LOC120563172


Basic Information

Item Value
gene id LOC120563172
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33296250 ~ 33299540 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807321.1
tttttttttttgcacacaggGGAGAGGAGCCTATATAGAGCTGATAAGATGAGCGCTGAAGCCACTTCCACCAGCAGCTGTCAGCGTCAGTGTTCAGGAGAACGTTTGCATCTACTGTGTGCCAGCACGTAAAAACTTCACCGAAacactttaccctctgcccttCGACAACCCCTCCACACATCTTTGCCAACCTGATAACTGCAGTGATTTCTCTTTTTTGGGGAAAATGTCTCAACTGAAAACTGCTATGGCTATCCTCATCGAGGTGTTCCACTCCTACTCGGGAAAAGAAGGGGACAAGTACAAGCTGAACAAATCGGAGCTGAAGAACCTGTTAGAGACTGAACTTGAAATAGACGGCGGCGAAAGGCGCGAGATCAAGGATATGATGCGGGACTTGGATGCAGACGGTGACGGTGAAGTGGACTTCCAGGAGTATGTCACTATGGTTGCTGCAATGACCATGGTCTTCAATGAGTTCTTCCAAAAATATTGAGAGCAAGAACACCCTGATTAGATTTAAGAAACACTAAGTCTAATATTTCACATTAAATCAATAACCCTTTCTTTACATTTATATACTAAGAATGTTATTTTGGGGAAGCAACTTGTAATAATATTATATGTAATGACgtaatatatatgtaatatatacatCACTGCAAACAAACTCAAGATATTCTTGCCATTTTGCCTCCATCTAAATAAAGATCACGTCCTGTTTT

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807321.1 True 728 mRNA 0.41 3 33296250 33299540

Neighbor

gene id symbol gene type direction distance location
ctsk ctsk,LOC107086845,LOC106920373,LOC103156711,LOC106949137,LOC103477640 coding downstream 143207 33134110 ~ 33153043 (-)
LOC120562448 NA coding downstream 165691 33115217 ~ 33130559 (-)
mcl1b NA coding downstream 275175 33018705 ~ 33021075 (-)
tmod4 tmod4,LOC102789303 coding downstream 350022 32915320 ~ 32946228 (-)
lysmd1 NA coding downstream 390777 32902016 ~ 32905473 (-)
atg5 atg5,LOC102785391 coding upstream 216154 33515694 ~ 33556965 (-)
LOC120561933 NA coding upstream 268318 33567858 ~ 33581386 (-)
eaf1 eaf1 coding upstream 580233 33879773 ~ 33893809 (-)
capn7 capn7 coding upstream 748898 34048438 ~ 34081401 (-)
LOC120561745 NA coding upstream 844634 34144174 ~ 34146909 (-)
G77984 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC107717776 non-coding downstream 9658 33284913 ~ 33286592 (-)
G77959 NA non-coding downstream 163717 33132243 ~ 33132533 (-)
G77949 NA non-coding downstream 194713 33099816 ~ 33101537 (-)
G77910 NA non-coding downstream 401460 32867146 ~ 32894790 (-)
LOC120562114 NA non-coding downstream 477704 32784245 ~ 32818546 (-)
G77994 NA non-coding upstream 160482 33460022 ~ 33460244 (-)
G78064 LOC103362578,LOC107379244 non-coding upstream 185768 33485308 ~ 33486895 (-)
G78061 NA non-coding upstream 266255 33565795 ~ 33588250 (-)
G78084 NA non-coding upstream 421141 33720681 ~ 33720916 (-)
G78094 NA non-coding upstream 437645 33737185 ~ 33871792 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other downstream 263355 33022098 ~ 33032895 (-)
sema6e sema6c,LOC103360390,LOC104932808,LOC100704625 other downstream 651281 32480644 ~ 32644969 (-)
LOC120561540 LOC104957162,LOC106526711,LOC102237165 other downstream 861383 32425365 ~ 32434867 (-)
tbx20 tbx20 other downstream 1305885 31976484 ~ 31990365 (-)
LOC120562592 dgkb,LOC102796570 other downstream 1669369 31612436 ~ 31626881 (-)
LOC120561932 NA other upstream 290981 33590521 ~ 33602948 (-)
LOC120561752 NA other upstream 795711 34095251 ~ 34097590 (-)
G78245 NA other upstream 796103 34095643 ~ 34146296 (-)
LOC120561744 NA other upstream 829998 34129538 ~ 34132432 (-)
LOC120561747 NA other upstream 961986 34261526 ~ 34273652 (-)

Expression


Co-expression Network