dek (LOC102312342,LOC102210945)


Basic Information

Item Value
gene id dek
gene name LOC102312342,LOC102210945
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36092199 ~ 36110132 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807323.1
GGGGAGTAGACGCCGCAGTAATCCCCGCCCCCCAGAGAAACCGCCATCATGAAATTGAAAACAAGAAACTAGAGGAGAGACGCGCACAGTCCACTCTGCTTCACAACAACAAGGATTAATCAGACGGACTGAGGCGGTGCGATATGAGTGAGGTTGCGGAGGAAGCGAGGTACAGCTCTGCAGTGTCAGAGGAAGAAGTGGAGGATCCGATGGAGACGTCGCAGCAAGACCTGGCGAGTCCGAAGAAAAGCAGCGCCAAAATATCTGGCGAAATCATCGAAGGCAAGCGGGCAAAGAAGACAGTCGAGAGGCTTGACTTCCAGGCACCAAAGCAAAAGGAGAAGCTCAAGACTGGCGATGGTAGCGGAGATAAATTAGGAGACATTCCACGTATCGGCTTCCAGATCAATAAGATAAAGGCAGCTGACCTGAAACCTCTACACGCCATCCTGTTCGACAGACAGGGAAAGATGGCCCTGTTAAAGAAGAACTTGCGTCTGTTTAACGGCTTTCCTTTTGACGCCGACAGCGAACAGTACACCAAGAAACGAGAAAAACTCCTCAAGAATTCAAACTTGACCAACAGCAAACTGAAGGTTGTCTGTGGTGTTTTGGATCTGGAGAAGAAAGGAACCCACGCCGATCTGGTCGACAGGATCCTGAATTTCCTCATTGAACCGAAAAACAGCGGGAAGCGTCTGCCCgtgaagaaaaagaggatcaAAAAGAAACTGTCCGGCGACGACTCCGAGACCAGCACCAAGAAGAAGAGCAAACCCAAACCCAGAAGCTCGTCCTCCAGTCCCAAGAAGTCCAAAGCCGGAAGCAAGTCCAAAGCCATCGTCATGGACTCCAGCAGCGATGATGATGACGGTGAGGAAGATGAGAAGGCGGCGGCTTCAGCTGAGGCTGAGGGATCGGACGCAGAGGACAAACCATCCGAGAAAGAAGACGGGGACCACTCCGACAAGTCAGAGGAGTCtgctgaggaagaggagaggaggaaggaagaagaagaggaggaggaggaagacgatGATGAGTCTCCCAAATCAAAGTCCAGCAGAGGGAAGTCTGCTTCCAAGAAGTCGGCCCCGGTGAAAAGACAGAAGCCGCCGGCAAAGAAGACGGCTCCTCCTAAAAAGAGAGCGAAGAAGGAAGTTTCAGACGCGTCCGAATCGGACGCCGACAGTGAAGCTGAGGAGAAGCCCAAAAAGAAGAAGTCGACTCCAGCCAAACGTGCCGCCAAAACCAAGAAGGccgacagcagcagcaacagaaaaaacaacacaaacacagCCGAGGACAGTTCAGACGACGACGAGCCGCTCATCAAGATGGTGAAGAAGGCGCCGACAGACGAGCAGCTGAAGGAGACGGTGCAGAGTCTGCTGAAGGAGGCCAACCTGGAGGAGATGACCATGAAGCAGATCTGCCAGAGGGTGTTTGACACCTACCCAGACCACGACCTGGCCAGCAAGAAGGACTACATCAAACAGACTGTTAAATCTGAACGGAGCCAGCAGAGTGCGGTGCCACTGACGTTGCAGTAGGTTTCCAGTCGGGACAGGAGGATGGAGTGGTTGATGGTGTCGAAGGCTGCAGTGAGGTCGAGCGTGATAAGAATGCTCATCACATGAAGATCTGAAGAAGAATGAAGTTGTAGAAGCTGCGAAAACATCACCAGAGGGAAATCTTCATTAGtttcatgtttgttttcatACAAAATAGTTTTATACATAattatgtttgttgttttcattaACGTGTGACTTGTGTTTAGATTTTCAGCTTAACTCGACAGCAGTTGTCACCACCATGTTCAGTGTTTTCTGGCAAAGTTAGATTTTATgagaaattatgttttttacacTTTCAGTGACCAGAAGTTCAAATGTTTTCCTCTTTTAGTCGTCCCGTTTCGGCagcagaagaaaagagtccGACTTCTCTTTATTTCTGCTTTTCACTGACAGAAATTTACCCTTTTTATTTCTGGATTAAGATTTGTAAATATGTTTCTAATTAGGTGAAGCTATTTTTTGATTGACAAACTTTAACTCGTTATTTTCTAGGATTTCCTggatttatagttttatttttttccttttggttgtttttcttCGTCAGATGTTAATTCATTGTTGAGTAATTTACTTGCTGATGATTAAAAGTGTACATTTTTTTGAACAAAA

Function

NR:

description
PREDICTED: protein DEK-like

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG:

id description
K17046 DEK; protein DEK

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807323.1 True 2195 mRNA 0.47 15 36092199 36110132

Neighbor

gene id symbol gene type direction distance location
LOC120563160 LOC104935873 coding upstream 65628 36024626 ~ 36026571 (+)
LOC120562276 NA coding upstream 191307 35896350 ~ 35900892 (+)
LOC120562454 NA coding upstream 208264 35875127 ~ 35883935 (+)
LOC120562277 NA coding upstream 235463 35849473 ~ 35856736 (+)
LOC120562274 NA coding upstream 462118 35621760 ~ 35630081 (+)
LOC120563175 NA coding downstream 918 36111050 ~ 36129242 (+)
LOC120563177 NA coding downstream 68075 36178207 ~ 36190415 (+)
nat16l NA coding downstream 250568 36360700 ~ 36367025 (+)
LOC120563182 NA coding downstream 258562 36368694 ~ 36383096 (+)
LOC120563185 NA coding downstream 418349 36528481 ~ 36541530 (+)
G78756 NA non-coding upstream 4103 36087873 ~ 36088096 (+)
G78736 NA non-coding upstream 57547 36034348 ~ 36034652 (+)
G78716 NA non-coding upstream 128694 35962773 ~ 35963505 (+)
G78707 NA non-coding upstream 163303 35928440 ~ 35928896 (+)
G78706 NA non-coding upstream 183130 35908820 ~ 35909069 (+)
LOC120563188 NA non-coding downstream 51648 36161780 ~ 36172164 (+)
G78776 NA non-coding downstream 178660 36288792 ~ 36289154 (+)
G78770 NA non-coding downstream 224985 36335117 ~ 36339554 (+)
G78798 NA non-coding downstream 287917 36398049 ~ 36415884 (+)
G78813 NA non-coding downstream 336515 36446647 ~ 36507814 (+)
LOC120562279 NA other upstream 204027 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 318211 35743295 ~ 35773988 (+)
G78594 NA other upstream 683517 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 1235667 34839157 ~ 34856532 (+)
G78200 NA other upstream 1547820 34529355 ~ 34544379 (+)
G78759 NA other downstream 719 36110851 ~ 36190839 (+)
G78772 NA other downstream 148028 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 282120 36392252 ~ 36465230 (+)
LOC120562456 dennd4b other downstream 470833 36580965 ~ 36670029 (+)
LOC120562457 NA other downstream 575804 36685936 ~ 36703993 (+)

Expression


Co-expression Network