTCAGTCATACCGagaacaaaaacactgaaaaagccCACTCACAGAAACTCGACAACGTATCCGCCATTATGCCGTGTCGGAAGGAGAACTACATCTTTCTGGAGCAGTCCGTTACGGTCGGCTCCAAAGAAGTGGACGCGCTGGTTACGAAGATCGGCGAGGCGCTGCAGCTCCACAACAATAGCGGCGGCCACCAGAAGACGTCGGTGTCCGTGTCCATGTCCTGCCTACACGGGCTCaccggcggcggcggcggctcCGGCGTGGTCAAACCGGCAGCCATAATCGGCGGCAACGCCGGGGGAGCTCCATCGcaaaaacagaaacaccacGGCTGCTGCATGCGGCTCCGGAACCGGGGACACCGGGGGAGCAGCAGGGCAAGCCCCTATAACATCCCCGGATCTAACAGCGACCAGGACTGGGACCAAAAAATCAAACCGTGGAACAAAAAGAGGATCAACGTGGAGGAGGACGATCCGCACCGACTGCTGCAGGACTTAATTTTGTCGGGGAACCTGATTAAAGAGGCTGTGAGAAGGCTGCAGTTCTCCGGCGCAGACTGTGGAGATTTCCCCAAGACGGCGGACAGTGTGCCGTGCTGAGAACCGGTGTGTCTCCCCCCTTTTCCCCTGGATGGACACAACAAAACTGAGACTGTTTAGAATTAAATTTCacaggactgttttttttttatttacaggaCTGGTAGCTATGTCTTTTTAATTTCATGAATTTTTCAATAATTAGCAGTGAGCCTAGCTAGCTTACTTTAGCTCGCTAGCCACCCGGCTAATGAGCCGTGTTGTTTATGTTTGAATGTCTCCTTGTGGGTCAGACGACCGGGGGTAGCAGTGGAGCTCTGATCCGCCAGAAACTCATTTTTTACCGGCCTTTTCTTAAGAAATGACCATTATTTCACCCTTTTTAACGACTGATGTTGTCATCCTgtgatgtgatttaaaaaaacacagctcACACGGAGGATTTTTGTGTCTCCTGTGATTCCtgaacaatgtgttttttttgtttttttgatgaATGGTTGAGTCACAGTGAACAGTAACAGGAAGTCAAAgcctattcatttttttttgttttttttttaaccactgcATCCTGGAATTTCGTCCATGTGTTTCAGGGGTTTGGGAGGAAGGTTTGCCATTCCCATGCTGTGACAACAGACCGTTTTTATAATGTGAGATGTGGGGGTTTAGTAGTCCATTTTGTTTACTATCTAATGCTGGCTGTTAATGGCTGTagtcccctcctcctcctttattATTCTCATTTCAGGTTCTTCAGTGGGTTGTCCTTTAACTGACCTGGGAGCAGCTCAGGAATGTGggtttattttccaaaaaaaagcTGATGTTACAGGACAACACACTGCACCTCTTGTCAATGGCAGCTCTtctaaatagtttttttcttctcaagGGCGTCTAACATTTGcaggagaaggggggggggggtgcatgGGGAAAGAAGAGCAAACATGCCTGTTTCCCACAGGGCTTTGGGTGATGTGTAACTGTTTGTAATGGTTTTTTTCGGGGGGGGTGGGAGAAAAGGTTGGCCGTAACATGGCAATACTTTTTGTGGTGCTTTCACATTTTTGGAACTACTACGGagagttctgtttttttttttttttgtattcatttctTCTGTGTAAAGAAAAGACAATTGCCACTCCTGCTTCGTAACGAAGTATCTAATGATGTTCCTGAGTATtcagggtgttttttttgttgttgttgatgtctTAATAAACTTCTGTTTTTCCAAACTTC

Function

NR:

description
PREDICTED: GSK-3-binding protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807298.1 True 1946 mRNA 0.47 1 36024626 36026571

Neighbor

gene id symbol gene type direction distance location
LOC120562276 NA coding upstream 123734 35896350 ~ 35900892 (+)
LOC120562454 NA coding upstream 140691 35875127 ~ 35883935 (+)
LOC120562277 NA coding upstream 167890 35849473 ~ 35856736 (+)
LOC120562274 NA coding upstream 394545 35621760 ~ 35630081 (+)
ccne2 LOC103358269 coding upstream 477878 35535047 ~ 35546748 (+)
dek LOC102312342,LOC102210945 coding downstream 65628 36092199 ~ 36110132 (+)
LOC120563175 NA coding downstream 84479 36111050 ~ 36129242 (+)
LOC120563177 NA coding downstream 151636 36178207 ~ 36190415 (+)
nat16l NA coding downstream 334129 36360700 ~ 36367025 (+)
LOC120563182 NA coding downstream 342123 36368694 ~ 36383096 (+)
G78716 NA non-coding upstream 61121 35962773 ~ 35963505 (+)
G78707 NA non-coding upstream 95730 35928440 ~ 35928896 (+)
G78706 NA non-coding upstream 115557 35908820 ~ 35909069 (+)
G78705 NA non-coding upstream 116391 35908026 ~ 35908235 (+)
G78674 NA non-coding upstream 202985 35821290 ~ 35821641 (+)
G78736 NA non-coding downstream 7777 36034348 ~ 36034652 (+)
G78756 NA non-coding downstream 61302 36087873 ~ 36088096 (+)
LOC120563188 NA non-coding downstream 135209 36161780 ~ 36172164 (+)
G78776 NA non-coding downstream 262221 36288792 ~ 36289154 (+)
G78770 NA non-coding downstream 308546 36335117 ~ 36339554 (+)
LOC120562279 NA other upstream 136454 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 250638 35743295 ~ 35773988 (+)
G78594 NA other upstream 615944 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 1168094 34839157 ~ 34856532 (+)
G78200 NA other upstream 1480247 34529355 ~ 34544379 (+)
G78759 NA other downstream 84280 36110851 ~ 36190839 (+)
G78772 NA other downstream 231589 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 365681 36392252 ~ 36465230 (+)
LOC120562456 dennd4b other downstream 554394 36580965 ~ 36670029 (+)
LOC120562457 NA other downstream 659365 36685936 ~ 36703993 (+)

Expression


Co-expression Network